CI01000091_00390010_00390965


Basic Information

Item Value
gene id CI01000091_00390010_00390965
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 389933 ~ 391062 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000091_00390010_00390965.mRNA
ATATAAAAACTGAGTTTGCTAGTTTTGGGTTTGCCAGTGCAGGCTGGTTTTGCACTATCCTTACAAGATTTCTACCAATGTGGAAAGTAAGTGGAAGGGTGGAAAACACCACAACAACACTTCCATTGTACTGGGATGGAGTGTGGTTAAACTGGCAACACCACACAACTGGAAGGCTTCACTGCACCTTCTATCAGTCTCTGCTATTTCTGACTGAACATTTCAACACCTGGAAAATCCTCATCATCACATCTATTGGAATGGGAGTTATTGCCATGGCAGTTTACGCTATTGGGTGGATACATTATCCTAGGAATATATGGTTTAAAGCTGCCTCCGGGCCATTGTTTGTTGTAAGTGGGCTGCCGTTACTGGTGGTGGTATCCTGGACTACACATTTAACAGATTCGAATGCTAATGTCTTATTAACACGGGAATGGGGAGCAGCGATCTTCACTGGCTGGTTGGGCGTAGTGTTGCTTAAGCAGACTATATGCATCAGAGGCGTATTGCTGCCCTCCTCAGTTCATATGAAGAACTACACCTAATAGGTCATATCCTTATATAAAGTCCAGTTCGATGCAAAAAGATTATAACAACCTTAATTGTCTCACAGTCCTTAGTACTAAGAATTGATTTTGATGA

Function

NR:

description
claudin 13

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000091_00390010_00390965.mRNA True 645 mRNA 0.42 2 389933 391062

Neighbor

gene id symbol gene type direction distance location
CI01000091_00382012_00384325 CLDNJ coding upstream 5344 381775 ~ 384589 (+)
CI01000091_00375689_00376318 CLDNE coding upstream 13294 375407 ~ 376639 (+)
CI01000091_00370016_00370645 CLDNE coding upstream 18889 368980 ~ 371044 (+)
CI01000091_00368135_00368878 NA coding upstream 20994 368135 ~ 368939 (+)
CI01000091_00366037_00366669 NA coding upstream 22729 366037 ~ 367204 (+)
CI01000091_00438822_00455209 CUL3, CUL3B, CUL3.L coding downstream 47760 438822 ~ 455353 (+)
CI01000091_00457499_00460775 NA coding downstream 66437 457499 ~ 462653 (+)
CI01000091_00607895_00625729 SBDS, SBDS.S coding downstream 216528 607590 ~ 625944 (+)
CI01000091_00784583_00790474 NA coding downstream 393201 784263 ~ 790484 (+)
CI01000091_00791956_00794999 NA coding downstream 400498 791560 ~ 795003 (+)
G302630 NA non-coding upstream 42960 344248 ~ 346973 (+)
G302636 NA non-coding upstream 54843 334525 ~ 335090 (+)
G302634 NA non-coding upstream 56001 333688 ~ 333932 (+)
G302631 NA non-coding upstream 81781 307932 ~ 308152 (+)
G302611 NA non-coding upstream 120238 269406 ~ 269695 (+)
G302653 NA non-coding downstream 2624 393686 ~ 393891 (+)
G302680 NA non-coding downstream 200031 591093 ~ 591568 (+)
G302688 NA non-coding downstream 222152 613214 ~ 613703 (+)
G302690 NA non-coding downstream 224343 615405 ~ 615789 (+)
G302696 NA non-coding downstream 245462 636524 ~ 636744 (+)
G302512 NA other upstream 327766 59635 ~ 62167 (+)
G302679 NA other downstream 195850 586912 ~ 589526 (+)
G302768 NA other downstream 564848 955910 ~ 957032 (+)
G303132 NA other downstream 661561 1052623 ~ 1053014 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008933 NA non-coding NC_007126.7 CM002899.2 2618279 ~ 2625928 (-)