G303019


Basic Information

Item Value
gene id G303019
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 369963 ~ 390965 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU344207
TTAGGTGTAGTTCTTCATATGAACTGAGGAGGGCAGCAATACGCCTCTGATGCATATAGTCTGCTGCAAATATCAGAAGAAGAAGGATGTTTACATGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCAGCATGAGATCAAATTGCTCAGGCTGTTTACCAGTTAGTCTCAAAAACACCCAAAAATAATATTAAAGTTTGATGCAACAGTATTTAAGATATCAAGAATCCTTTTGCAGGTGTACATCTGCCATGTCTCAACATTATTCTGACGAAGTTTGAAGCAAATCGGGTAAATGTAGGAGGGCAATTTCAAAGCATTTTGAAAGTGGCACACTTCCTGCTGCCAGTTGGCGACACTACGACTTTGATTCACAATAGTCACATCCATGTGATCAGCCTCCTTCAACGAACATATAGCTGAAGTCTTATAAAAATCAGTCAATGTATGCAGAAGTTATAACACACTTCCTGTTTCCCTTTTTTTGCCATACATTTGTTGCCTCGCCACAGCCAAACCGTTTGAGATATCAAAAGTCCGTCAGCAATTTAGCATCCTCAATGTCTTGGCTTTATGCTGACCGTGTTTGGAAGTAATCGGATGTATCACCATTCGCCAGCAGTATATCAAATTCCAAAACATGCGTTTTTCAAACAACAAATAATAGCCGACTTCCTGTTGGGTGGAGCTTATGACTATGAGTGTGGAAGTTGAAAGAAAAAAAATCCTTTGCCCTTTAAGGGCTTGGGCCCTAATAATAGTGAGAAAAAAAAACATGCCAAAAACAGATCTATGTGCCTTTATCCACTGATCTATAATAGAGAATTTATATCACCTAGATCAGTGCCTTAATCACAGTTCTGCATTATCATATTTAAAGGGGCGTGCTCAGTCAAAGACTGAAAACTAAAAAAATGCTTTTTTTTTTTTTTTTTTAAGATTTACAAATTTCAGTTGTATAGTAAAATTACATCAAACTGAATCAAACTGAATTGAATAATCCTTATGATACATGTTTATATTATTGATAAATAATTTTAAATTAGCCTAGTTTAAAAAATAGATCTTAATAAAACATTTTATATTAAGATTATATTATAATCTTAAAAGAACAATTGGGAAAGGATCATTTAGTTGTGATTCATATTCATAAATTTAAACATATTTTCACTTTTTTTTTTTTTAATTTATGAATGCGAATCACATATACACTGAAATGGTCCATCCCCTTGCTCCATTAAGATTTATAGGCAACAAAATGTTTGATTAAGCTCTATTTTTTTTTACTCATATAAAATTCTTAATTCATAGCTAATATAGCCTATGGCCTAAGGATTATTCAATTCAATTTGATGGAATTTTACTAAACAATTGGAATTCGTAAATCTTAAAAAAAAGGTACATTTTATTTCCAGTGTAGCCTACTAACATCATATCACATTACACAACATTAGAATTAGATATACATTCCATTAAACATTAAATATGAGTAGCCTAAAGACTGTACAAATTAAACAACAATAATGTTTGTATTGCTATACTTTACTTTCCGATACAATCATCAAGTGTTAAATCAAACTGAAGTCGTTAAAATAAGGAAATATTTACAGTCCATAGTCGATTATTCAAAAGTAACAGGTTTGATCATCTTAAAAGAGTCATATCCTCCTGATTTGAGTGCAATGATTGGACAGATTGGAGATTAATCATAATAAAAATGCCTCTACAACAAAAACAATAAGGTCAAAAGAGTAAATTTTGTATTCTGATTATTCCTCCAGCAGTAACTTGAGCAGCGTGCAGATCCTCGTTTATCTCATAACTTGGCGACACCACGGGCTGACAGTCGCCTCTATCAGATGAATGTTGTTATATGCTATATCTATGAATTTAATTATATTATATCTCGTTATAATGGAAAAAAATATTGTTTTAACGAGAAAACATGTTGTTTTAACGACATAACATCTAGACGTAACGAGTGGAAAAAAATAATATGTGGCAGAAACAATAATTTTTGTTTAATTTCTTCGAATGAAGTGGAAACAGACTGAACATACCTGATCATTGTTTATTGTTTTCTTTTACAGCAAAATGTTATTGTTGTTGTTGTTGTTTTGTTTGTTTGTTGTTGTTTTTGTTTTGTTTTACAGCAAAATTGCTCAAACTGTTTTTACAGGAGATCTTTGCCAACATCTCTGTTAAGTTTTTCACCAGTTTAGTCACCATGTCAGAGACAAGCATGACCTGATCTTTTCTTGGACATGAGAATATTCAGTATTGTCAAACTATTATTATGAAATGATGTCAATGCAGTATCAATAAGTTGTTTTACAGAACTATTTATTTTAATAAACAAATAGTAAGACAAATTTAATGATCAAGACATCTTTGTGCAAAAAATGCTAATTTATAATGATAAGAAGGTTAACACACATTTTATAAAATCTGATTAATGAAACTATTCCTATTGTCATATTAAACATAAATTGCAAGAATGGCTTGTTTATAAAAAAAAAAAAACAGATCTCTGCTTCCCTGAGTTTGATTCCTCTCATCACATTATACACATTTTTCTCTTTCAGTGATCTGTATAATCACAGCACAAAACCTCAGTAAATAAACTGTCATATCAGACACTGTCCTTCTACTTCTCCTTAGAAAAAAAATCCGCAGGTGGGAATAAAGAGGTTTTACAGGAAAAAAAGTCTTTGCAAGTAAAAAGTCTTTGTATGCTTGATCTCTTTCAGACGTAGGCTTTGCTGGTGGCAACAGACCGTGGCTGAGAGTACTTGATGCCGTAGTTGTCGTCCTTAGGTGGGCAGGAGCTACACAGTATACCTCCTCCCAGGATCAGCAGTGCAGCTGCACCCCATCCAATATATAGAGAAGCCCCAATCTCCCTTCTTTGAGCATCTGTGAGCAAGGGATTGTAGAAATCCCTGATGATGGTGTTAGCTGACCAACAGACGGGGACCAGAACCAACACTCCAGCAACGATGAAGATTATACCACTAGCGATAGCCACCTTTGCCTTTGTGTCTTCCCTCTCGACAAAGCTGGTACATTTTCCTCCAGCAATTCCCAGGATGATCCCAAAGATGCACACAATGATGGCGATGACCACAAGTGCCCGAGCCGCCTGCAAGTCCTGAGGTAAGGCCAAGAGGGAGTCATAGATTTTGCACTGCATTTGTCCTGTGCTTTGTATCACACAGTTCATCCACAAGCCTTCCCAGATGGTCTGCGCAGTAACGATATTGGCTCCAATGAATGCTGTCACCTTCCACATAGGAAGGGCACAAATCACAATAGCTCCTATGAAACCAATAATGCCTAGGGACATGCCCAGGATCTGTCGACACATAGACACCATTTTTTTCTCGTTTGCTTGGCTTCGTTTGCTTGAAAGTGTTCGCTCTTCTCTTA
>TU344208
AAAAGAATGAACCAATTCATCAACTGAAAGAACTGGGTGGATATCAACCACAAGCCTAGTGATTTAGTGATCTGCAAAATTGCTCAAACTGTTTTTACAGGAGATCTTTGCCAACATCTCTGTTGAGTTTTTCAACAGTTTAGACACCATGTCAGAGGCAAGCATGATCTGTTTAATGTTTTCTTGGACGTGACAATATTAAGTATTGTCAAACTATTATTATGGAATGATGTCAATGCAGTATCAATAAGTTGTTTTACAGCAAAATTGCTCAAACTGTTTTTACAGGAGATCTTTGCCAACATCTCTGTTAAGTTTTTCACCAGTTTAGTCACCATGTCAGAGACAAGCATGACCTGATCTTTTCTTGGACATGAGAATATTCAGTATTGTCAAACTATTATTATGAAATGATGTCAATGCAGTATCAATAAGTTGTTTTACAGAACTATTTATTTTAATAAACAAATAGTAAGACAAATTTAATGATCAAGACATCTTTGTGCAAAAAATGCTAATTTATAATGATAAGAAGGTTAACACACATTTTATAAAATCTGATTAATGAAACTATTCCTATTGTCATATTAAACATAAATTGCAAGAATGGCTTGTTTATAAAAAAAAAAAAACAGATCTCTGCTTCCCTGAGTTTGATTCCTCTCATCACATTATACACATTTTTCTCTTTCAGTGATCTGTATAATCACAGCACAAAACCTCAGTAAATAAACTGTCATATCAGACACTGTCCTTCTACTTCTCCTTAGAAAAAAAATCCGCAGGTGGGAATAAAGAGGTTTTACAGGAAAAAAAGTCTTTGCAAGTAAAAAGTCTTTGTATGCTTGATCTCTTTCAGACGTAGGCTTTGCTGGTGGCAACAGACCGTGGCTGAGAGTACTTGATGCCGTAGTTGTCGTCCTTAGGTGGGCAGGAGCTACACAGTATACCTCCTCCCAGGATCAGCAGTGCAGCTGCACCCCATCCAATATATAGAGAAGCCCCAATCTCCCTTCTTTGAGCATCTGTGAGCAAGGGATTGTAGAAATCCCTGATGATGGTGTTAGCTGACCAACAGACGGGGACCAGAACCAACACTCCAGCAACGATGAAGATTATACCACTAGCGATAGCCACCTTTGCCTTTGTGTCTTCCCTCTCGACAAAGCTGGTACATTTTCCTCCAGCAATTCCCAGGATGATCCCAAAGATGCACACAATGATGGCGATGACCACAAGTGCCCGAGCCGCCTGCAAGTCCTGAGGTAAGGCCAAGAGGGAGTCATAGATTTTGCACTGCATTTGTCCTGTGCTTTGTATCACACAGTTCATCCACAAGCCTTCCCAGATGGTCTGCGCAGTAACGATATTGGCTCCAATGAATGCTGTCACCTTCCACATAGGAAGGGCACAAATCACAATAGCTCCTATGAAACCAATAATGCCTAGGGACATGCCCAGGATCTGTCGACACATAGACACCATTTTTTTCTCGTTTGCTTGGCTTCGTTTGCTTGAAAGTGTTCGCTCTTCTCTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU344207 False 3442 lncRNA 0.35 2 369963 390965
TU344208 True 1538 lncRNA 0.39 3 369963 377540

