CI01000092_01099061_01100011 (GPR171)


Basic Information

Item Value
gene id CI01000092_01099061_01100011
gene name GPR171
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 1098184 ~ 1100021 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_01099061_01100011.mRNA
AGATCCAAAAATGGGGAGTCCAAATACAAGCATCTGCGTGGTCAACGACAACATGGTGCCCTTCGCCACAATCTACATCCTCATCTTCCTGATTGGAATGGCTACCAGCATGGTGGCACTGTGGGCCTTCATAACCAGCCGAAGTGCTAAAAAGTGCATTAATGTTTACTTCATCAATCTTCTGACGTCCGACTTCCTCCTCATGCTGGCGTTACCCGTCAAGATTGCTAAAGATCTGGGCAATGAATCGAAGAGTTTGACCATCTTTCATTGCCAAGTGAGTTCGCCACTCATCTACATCAACTTGTACGCATCCATTATCTTTCTAGCTTTTGTTAGCGTTCAGCGCTACCTCCAGATCACTCGCAGCTCCAAACTGCTGCGATTGCAGGAAGTGGGATTTGCGATTCTGATGTCATCGGTGGTCTGGTTCCTTGTGCTCTTCATCAATGTGCCCAACATGGCCATCCCCATCAAAGAAAACATTGAAGACAAAGTTGGGCTAACATGTTCTGACTTAAAAGATGATTTGGGCAAGCACTGGCATGCATTGTCTGTATTTCTGGGCATGGCTATCTTCTTCAATGCTTCAGTAGCTGTGCTTTTGTCCAACGGCCTGGTCTTGAAGCAGCTTTGGGGTCGCCGTGAATGTGACCCTGAGGAACAGGCTAGTGCCCGACATGCCTTCATAAACATTGGGTTGGTGACCTTGGCTTACGTGGTGTGCTTCGTGCCGTACCACGCCGTGCGTATGCCTTACACTTTTACGCAGATGGACGTCATCACTGAATGCACGTGGAAGAAGAATCTCTTCCTGGCCAAAGAGTCTACTCTACTTCTTGCCATCCTACACCTGTGCTTTGATCCTGTGCTGTACTTTGTCATCTGCCGTGCATTCAGGCATCAGATCACAAAGGCCTTCTCAAACATACGCACCGTTCCAAATGCAGATCCAGAGTGAAAATTCCATCGGAGGAGAGTTATGGACTTAGTATCAGTGCAAAATCCTTTGTTGAATGTAGGGTGAAGAAAGTTTCTTGATGAACTGCAGATTGGTGATGTAGGAAAAGCAAAAAAGCTGAACAAAGCAGAAGACCGAAGTCTGGGGGAAAGAAGAATGTACAAAGACCTTTGGCCAAAAATGGCAAAAAATGTCAGTTGAAAAAGTCGTTGCAATACAAGTTAATGGAACTCTATAATTTAAACTTAAGTCTTCTAATATAACTACAGAAGATGGACTGTGCAATGATGCTCAAATGTGGATTATACAATGATGTTTGTACTGTATGTTTATGTTTGTGTGTGTGGGGGGGGGGGGGGGGGGGGGGGGTGGTGAAAACAGATCATAAATCATACAGAATGATGTTCTTTGAAAATGTAAAAATGCAGAAAGTTCTAAAAATCATTATGTCTATGGGAATTCCCCATAAAACATGAAAACCCAACGTGTGTGTGTGTGTACACAGGTTTCAGTTACATAGTGAAAGATTATGACAACCAACTAGTGATCACATTTTACTGGTTTTTATTTAAATCTAGTGTTTTGAACATGTTTCTGTGATGGGTCGGTTAAGCCATAGAAAATATCACCTGATATAAATTATTCATTTAATTTTTTATTTTTGGTGGTTTTGTCTTGCAAAGTGGGGAAAAGGGTGGGTAATGGGACTGTGAAAGGGCCAAGAGGGACTTGAACTTGCATCATCCAAAGGGTGACAGCGCTACAGGCTAACAGCTCAATCATGAATTTAATTTAATTAATTAAAAATTTAAATAACTAATTTAATTTTTTTTTTTTAAGTTTTAACTATGTAAGCATTGATCATTCAGTGAATAAA

Function

symbol description
gpr171 Predicted to enable G protein-coupled purinergic nucleotide receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human GPR171 (G protein-coupled receptor 171).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_01099061_01100011.mRNA True 1838 mRNA 0.42 1 1098184 1100021

Neighbor

gene id symbol gene type direction distance location
CI01000092_01086701_01097333 CLRN1 coding downstream 851 1086404 ~ 1097333 (-)
CI01000092_01054403_01069241 NA coding downstream 28943 1054346 ~ 1069241 (-)
CI01000092_00847979_00851661 LPAR6A, LPAR6 coding downstream 246523 847298 ~ 851661 (-)
CI01000092_00579690_00648591 COG6 coding downstream 449593 579190 ~ 648591 (-)
CI01000092_00508717_00509840 NA coding downstream 587856 508594 ~ 510328 (-)
CI01000092_01110360_01113717 NA coding upstream 10258 1110279 ~ 1115228 (-)
CI01000092_01122961_01135673 NA coding upstream 22801 1122822 ~ 1136003 (-)
CI01000092_01186569_01191243 NA coding upstream 86100 1186121 ~ 1191533 (-)
CI01000092_01201434_01205306 NA coding upstream 99853 1199874 ~ 1206532 (-)
CI01000092_01266540_01267541 NA coding upstream 166337 1266358 ~ 1268479 (-)
G304365 NA non-coding downstream 12790 1084513 ~ 1085394 (-)
G304380 NA non-coding downstream 21655 1076298 ~ 1076529 (-)
G304378 NA non-coding downstream 26187 1071410 ~ 1071997 (-)
G304372 NA non-coding downstream 36856 1060641 ~ 1061328 (-)
G304371 NA non-coding downstream 37575 1059859 ~ 1060609 (-)
G304432 NA non-coding upstream 116976 1216997 ~ 1217247 (-)
G304433 NA non-coding upstream 117833 1217854 ~ 1218144 (-)
G304436 NA non-coding upstream 121845 1221866 ~ 1222070 (-)
G304423 NA non-coding upstream 125053 1225074 ~ 1225310 (-)
G304458 NA non-coding upstream 131093 1231114 ~ 1231434 (-)
G304369 NA other downstream 39264 1058325 ~ 1058920 (-)
G304368 NA other downstream 42462 1055304 ~ 1055722 (-)
G304459 NA other upstream 131879 1231900 ~ 1232292 (-)
G305772 NA other upstream 1624573 2724594 ~ 2724944 (-)
G306014 NA other upstream 2577853 3677874 ~ 3679488 (-)
G306679 NA other upstream 3396393 4496414 ~ 4505953 (-)
G306792 NA other upstream 3704374 4804395 ~ 4865973 (-)

Expression


Co-expression Network