CI01000092_00335844_00338581


Basic Information

Item Value
gene id CI01000092_00335844_00338581
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 335326 ~ 338581 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_00335844_00338581.mRNA
GCACGGCGTTCAACAAAGTCTAGGAACTCAGCATTACTGTGATATAGGCAATAATGCTGGCACAACCGCCACTTTGCTCTCATCCACTCATGATGGCGACAGCAACAATCTGCATGTCTGGCTGCTGGCATCAGTTACACTGCCCAACGAATTAAAGACAAAGACACTAGTCTTGAATTCTTCCACTTATGTAGGGCTTCAAATGGGAATGCAGTTTAAAGGCACTGGGACCCAGAAGAAAACCAGTGCAGTGGCTTTCCACTTCTTCACGCTCAAACCACAGGAATTTGGAGTAACTCTCTCCAGATCTGAGGCATATGAGTTAACAGGCCTGGATGTAGCAGAGCCTGAGCAGAATACCTGCCTAGACTCCATCTCTCAGTCAGTTTTTGAAGGCCCCGTAGCGGCTGGCTTTGCTGATAAAGTTCTTCAGCAGATCGTGGTCCATGTCGGCGAAGGCCTGCGTCTGAGTGACGGCCGTCAGGTGGTTAACGCAAAACTTGAAACAGAACTCTTCCAGATCCTGCACATGAAGAGTGGATGGACTGATTCAATGAGAAAGAGAACCACCACCAAAGACCTACAGAATAATATATGAAACCGCAAATATATGTACATGTTTAGGGCTCTGTTCCAAAACCTAGTGAGCTGTCTACCTAGACAGCATTTTTAGACATCCTATGTGTGCTATCTTTAGTTATAGGTATTAGGGAAATTGATACAGCTTAGTGTCGTGATATTTTGCATGGGAATATTGTATTGATCTTTTCAGAATTTCGGCTCGGGATTGTTAGTATTCTGCATAACTTTACCATAGGCTCTGCACTTATAATGTGGGAAATAATCATTTGAAATCTTGCTTTCAGACTGTAATTTTTTAGAGAGAAGCAGTCAAGCAAAAGGAGGATCTACATACTGTAAGTGTTTTTGTGACATTTCTAGTTTGATTTTAGTGCTGTGTCGTTGCTAGGAAAGTTTGTTTACTGTATTCACGTATTCACTGTATTCAGTAGCACTGATTTTAAATCAGTGCTACTGCATCTCTCTCTTTCCCTCTCGGACATGCGCATTGGTCTGCGTATAAAGGAAGTGTGTTCTCAGTGAAGGCTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_00335844_00338581.mRNA True 1116 mRNA 0.43 2 335326 338581

Neighbor

gene id symbol gene type direction distance location
CI01000092_00271933_00272986 NA coding downstream 62340 271388 ~ 272986 (-)
CI01000092_00237358_00269420 NA coding downstream 64043 236312 ~ 271283 (-)
CI01000092_00174874_00180333 FNDC3A coding downstream 154993 174874 ~ 180333 (-)
CI01000092_00156990_00162891 MLNR coding downstream 172435 156990 ~ 162891 (-)
CI01000092_00116452_00128007 NA coding downstream 207319 115335 ~ 128007 (-)
CI01000092_00409098_00411916 STOML3A, STOM, STOML3B, STOML3 coding upstream 70272 406264 ~ 411916 (-)
CI01000092_00418628_00428488 SLC25A15, SLC25A15A coding upstream 79241 417822 ~ 428620 (-)
CI01000092_00506401_00508318 NA coding upstream 167158 505739 ~ 508524 (-)
CI01000092_00508717_00509840 NA coding upstream 170013 508594 ~ 510328 (-)
CI01000092_00579690_00648591 COG6 coding upstream 240609 579190 ~ 648591 (-)
G304053 NA non-coding downstream 52771 281519 ~ 282555 (-)
G304052 NA non-coding downstream 53888 281235 ~ 281438 (-)
G304050 NA non-coding downstream 68379 266664 ~ 266947 (-)
G304012 NA non-coding downstream 241922 91635 ~ 93404 (-)
G304004 NA non-coding downstream 249061 79513 ~ 86265 (-)
G304126 NA non-coding upstream 153598 492179 ~ 492631 (-)
G304146 NA non-coding upstream 174522 513103 ~ 513417 (-)
G304147 NA non-coding upstream 175309 513890 ~ 514356 (-)
G304152 NA non-coding upstream 181255 519836 ~ 520585 (-)
G304368 NA other upstream 716723 1055304 ~ 1055722 (-)
G304369 NA other upstream 719744 1058325 ~ 1058920 (-)
CI01000092_01086701_01097333 CLRN1 other upstream 748081 1086404 ~ 1097333 (-)
G304459 NA other upstream 893319 1231900 ~ 1232292 (-)
G305772 NA other upstream 2386013 2724594 ~ 2724944 (-)

Expression


Co-expression Network