Neighbor

gene id symbol gene type direction distance location
CI01000091_00348777_00349430 NA coding downstream 20234 348467 ~ 349729 (-)
CI01000091_00346274_00346930 NA coding downstream 22453 346017 ~ 347510 (-)
CI01000091_00337653_00338300 CLDN3A coding downstream 31376 337647 ~ 338587 (-)
CI01000091_00265846_00269683 NA coding downstream 99603 265840 ~ 270360 (-)
CI01000091_00108499_00117102 CDKL1 coding downstream 250854 108220 ~ 119109 (-)
CI01000091_00400737_00412559 NA coding upstream 9475 400440 ~ 412559 (-)
CI01000091_00465845_00496451 MMP28 coding upstream 74031 464996 ~ 496600 (-)
CI01000091_00502517_00506846 NA coding upstream 111552 502517 ~ 506846 (-)
CI01000091_00522844_00581962 POR.L, PORB, POR coding upstream 130986 521951 ~ 581962 (-)
CI01000091_00637317_00642235 NA coding upstream 246203 637168 ~ 642235 (-)
G303017 NA non-coding downstream 798 368087 ~ 369165 (-)
G303005 NA non-coding downstream 36031 333688 ~ 333932 (-)
G303002 NA non-coding downstream 40495 329224 ~ 329468 (-)
G302970 NA non-coding downstream 128670 241060 ~ 241293 (-)
G302946 NA non-coding downstream 180068 189586 ~ 189895 (-)
G303077 NA non-coding upstream 236026 626991 ~ 627441 (-)
G303123 NA non-coding upstream 622495 1013460 ~ 1013753 (-)
G303133 NA non-coding upstream 661558 1052523 ~ 1052915 (-)
G303138 NA non-coding upstream 669581 1060546 ~ 1060765 (-)
G303148 NA non-coding upstream 684415 1075380 ~ 1075589 (-)
G303047 NA other upstream 83637 474602 ~ 562944 (-)

Expression


Co-expression Network