CI01000092_01270604_01273133


Basic Information

Item Value
gene id CI01000092_01270604_01273133
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 1269745 ~ 1273133 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_01270604_01273133.mRNA
CTCGATCATGGACCAGAACACAACCAATTTAACTCAAGGATCTTGTGGCTTATCTGAAATGCCAGCTCGTACATTCTTTATATCTGTATACTCACTGATTTTTCTGGCAAGCCTGGTACTAAACAGCCTTACAATATATGTGTATTTTTGTAAAGATACAAATCAGTCCAGCATCACAGTCTATCTCAAGAATCTGGTTATAGCTGACTTGTTTGTCTGCCTGTGTTTGATATTACGCATTGTCAAATATGCAAGCACTTCAGTTGAAATTCTGCGTATCTACTGTATGTTTGCTGCTCCAGCTTCATACCTCAACATGTACTCCAGTATTGTCTTCATGGGCTACATTGCTGCAAACAGGTACATGAGAATTGTACGGCCACTGGAGACTCACGTGTTGCAAACAGTCCGCTCGACCAACTACATCTGCATAGTGACCTGGGCTGGCCTGTTGTGCTTTGTTTGTGTCTACATTGCTGTTTTTGTCAGTTCTGATAAAGAAAACTCTCCCCACAGTGGTTTCAACTGTGAAATCTTTCATAACAGCTTGCTCAAACAGATCTACTTGGTCATGCATATCGCCTCCTTTTTAATGTTTTTGTCTGTGCTAATATCCCTGATTCTGTTTTATTGGGGGAATGTACAGAGGCTTCGACAAGCTCAGCGCACTATGCCGGAACAGCCTGGGAACTCTAAGCTCAGCAAGTCAAAACGTAACATGCGAGTACTGGTGGTGGTTTTCTGCGTGTGTTTTGTGCCCTACCATATGGTGAGACTGCCGTACATGTTCGTCAATCCCCGGCTGCATGACTGTACTTCAGCTCAGGCGTTCTACATCCTAAAGGAGCTGACCGTCCTGCTTGCAGTACTAAATGCCTCATTGGATCCACTTATTTACTTTGTCTTTTGCAAGACTTTCAAGGCCCACCTTCAAAGATTTCGACAAAATAACTAGTAAGTTGAATTAAAGGTGAAATGTGTGATTTCTGCACCACTAGTGGCATGAAACGGAACTGCAAAAATTTAGGCAAGATATGGGTGTGAGGTATGAGCCCTACATGGGATTGTGCATGGGTTTCATGTCAACCCTATCTGAATTAGCCCATACTGTGCCTAATTCATAGACATTCATTCATAGACAACCCATAGACAAACCCATGAAGGGCCCATACCTCACGCCCATATTGTGCCTACATTGGCCCCACCATAAAATGTTGGCTGGGAACAGGTTCACTTGAAATCACTATTTGATTTCATTGCTTTAATGACAGCAGCACTTGAGCTGCATGAACTTCACAAGTTTGTGTAAAACCTAATGATCATGTTCTCCTGCATCATTTGAGAATTTTTTTGCATCTTGAGCTTTAATGGAAGCAAGAACATCTGACCATCTGTACAAAGGAGTTTATCTAGATCAGTTTACTTATTTAATTAGTAACATAGCAGTAGTGCAGAAATATTTCTTATCATTTTAAGACTTTTCTTTATTTTATTTTGCTTGCCAAAAACATCAATATAGAACCTAAAATATGTTGAATATACAAATATAACATGATGTCCACCTTAGGAAAATGGGCATCTCCATGCTTTATTCAAACATTATTAAAAATTTGTTAAAGATTTTGTAAGCATATTGCGTTAGGGTTATATATATGTATATATATATATATATATATATATATATATATATATATATATAAATTTTTTTACCCCCTCATATATTGATGGTTTAATCAAGCATGTAGGGTCATTAAGAACAAATTAAAACAAATTCTGCCACCACTGTAAACACATTATACAATAGTAATAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_01270604_01273133.mRNA True 1814 mRNA 0.38 2 1269745 1273133

Neighbor

gene id symbol gene type direction distance location
CI01000092_01266540_01267541 NA coding downstream 1266 1266358 ~ 1268479 (-)
CI01000092_01201434_01205306 NA coding downstream 63213 1199874 ~ 1206532 (-)
CI01000092_01186569_01191243 NA coding downstream 78212 1186121 ~ 1191533 (-)
CI01000092_01122961_01135673 NA coding downstream 133742 1122822 ~ 1136003 (-)
CI01000092_01110360_01113717 NA coding downstream 154517 1110279 ~ 1115228 (-)
CI01000092_01307631_01315805 NA coding upstream 34182 1307315 ~ 1315805 (-)
CI01000092_01317932_01336911 ANO7 coding upstream 44641 1317774 ~ 1338546 (-)
CI01000092_01352766_01386659 ECE2B, ECE2 coding upstream 79612 1352745 ~ 1386659 (-)
CI01000092_01451469_01485752 ATP1B3B coding upstream 178336 1451469 ~ 1485752 (-)
CI01000092_01488880_01522758 TFDP2 coding upstream 215747 1488880 ~ 1522758 (-)
G304458 NA non-coding downstream 38311 1231114 ~ 1231434 (-)
G304423 NA non-coding downstream 44435 1225074 ~ 1225310 (-)
G304436 NA non-coding downstream 47675 1221866 ~ 1222070 (-)
G304433 NA non-coding downstream 51601 1217854 ~ 1218144 (-)
G304432 NA non-coding downstream 52498 1216997 ~ 1217247 (-)
G304477 NA non-coding upstream 13095 1286228 ~ 1286555 (-)
G304481 NA non-coding upstream 16306 1289439 ~ 1289777 (-)
G304484 NA non-coding upstream 72160 1345293 ~ 1345613 (-)
G304455 NA non-coding upstream 73196 1346329 ~ 1346888 (-)
G304487 NA non-coding upstream 150456 1423589 ~ 1423791 (-)
G304459 NA other downstream 37453 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 172827 1086404 ~ 1097333 (-)
G304369 NA other downstream 210825 1058325 ~ 1058920 (-)
G304368 NA other downstream 214023 1055304 ~ 1055722 (-)
G305772 NA other upstream 1451461 2724594 ~ 2724944 (-)
G306014 NA other upstream 2404741 3677874 ~ 3679488 (-)
G306679 NA other upstream 3223281 4496414 ~ 4505953 (-)
G306792 NA other upstream 3531262 4804395 ~ 4865973 (-)
G306902 NA other upstream 3880535 5153668 ~ 5154133 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008965 CR626884.5 coding NC_007126.7 CM002899.2 4049222 ~ 4053149 (-)