G302504


Basic Information

Item Value
gene id G302504
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 42712 ~ 43906 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU343597
TGGAGGTAGAGGTAGAGGTAGAGGTAGAGGAAGAGGAAGAGGAAGACAAGAATGTGCTCAAAGAGGACCGAATCTGACAAATGAGATCCGCGCAACACTGGTTGACCACGTTGTCAACCACGGCCTGACGCTGAGGGAGGCTGGACTGCGAGTACAGCCAAATCTAAGCCGATACACAGTGGCAAGTGTGATAAGAACATTTCGACTGGAAAATAGGATTGAGGGTCAGGAACGACAAGGGGGAAGGCCTCCTATGTTCACAGAACAGCAAGAGAGGGAGATAGTAAACATGGTTTTGGCCAACAATGCTATAACACTCAATCAGCTCCAAGCTAACATTGTCAATAACCACGCCAGTTTCAACGATATCCATCAGGTCTCAACATCAACACTGGCACGCATCCTAAAAAAAAAACATATTCAAATGAAGCAAATTTATCGAGTGCCTTTCGAGCGCAATTCCGAAAGGGTGAAACGACTGCGGCGTGATTATGCAGAGAGAGTTTTATGAATGGATGGAGAGGAGATCCAGCATGAGTTCATTTACGTAGACGAGGCTGGGTTCCACCTGATGAGAACACGAAGGAGGGGAAGAAACATCATTGGCCACAGGGCTATAGTCAATGTCCCAGGCTAACGTGGGGGTAATATAACACTCTGTGCAGCCATTACACAGAATGGGGTCCTCCACCACCATGCCCATATGGGCCCTTACAACAGAGCACTCATACTTACATTCTTGGACCAACTGCACAACATAACAGCAGCAAATCAAATCGAGCATATGCAATACATTGTTGTCTGGGACAATGTGTCTTTCCACCGCTCTGCTCTGGTTCAGAACTGGTTTCAGCAACATCTACATTTCACCTTCCTATATCTTCCACCATACTCTCCATTCCTCAACCCTATAGAAGAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU343597 True 921 lncRNA 0.46 3 42712 43906

Neighbor

gene id symbol gene type direction distance location
CI01000091_00108499_00117102 CDKL1 coding upstream 64314 108220 ~ 119109 (-)
CI01000091_00265846_00269683 NA coding upstream 221934 265840 ~ 270360 (-)
CI01000091_00337653_00338300 CLDN3A coding upstream 293741 337647 ~ 338587 (-)
CI01000091_00346274_00346930 NA coding upstream 302111 346017 ~ 347510 (-)
CI01000091_00348777_00349430 NA coding upstream 304561 348467 ~ 349729 (-)
G302902 NA non-coding upstream 78069 121975 ~ 130074 (-)
G302924 NA non-coding upstream 107297 151203 ~ 151551 (-)
G302931 NA non-coding upstream 120297 164203 ~ 164408 (-)
G302934 NA non-coding upstream 122851 166757 ~ 166971 (-)
G302937 NA non-coding upstream 126044 169950 ~ 170450 (-)
G303047 NA other upstream 430696 474602 ~ 562944 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G828838 NA non-coding NC_048573.1 CM023227.2 62573179 ~ 62573993 (+)