CI01000091_00637317_00642235


Basic Information

Item Value
gene id CI01000091_00637317_00642235
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 637168 ~ 642235 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000091_00637317_00642235.mRNA
ATGGAACGTATGAAAGAGCTAGTATCAGAATTAAAAGGATGGTGCCGTGGCGAGGCATTAGACGAGGCTCATGCAGTCCTGGTGCTCATTCGAGAAGATGTAGACACAAGTACAATAGAAGAGACAATGCAAACTGTGAAGTATTTGGGATGTGTGCGAGTCAGAGGCCAAACTTTCAACAGTCAACTAAACCGATACCTGGTCTTGTGTGAATATGCAGCTACCCGAGCCAGTACACAAGTTTATATGTCCGAAACGCAACAAGCTCCAGGTAAACATGTTGAAGACCTTCGCACATTGTTCTCTGAAGATGAAGCTGCTGCCAAGTCAACAGAGGCCATCCTGCAAGCTGTGAGCGATTTACTTGACAAGACATCTAAGTCCTCCAGTGAGCATGGAAGTTATCACTGCCTACAAACTTTCTCTGGGTTGTTGCCCACCCCAGCTGGAGAAGAGCAGTTCGACCACTGGTTGGGTCAAGCACGGCTCATGGTGGAAGAGTGTGACTGCTCTCACAAAGAGAAGAGGCGGAGACTGATGGAAAGTCTCAGAGGCCTGGCACTTGACAGTGTAAAAGCAGCACGAGCCAGTGATCCTGATGTGGGCCCCGAAGACTGCTTAGAGGCCCTGGAGCATGCTTTTGGGACAGCAGAGTCAGGAGAAGAGTTGTATTTTGCATTTCGTTTACTGCAGCAACAACCAGGTGAGAAGCTGTCTGACTTCCTCAGATGTCTAGAACAGTCATTGAATAGGGTGGTGCAGAGAGATGGACTCCCCCTTGGATGTGCAGATAGAGCAAGACTCGACCAATTGTTGCGTGGTGCGATAGCCTCAGATCTGATGTTAGGTAACCTTCGTTTGAGAGAGAGGAGAGCAAAGCCCCCAACCTTTCTCCAGCTGTTAAAGGAGATACGCACAGAAGAGGAATATGAGGCCTCACGAAAGAAGATTACTCCTGTCATGCAAGGTGGAAATGTAAGGCAGAATGCTGATGTGAAACAGACGGAAATTCAGAACTTGAAGTCTGAGATCAAAGAACATAAGGCCTTGATTGCTGCTATCGTGTCTAAGCCAGCTCACGACACTTCAGTTAGCAGTGAGAAAATTCCCCCAAATGTAGTGTACAATGAGTGCAGTTCGGACAGTGAGATAGCAGCTTTGAAAAAACAAATGAAGCGCTTGCAAAAGAAAGTAACAAATAAAGTAGCTGAACCGCAAGCTGCCGTTTTGAGGAAGTGCGAAAGCCCAGAAAACCAGGCTAAAGTTATCAAGAGACTTATCCAAGCTCTGAAGCTGTCCAAGTACAACCAGCTGTCAAGTGATGCCACCGCTAATGCAGTTAACTGTTCTGTTGAGAAAAGTACAGCTGACATGCATGAGGGTGTGCCTATTCCTGATGGGTTAGTTGGGCCGCCTTGCCTGGTGCCGCTGAAGGTTAATGGACAACCCTGCACTCCTTTGTTAGATAGTGGCTCTCAGGTGATGATAATTTTTGAACCCTGGTACCTGAAGCACTTGTCTGATATCCCCATTCAGCCAGTATCTGGTCTTTCCCTGTGGGGTTTAAGTGAGTCTGGAGCTAGCTACCCTTACCGTGGCTACGTGGTAGTTGATGTGGAGTATCCAGCTGAGGTGTTAGGAACCAGTCAGACTGTAACTGTCCTAGCTCTCATATGTCCTAACCCTAGGACTGAAGATAAGAGGTCTGTCATTGTGGGCACCAATGCGAGCCATGTTAGTCGTTTGGTGAATCAATGCAAAGATAATGGCATTGATGTCACCAGAACGCTAGGCCTTCGTGTTCATGTTGAGGAAGATCAACCTGCTCTAAAGGGTGTCGTGGTCCCAGTCCAAGAGGAGGAGGCTGGCCGTGTCCGATGGATGGGTCCAGGCCCCTTGATCTTACCCCCAGATGGTGACACTCAGGAGACTGCTTCCTCTGACTTTGATGAGAGCATGATCAACTTTGGGGAATCCCCTATCTCAAAACAATGGAAGAACAGATTATGTAAGAAACTGGCTCAGAAGTCTCATGTATTCTCAATGCACGGGTGGGACGTGGGATTAGCAAGAGGAGTAGAGCACAGAATCCGCACCATACCTGACCAGTACACAACACCATGCATTGAAGATGCGCTGAATGCATTAACAGGGATGGACAAGTGCCAGATCTGTCTGCCAAGGGTCAAGTACCTGGGGCATATCGTTTCTGCAGATGGAGTTGCCCCAGATCCAAACAAGATTGAGGCTGTCGCTACATGGCCCATGCCAACAAACCTGAAGACGTTACAATCTTTCCTAGGATTTTGTGGTTATTATCGCAGATTCATTCAGAACTATTCTGAAATTGTTAGACTGCTGACAACAACCCGCTTACGAACATGCCAGAGGAGGATGACAATGGCTGGGAAGCTGGCAATGAAAGATGGATTACTGTACCGGTACAGCAAGAGACCATCCGGAGAGGTGATCAGTCAACTCTTCCTGCCGAGAGAGTTCCGGGAGATGGTTATGAAGGCCATGCATGATGACCTGGGGCACCTTGGACAGGAAAGAACTGTTGACCTGCTCCGAAGTAGATTCTTTTGGCCTAGGATGTCGATGCTAGTGGAAGAATTCATCAAGAACTGTGGGGAGTGTGTCACTCACAAGACCCCTATACAGAGAGCTGCTCCGTTGCACCAGATCGTAAGCCATGGGCCTATGGATTTAGTGTGCATGGACCTTCTTTCCATGGAGCCTGACTCCAAAGGCATAAGTAACGTGTTAGTGGTCACAGATCATTTCACGAGATACGCTCAGGCTTTCCCAACTAAAAGCCTGAAGGCCCATGTTGTGGCAAAGGTCCTAATTGAGAAATATTTCATACACTATGGACTGCCTTCAAGGATCCATTCGGATCAAGGAAGAGATTTTGAGAGCCGTTTGATCCGAGAACTGTTGACCTTGATGGGGATACGCAAGTCGCAGACAACGGCGTATCATCCGCAAGAAGACCCGCAGCCAGAAAGGTTCAACCGAACTCTGCTCTCTATGCTAAATGGCATAGAAGAGGCGTCTCACACCCGATATGTCACAAAGCTGAAGGAAGACTTGAAGCAAGCATACAAGTTAGACTCTGCAGACAAACGGCACAAGAGAAACAAGAGGTTGTATGATCGCCGAGTTACCTTTCAGTCCATAGAGATCGGCGACAGAGTACTGCTCCGGAATCTAGGCCTGAGAGGCAAGCACAAACTGGAAAGCAAGTGGAGTCCTGATCCGTATGTTGTTGTTGTTGGAAAGATGCCAAACCTACCTGTGTTCAAGATCAAACGGGAGGATGGAAGGCTAGGGACAAAGACTATACACAGGGACCACCTTCTTCCGATTGAACAGCTGGTGAGAATGCCACGTACTGACCAGGATGCTGATCCACCTGAGAAACCCAAGACCAGAGCAGACACTCATAAGAGAAGTCGAAGGGACCCAAGACCAGAGAATCAAGAGTTACAGGAGTTTTCTGATTCATCCTCTGACATGGAGTATTATGTCCCTCACTGTGTCACTCGGAGAGAGCCTGTCCCAAGGGTGCTAAATACTGCCAGGCCAGTAATCGAATTAGAAAATGATTCAAACCCAGAAGAGGTTGATCACAACTCTGAACCGGAACCCGAGGATGAGGAGTGTGATCCAGAAGTAGCTCCGGAAGAGTCTAGTGAAGCTGGATCGGAGTCTGAAGAAGAAGTATCTGAGGTCCAGGAGGATAGAAGGCAGCCCAGCTCTGAGCCTAGACCTAAGAGAACTGTCAAGCCAACTATTAGACTTACCTATGATGAGCCTGGTAGATCCAGAGATGAGCGTTTGACCATAGTACACAGAAGGATAGTCATTAAAATAGGAAAACCCTATACACATTAGTTATTATGCCCTTAGGACTCCTTTGTTAGTTTATTAGTGTCTGATGAGGACACACAAACATTTAAAAGGGGGAGGGTGTAACCCTGTTGAAATATATTCTTTAGTATAAGATATGCAAGTTAGAATAAGTAATTTCGTGGTTTAATAAA

