CI01000092_00418628_00428488 (SLC25A15, SLC25A15A)


Basic Information

Item Value
gene id CI01000092_00418628_00428488
gene name SLC25A15, SLC25A15A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 417822 ~ 428620 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_00418628_00428488.mRNA
ACTTTTTTCTATATTGATGTGTATACTATTTCAAAGATGGTAGACGTGTATGTTAATCAGGGCAAATCTGAGTTAAACGTTTTTCTGCACTATTTCTACACAGGAAGTGATGCAATATAGCAGAAGTTAACGATGGTGCCACATCCTGTCACTCAAGCCGTCATTGATCTGTCAGCTGGAGCATGTGGTGGGATTGCGTGTGTGTTTAGCGGGCAGCCCTTTGATACAGCCAAGGTGAAGATGCAGACTTTCCCCGGCTTGTACAGAAGCTTTGTCCACTGCTTCGTGTCCGTCTACAAACAGGTTGGACTGCGAGGCCTCTATCAAGGCACCACACCTGCCCTCATAGCCAACATTGCTGAAAACGCTGTGCTCTTCATGAGCTACGGCTTCTGCCAGAATGTAGTGCGCTTTGTTTCAGGAGTGGCCCGAGGCACAGAACTCAGTGATATGCAGAAGGCCTGTTCAGGCTCTGTCGCCTCTATCTTCTCCTCTCTGGCTTTATGCCCCACTGAACTGGTTAAATGTCGACTGCAGGCCATGCATGAAATGGAGGCGTCCGGCAAGATTGCCAGTGGACAGAAAAGCACGGTGTGGTCCGTTGTGAGAAATGTGCTGCGGACAAACGGTCCTCTGGGTTTCTATCAGGGTCTCACCACCACTATAGTCCGTGAGATACCTGGATACTTCTGTTTCTTTGGAGGATATGAACTCAGCCGCTCCATGTTTGCCCACCACATGGGCAGAGACAAAGAGCACATAGGTGTCGTGCCATTGATGTTCAGCGGTGGTTTCGGCGGAGCCTGCCTCTGGTTGGTTGTGTACCCCATAGACTGTGTGAAGTCTCGCATCCAGGTTATGTCTTTAGCAGGGAAACAGGAAGGCTTCCTCAAGACTCTTATGGGAATTTTACGAAATGAGGGAATGGCGCCTCTGTATTCTGGTTTGACCCCGACTATGATCCGAACTTTTCCTGCCAATGGAGCGCTCTTTTTGGCCTATGAAGTCAGTCGCAAGATAATGATGCAACAGTTTGATCACTGAGTCCATCTCTCAGTCTTGGGAGTTTTTCAGACATTTTTTAATCCCATCTTGTGTTTTCAGTTGCATGGAGAACATGCCTTGTGGACATTTTGTCCACCTAAGTGTTGTTAATTTATGTGCATCTTGAATATTTTATGTGTGAGAAAGAATATTTAAATGAATGAAAAAACTAAATGTGTATGACTCTGAAAATCAATGTTTCAAACGAGGGTTATTATTGTTAACTAAAACTATTGAAACGTGTTAATTGAAATAAAGCTGAAATAAAATAAAATATAAATATTAGTTGGAGAAACTAAACAGACATTAGAAATGTTGCTTTGGTAAAAAAAACTTAAGTTTAAGTTGAAGCACTAAAATTATTAACTGGAAATAAATAAAAACTAAAACTGAAAAATAAATAAATAAATAATTCAAAATGCAAAGGATACACAGAAAATTCTATTGTCCATAAAGTACAGGACACAGCTTACAGTATGTCATAATGGCCAAATGCATATACATATATTGTAATGGTGGCTCAGTGTTTCCACTGAGTTGATCTGTGCCTGTCTCTATGGTGAAGTAGCTCTTGACTGCAAGTTACACTCGGTTCTCCAGAGACCCAAAGCTCTGCTTTTATTGTTTGTCTAGTTTCCTTATAATGAGGTCTTGGTTTATACATCTGAACAACTTTGAAGGTTAAATAGTCGTGTGTGTGACAAATGTGTGAACAAACAATATTGTATTTTCCTGCTACGCTTGTAATGTTTTTGATATAAAATACACCCCTTATGTTGCAGTGCCTCATATGCCATACAAATAAA

Function

symbol description
slc25a15a Predicted to enable L-ornithine transmembrane transporter activity. Predicted to be involved in mitochondrial L-ornithine transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in amino acid metabolic disorder; citrullinemia; and ornithine translocase deficiency. Orthologous to human SLC25A15 (solute carrier family 25 member 15).
slc25a15 Enables L-ornithine transmembrane transporter activity. Predicted to be involved in mitochondrial L-ornithine transmembrane transport. Predicted to be located in mitochondrial inner membrane. Implicated in amino acid metabolic disorder; citrullinemia; and ornithine translocase deficiency.

NR:

description
Mitochondrial ornithine transporter 1

GO:

id name namespace
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K15101 SLC25A2_15, ORNT; solute carrier family 25 (mitochondrial ornithine transporter) member 2/15

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_00418628_00428488.mRNA True 1850 mRNA 0.41 6 417822 428620

Neighbor

gene id symbol gene type direction distance location
CI01000092_00409098_00411916 STOML3A, STOM, STOML3B, STOML3 coding downstream 5906 406264 ~ 411916 (-)
CI01000092_00335844_00338581 NA coding downstream 79241 335326 ~ 338581 (-)
CI01000092_00271933_00272986 NA coding downstream 144836 271388 ~ 272986 (-)
CI01000092_00237358_00269420 NA coding downstream 146539 236312 ~ 271283 (-)
CI01000092_00174874_00180333 FNDC3A coding downstream 237489 174874 ~ 180333 (-)
CI01000092_00506401_00508318 NA coding upstream 77119 505739 ~ 508524 (-)
CI01000092_00508717_00509840 NA coding upstream 79974 508594 ~ 510328 (-)
CI01000092_00579690_00648591 COG6 coding upstream 150570 579190 ~ 648591 (-)
CI01000092_00847979_00851661 LPAR6A, LPAR6 coding upstream 418678 847298 ~ 851661 (-)
CI01000092_01054403_01069241 NA coding upstream 625726 1054346 ~ 1069241 (-)
G304057 NA non-coding downstream 80135 337015 ~ 337687 (-)
G304053 NA non-coding downstream 135267 281519 ~ 282555 (-)
G304052 NA non-coding downstream 136384 281235 ~ 281438 (-)
G304050 NA non-coding downstream 150875 266664 ~ 266947 (-)
G304126 NA non-coding upstream 63559 492179 ~ 492631 (-)
G304146 NA non-coding upstream 84483 513103 ~ 513417 (-)
G304147 NA non-coding upstream 85270 513890 ~ 514356 (-)
G304152 NA non-coding upstream 91216 519836 ~ 520585 (-)
G304154 NA non-coding upstream 93445 522065 ~ 522372 (-)
G304368 NA other upstream 626684 1055304 ~ 1055722 (-)
G304369 NA other upstream 629705 1058325 ~ 1058920 (-)
CI01000092_01086701_01097333 CLRN1 other upstream 658042 1086404 ~ 1097333 (-)
G304459 NA other upstream 803280 1231900 ~ 1232292 (-)
G305772 NA other upstream 2295974 2724594 ~ 2724944 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location