CI01000091_00400737_00412559


Basic Information

Item Value
gene id CI01000091_00400737_00412559
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 400440 ~ 412559 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000091_00400737_00412559.mRNA
ATGTTTAACTCTCATGTCCAGTATGGATTCATCAACACATGTTTGAAGTCTCTAGTGATTGACAGATTTGGAGAAGAGACGTGGGACAAACTTAGGGATAAGGCAAGGGTTCAAGACACCTTTATGACTTATGAAGTGTACTCAGATAACATCACCATGCAATTAGTGACAGAGGCCTGCAAGATGCTTGACCTTGAACAAAGTGTGGTGCTAAGGCAGTTTGGAGAATACTTCTTTGAATTCTGCAAAAAGTCTGGATATGATCATATGTTGCGCACCCTTGGAGGAAATCTGTTTGAGTTTATGGAGAATCTGGATTCACTGCACAGCTATCTCTCTCTTTCCTACAAGGAAATGAATGCACCATCATTCCGTGTAGAAAAAAACAATGACGGCACCTTGCTGCTACACTACTACTCAGACCGACGAGGTCTTTGTCATATTGTCCCTGGTATCATTGGAGCTGTGGCCAAAGACTTCTTCAACAGCACAATAAAGATGGAAATTGTGAACCAGATAGAGGAAGTTGAGAGGATGGGGAAAAAAGAGCATGTTGTTTTCCTCATCACACAGGGCCCAGTGTTCTTTGTAAAAGACTTTTCTGAAAGGTCCCTCCAGAAGAAGTCTCAAAATCAAGTACAGCAAAACCACTGGGGCACAGTCAGAAGCTTGATATATCCAGAAGAGGATAAAACTTTAAGGGTATTTGAGCCTGTGTACCCAGATAATCTCTGCATAGATATGAAGACATTTTGCAATGCCTTCCCTTTCCACATTGTGTTTGATGAAGAGGTTAGACAGGCAGGGGTGACTATTCAGAGAATTGTACCAGAGTTACAGACCAGGTGTGGCCAGCTGGATAAATATTTCACCATCCAGAATCCACAGGTGACTTTCAACATCTGCAGCATCCTCAAGTTCATTAATAGCCATTTTATTTTGCGGACAAAAAGAGATATAATGCCTGTGGCTTGGAAAGAGAGACCCATGCTAGAACTGAGAGGACAAATGATATGGATGCCTCCGTTGCGTTGCATGCTGTACCTAGCTTCACCATTACTTCGCAGCTTGCAGGAGCTAGAGGAGCACTGCATGCACCTCTCTGATATTGCTCCACATGACGCTACACGTGATCTGATCCTGCTTAACCAGCAGCGTCTAGCAGAGATGGAGCTCTCCAACCAGCTAGAACGGAAAAAGGAAGAGCTGCATCATCTCTCCAAACACCTTGAGGAAGAAAGGCAAAAGACAGAGAATCTTCTCTATGCCATGCTGCCCAAACATGTTGCCAATCAGCTGAAAGAGGGCAAGAGAGTGGAGGCAGGTGAGTTTGAAGAGTGCACCATCCTCTTCAGTGATGTGGTGACCTTCACAAATATCTGCGCTGAGTGTGAACCCATCCAGATTGTTTCCATGCTCAATTCTATGTACCTGAAGTTTGACCGTCTTACTTCTGTACACAATGTTTACAAGGTTGAGACAATTGGAGATGCTTACATGGTTGTTGGTGGTGTACCAATCCCAATGTCAAGTCACACTGAGCGTGTGGCCAACTTCGCCATAGGCATGATCATAGCTGCAAAAGAAGTCACCAACCCTGTGACTGATGGCCCTATTCAGATTCGGGTGGGCTTGCACAGTGGGCCAGTCTTGGCAGGGGTGGTTGGTGAGAAGATGCCTCGTTACTGTTTGTTTGGAGACACAGTTAACACGGCTTCCCGAATGGAGAGTCATGGCCTGCCTGACAAAATCCACATTAGTCCCAGTGTTTATCATGCTCTAAGAAATAAAGGCTATCAGATGGAGGAGCGTGGAGAGATAGAGGTGAAAGGTAAAGGAAGAATGCAAACCTACCTCCTACAGAGGAACCTAAAAGTCACAGATAGTGAGATCATGGGACTTTTGGTGCACAACGCTGACTCAGTCAGGAAGATGACTTATTCTGGCAGAGACTGTGCTTCACAGCTACCTCACTATAGGCCAGCATTAAAAGCTACCCAAAGACTGCAGAAAGAAGACAGTTGTCCATTGGTTCCAATGAAATATGGAGATAGTCCAACAGAGAGCAAACCTCCCGCACAGTTTACTGAACCTCAGCAAAGCAGTATAACAGGTAAACCACGAGATTCTGAGAGTTATGGGAGTCTTTACAGTGAGAAAAGCTCTTTGGACGTGCCCTCTGAGCTCACAAAGGAGAGCACACACAACAAGACTGACAATAAGAAACCTTCAATTGATAAACGCAGCAGACATGTTCACACGAGGTTCTGTTTGTTATTCTGATCTGTTTCTTGAGCCCAGATCCACTGTGTTATACTGTAACTTTAAAGTGTTTAATATAATGGTAATATGAAAAAAAGGCTGTCTGAAACAAGCTAATAGACATACTAAATTATTTTTAGTATTGTCTACACTGTTAATGTTTCAGCTTTTTTAGCCTTAGACATACAAGCTAATAGACATACTAAATTATTTTTAGTATTGTCTACACTGTTAATGTTTCAGCTTTTTTAGCCTTTAGATGAGTGTCTTTGTTTTACCTTTTTGTAAAACAGGGAAGCAAAACCTAACAGAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000091_00400737_00412559.mRNA True 2580 mRNA 0.43 15 400440 412559