Function

NR:

description
Pro-Pol polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000091_00637317_00642235.mRNA True 4049 mRNA 0.47 7 637168 642235

Neighbor

gene id symbol gene type direction distance location
CI01000091_00522844_00581962 POR.L, PORB, POR coding downstream 55206 521951 ~ 581962 (-)
CI01000091_00502517_00506846 NA coding downstream 130322 502517 ~ 506846 (-)
CI01000091_00465845_00496451 MMP28 coding downstream 140568 464996 ~ 496600 (-)
CI01000091_00400737_00412559 NA coding downstream 224609 400440 ~ 412559 (-)
CI01000091_00348777_00349430 NA coding downstream 287439 348467 ~ 349729 (-)
CI01000091_00649152_00693081 DOCK10 coding upstream 6205 648440 ~ 693081 (-)
CI01000091_00712098_00724120 NA coding upstream 69281 711516 ~ 724374 (-)
CI01000091_00774690_00775320 NA coding upstream 131921 774156 ~ 776444 (-)
CI01000091_00797527_00799745 RSRC1 coding upstream 155292 797527 ~ 799745 (-)
CI01000091_00835232_00837630 NA coding upstream 192954 835189 ~ 837725 (-)
G303077 NA non-coding downstream 9727 626991 ~ 627441 (-)
G303019 NA non-coding downstream 246203 369963 ~ 390965 (-)
G303017 NA non-coding downstream 268003 368087 ~ 369165 (-)
G303005 NA non-coding downstream 303236 333688 ~ 333932 (-)
G303002 NA non-coding downstream 307700 329224 ~ 329468 (-)
G303123 NA non-coding upstream 371225 1013460 ~ 1013753 (-)
G303133 NA non-coding upstream 410288 1052523 ~ 1052915 (-)
G303138 NA non-coding upstream 418311 1060546 ~ 1060765 (-)
G303148 NA non-coding upstream 433145 1075380 ~ 1075589 (-)
G303162 NA non-coding upstream 449403 1091638 ~ 1092387 (-)
G303047 NA other downstream 74224 474602 ~ 562944 (-)

Expression


Co-expression Network