CI01000092_00116452_00128007


Basic Information

Item Value
gene id CI01000092_00116452_00128007
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 115335 ~ 128007 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_00116452_00128007.mRNA
AAGTCATCCAACTGTCCTCATCCTCCTAAGATCAAGATAAAGAGTTCACCCTTCATAGAAAAACTTCAGGCCAATCTTGCTCTCTCTCCAACTGTCCTGCTCTCCCCACCCAAAAGTCCAGAGTCTAAACAGCCACCGACTGCCTCCTGTCCCATCAGTCCCTGCAGCTCCGTGAGCTCCACCCTGCAGCCCATTCAGCTGTCCTGTGAAGATGAGGCGCCGGTTAGCTTTGAGCAGCCGGTCGAGGGCACGCCACTGCCCAACATCAACAAGAGAATCTCTGATGTGTGCAGAACGAGATGTGATGAGATCAGCATGAAGAGTCGAGCTAGGCTGTCTTTCAAGCGACGGCTGCCCACACGGCTACACAGGAAGTCAGCAAGTGACGAGACAAAAATGAATGAAGGATATGACTCTCCATTTCAACCAGATACTCAACAGCAGAATGGGGATGAAGGGGAATTGATTGTTGGGCCTTTTCAGGTGGACACAGAAGATAAAACAGACTCTGCTCAACCCACCAATGACCCAAAGCAGGCAAACGACAGGACAGAGCACAGAGATGTACCCCAAGAAAACGAGAGGACTGAAGTAACCCATACAGAAAAAGTGGAAGAAGTAACTAGGGGAGGATTTGAACCTTCTGATTGTAAACAGGCCCAAGAAGAAGAGAAGGAAGAGGACAGGGCAGAAGTGAAAGACGACAAGGAAGTGCTGGATGCAGAAAACAGCTCAGAATAGACGTGATAGGCTAAAGCTCATCAAAATGGATTATTTTGCAAGATACGCATTGCTTTAGCAAACTAGAAATGTGAGAAGGTTATTCCAGACAACAGCCGAATTAATGGAGTTTCTATCAAACAGACTCCAAGATGGATGAAGACGGACAGTGTCTGAATGCCAGGACTGAATTCTTCTCTTTTAAGATTGTGGATTTGGGAACTTAATATTGCTATAGCACAAAGTTTTAGAAGTTATCATCACAATTTACGTTTTGGTGAGTTGGTGGTGAATTTATATGAATTACAATCTCATTTGTACGTCTTCGTATGACCTGCTTACGCCTCACTGTGAGTTAGGTTTGTGATGGACCTTCATGCTTACTTTTCTCTAAAACTCGTTTTCGTAAAAATCACATTGTATTATTCATACAATTTGCCACCAATTCCACCAAAATGTAAAATAGTTATGTTTTCTCAAGAGGTCGGATTAGATTTTAGTTTTGTAGGGTTATTCATATGCCTCGATTTTCTTGCTTTCTTATTTTTCAAGTAAACTTATGTTGGAAACTTTTTGCTGTTCAGAAAATGAGAGCACTTTCAGCTTTGGAAAGCATTCTCCTTTTTGAAAGCACTTTTTGAGCCTTTACCCTATATGAATATTCATGTTATTCAGTTTATGACTTGTAACAAGACAAATAGCACTGAAATAAGTGTTTTAAAATGTCACTCATGCCTCTGTGACAGGCCTAGGCTCTGTAAATAGCAAAAAATGGGGCTGGCCTGCACTTTTTTGGACAATCGGAAAACTAGCCAAACAGAAACGCTCTTTAGGCGACCTGTCAGTCATTTTGAGTGTTTGGATTTGCTGACATTGGTTTGGCTGTAGGGTGTGTAGTTGAAATTACAAAATCAGAAGTCACTAACTGCACTTTTACTTTCTGATGTTTTCTTTTTGTTAAATCTTGCAAACATGGTAAACAAGCTAAATACAAACAAAATAGTGGCAGCAATATACCAGCAGTCTCTGTTGCTATGCAAAGATACTTTATTAAATGAAAAAGCCTGGGATGTATCACTGTGACTGCAAAGCTACTGTACTGCAATTACCTTTTATTATTCGTATAAGACTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_00116452_00128007.mRNA True 1858 mRNA 0.41 4 115335 128007

Neighbor

gene id symbol gene type direction distance location
CI01000092_00103480_00114306 NA coding downstream 593 102168 ~ 114742 (-)
CI01000092_00015546_00042149 NA coding downstream 73186 15401 ~ 42149 (-)
CI01000092_00156990_00162891 MLNR coding upstream 28983 156990 ~ 162891 (-)
CI01000092_00174874_00180333 FNDC3A coding upstream 46867 174874 ~ 180333 (-)
CI01000092_00237358_00269420 NA coding upstream 108305 236312 ~ 271283 (-)
CI01000092_00271933_00272986 NA coding upstream 143381 271388 ~ 272986 (-)
CI01000092_00335844_00338581 NA coding upstream 207319 335326 ~ 338581 (-)
G304012 NA non-coding downstream 21931 91635 ~ 93404 (-)
G304004 NA non-coding downstream 29070 79513 ~ 86265 (-)
G304025 NA non-coding downstream 92887 22159 ~ 22448 (-)
G304022 NA non-coding downstream 96711 18422 ~ 18624 (-)
G304021 NA non-coding downstream 97919 17188 ~ 17416 (-)
G304050 NA non-coding upstream 138657 266664 ~ 266947 (-)
G304052 NA non-coding upstream 153228 281235 ~ 281438 (-)
G304053 NA non-coding upstream 153512 281519 ~ 282555 (-)
G304057 NA non-coding upstream 209008 337015 ~ 337687 (-)
CI01000092_00409098_00411916 STOML3A, STOM, STOML3B, STOML3 non-coding upstream 278257 406264 ~ 411916 (-)
G304368 NA other upstream 927297 1055304 ~ 1055722 (-)
G304369 NA other upstream 930318 1058325 ~ 1058920 (-)
CI01000092_01086701_01097333 CLRN1 other upstream 958655 1086404 ~ 1097333 (-)
G304459 NA other upstream 1103893 1231900 ~ 1232292 (-)
G305772 NA other upstream 2596587 2724594 ~ 2724944 (-)

Expression


Co-expression Network