Neighbor

gene id symbol gene type direction distance location
CI01000091_00348777_00349430 NA coding downstream 50711 348467 ~ 349729 (-)
CI01000091_00346274_00346930 NA coding downstream 52930 346017 ~ 347510 (-)
CI01000091_00337653_00338300 CLDN3A coding downstream 61853 337647 ~ 338587 (-)
CI01000091_00265846_00269683 NA coding downstream 130080 265840 ~ 270360 (-)
CI01000091_00108499_00117102 CDKL1 coding downstream 281331 108220 ~ 119109 (-)
CI01000091_00465845_00496451 MMP28 coding upstream 52437 464996 ~ 496600 (-)
CI01000091_00502517_00506846 NA coding upstream 89958 502517 ~ 506846 (-)
CI01000091_00522844_00581962 POR.L, PORB, POR coding upstream 109392 521951 ~ 581962 (-)
CI01000091_00637317_00642235 NA coding upstream 224609 637168 ~ 642235 (-)
CI01000091_00649152_00693081 DOCK10 coding upstream 235881 648440 ~ 693081 (-)
G303019 NA non-coding downstream 9475 369963 ~ 390965 (-)
G303017 NA non-coding downstream 31275 368087 ~ 369165 (-)
G303005 NA non-coding downstream 66508 333688 ~ 333932 (-)
G303002 NA non-coding downstream 70972 329224 ~ 329468 (-)
G302970 NA non-coding downstream 159147 241060 ~ 241293 (-)
G303077 NA non-coding upstream 214432 626991 ~ 627441 (-)
G303123 NA non-coding upstream 600901 1013460 ~ 1013753 (-)
G303133 NA non-coding upstream 639964 1052523 ~ 1052915 (-)
G303138 NA non-coding upstream 647987 1060546 ~ 1060765 (-)
G303148 NA non-coding upstream 662821 1075380 ~ 1075589 (-)
G303047 NA other upstream 62043 474602 ~ 562944 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008932 NA non-coding NC_007126.7 CM002899.2 2598804 ~ 2611170 (-)