CI01000092_00508717_00509840


Basic Information

Item Value
gene id CI01000092_00508717_00509840
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 508594 ~ 510328 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_00508717_00509840.mRNA
ATCTAGTTTCAAATGAAGGAGCCTCCTGCTTAGGGAACCTCAATTTTGGGGGAGGCAGCTACGACTTCGTTACCACAAGAGAGCTGCCTGCTTATAAGACCCATATCAGGGGGAGGCAGCTACAACCTTGGAACTTCAGCATTTCAAAAATGGGACCCACCTACCAAGGCTTGCCTCTAGGTTATCATATGGAAGCTGCCTGTTTCTTATAGGGAACCAACACAGAGGTGGAAGACAGCTCACCTTACCTCAGAGATCTCGAGTTCTCAAAAGCTGTGACAAAAGCTGTGAAAAAATCTTGCTTAGAGCCCATAATGGGAAAGGTACAACTTGTTCTGCCAGCCTCAAGGGGGGCTTCCTGAAGCTTACGCAATTTTAAGGAAGCCCATGCTTTGGTAACACTCGAGAGATTCCTACTTACTGTGGAAAGATAACGTGCTAGCGAAGAAGCAAGCCCTGTTGCACTGACAAGAGCCTCGTCGGATAAGATGGACAGTGCACTCGGATTAAAACCACCGCCGAGATTGATGCTGGACTCGAGCAATCTGGCAAAGACATGGAAGCCGTGGAAAGAAGAATTTCAGCTGTATCTTGATCTGACTTTGACAGAGGTGCCGGAAGGCATGAAGGTGAAACTTTTCTACTATCTGGTAGGAGAAACAGAGGAAAATTTGACGCTGCAGAAATGTGTCCAGATTTGTAGGGCTACCGAGTTGTCCAGAGAGAACAGCAAAACCATTGAAGGAAAAGCAGTGGAGGAAATTCAAGCTTTGAAACAGGTACCGACACACAAAACACTAAAGGATGACAAACGAAAAGCTGACATTACCTGCAAATTTTGTGGAAAGACACACGAAAGAGATAAACAAAAATGTCCAGCTTATGGGAAAACATGTAGGAAATGTGGAAAAGCCAATCATTTCGCTGCATTGTGCAAGTCCAAACGAGAACGTGGAAAAGTTGTGAATAATGTGACTGAAACTGAGAGTGAACAGTATGAGGATATCTGGAGCATCCCAACTGAGTCTGTGAACAAAGTCACAAAGAGCCTGGACAGGCAGCCCTGTCAACTGTTTGCAGGTATGTTGCTCGGGAAAAATTTAGTCAAATTTCAGTTGGACTGTGGGGCAATGTGTAACATTATCCCCATAAACTTTGTGAATCCAGATGTTCAAATAGAGAAAACGTACCAGGTGCTTGTTATGTACAACAAAAGTACACTGAAACCAGTAGGCAAATGCCATCTGAAACTGAGAAATCCACGTAACAAAAGCTGTACAGACTGGAGTTTATGGTCGTTGATGCACACTCTACAGTACCATTACTAGGAAGCAAAGCAGTCCAGGGGATGAAACTGGTTGAAGTACAATCTGAGAATATCCTGGTGGTGGATAATGTTGTGACAAAGACAAACAGAGACGACACAAGTGAACAATGGACAATGGAAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_00508717_00509840.mRNA True 1451 mRNA 0.44 2 508594 510328

Neighbor

gene id symbol gene type direction distance location
CI01000092_00506401_00508318 NA coding downstream 70 505739 ~ 508524 (-)
CI01000092_00418628_00428488 SLC25A15, SLC25A15A coding downstream 79974 417822 ~ 428620 (-)
CI01000092_00409098_00411916 STOML3A, STOM, STOML3B, STOML3 coding downstream 96678 406264 ~ 411916 (-)
CI01000092_00335844_00338581 NA coding downstream 170013 335326 ~ 338581 (-)
CI01000092_00271933_00272986 NA coding downstream 235608 271388 ~ 272986 (-)
CI01000092_00579690_00648591 COG6 coding upstream 68862 579190 ~ 648591 (-)
CI01000092_00847979_00851661 LPAR6A, LPAR6 coding upstream 336970 847298 ~ 851661 (-)
CI01000092_01054403_01069241 NA coding upstream 544018 1054346 ~ 1069241 (-)
CI01000092_01086701_01097333 CLRN1 coding upstream 576076 1086404 ~ 1097333 (-)
CI01000092_01099061_01100011 GPR171 coding upstream 587856 1098184 ~ 1100021 (-)
G304126 NA non-coding downstream 15963 492179 ~ 492631 (-)
G304057 NA non-coding downstream 170907 337015 ~ 337687 (-)
G304053 NA non-coding downstream 226039 281519 ~ 282555 (-)
G304052 NA non-coding downstream 227156 281235 ~ 281438 (-)
G304146 NA non-coding upstream 2775 513103 ~ 513417 (-)
G304147 NA non-coding upstream 3562 513890 ~ 514356 (-)
G304152 NA non-coding upstream 9508 519836 ~ 520585 (-)
G304154 NA non-coding upstream 11737 522065 ~ 522372 (-)
G304085 NA non-coding upstream 19025 529353 ~ 533252 (-)
G304368 NA other upstream 544976 1055304 ~ 1055722 (-)
G304369 NA other upstream 547997 1058325 ~ 1058920 (-)
G304459 NA other upstream 721572 1231900 ~ 1232292 (-)
G305772 NA other upstream 2214266 2724594 ~ 2724944 (-)

Expression


Co-expression Network