CI01000092_01802304_01802591


Basic Information

Item Value
gene id CI01000092_01802304_01802591
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 1800795 ~ 1804239 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_01802304_01802591.mRNA
ATAGTTTTTTATCTGCAGAGTGTCTTTTTTAAAACGATACTAATATAGGCCTGTATTCCAAAGCATTCATGAATTACAACCATTAAAGGGGTAATGAATTGAGAAGTCAACTTTTCCTTGAGCTTTTGATATATAAGAAGTCATCGTACTATAAGAATATCCTGTAAGTTTCAGAACTGAAAACTTCCTTGTTAGTCCAATAAAAGCTTTTATTGACACCAGGCTCAGTGAACGACTTGTCCCACAATGTGCCTATCATAGGTGAAACCTCGCCTCCACAGAAGAAATCAAGGCCTATTTCATCTTTGCAACATTAGCATGTTGGTGGCACGTTAGTGAGATGACGAGGAGAGAAGAGCGATACAGGACTAAAAATAACATTACCTTTCAATGGATCCTAACGCTAGGAATATGGTTATTTATTTTCAACAATGTGAATGTCTCAGTTAAGCATTATTTATTTGTATTCAGAACATTTCACTGTGGATTCTTTGGTAAATCAATCACATTTCAGCACAGGCTTTGCAAAAAAGACTTTTACGATATGGACTCGACAGTAATGCAACAACATGTAAGTAACTGTGTTAAATCTAATGCCTGATCTGATATGTAATGATTTATGTACAGTCAGATGTTCTTTGTCTGTGTGTCAGTAAATCAAACCATTGACTAAACAGTTAGCTTCACGTTTTTTCTCTTAGTTGGATGAAAATAATTTGTTACTTAAACGGTGATTAAATTAGATATAGAAAGGGATCAAAGAACGCTCTCTTTACAATTCCTGGAGCTGTCAATCAAACAGCGCAAGTTTATCAGTGACTGAGTTCTGGACTCGCACCAAAACTCTAATTTTATTCAACAAATCTCTTAGTTATATCGTGTTTACACTGTTAGTTATGATGAAAGCATTCATTGGTGTGCAGAAGTTGAGTTGCAATGAGGAGATCACTGCTTTCATGAGCTCAACAACATGTCTGTGATCGGCTACAATGTTCATCACTGCAACCTTTCATGCCACTAAATATAATGCCATAGATCTAAATGTAATGCTATAATCAACACTTTTCATGATTAGTTAACCTTGAGAGCTGTAATTGTAAAAACATGCTAAAAGTTTTTGAGAGAGTAATACTTAGCTATTTCATTGGCAAACATGTTAGCCAATCACAGCACTGGGCGTTTACACTGAAGTCTCACAGCAGACACGCCCCTTAAAACAGAGCGTTCAAATAAGAGGGCTAAAATCAGGGTAGGAAAAATGCATTTTATTTTTAAATTAGGACAATTTTTTGATGTAAAAAGCATACTTACATTATAAGTGTACCCCAGGAAACATTATAAAACAATAAAACAATGCAGTTCATCACCGTTTAATTTTCATGTCTATGCTCAAAAAGGGGGGTTAACAGTTAACAAGTGCATTTTCAATGTAATAAACTTTTGCTGTGTTTTAAAGAAGTGCACTTATTTTTGTCATGAATGATCCACTGACAGCAAGTAGTTCAAACCCAAGTGCAGTTTATTGAACAAAACAGATACTGCGGACTTGGGCTGTGAAACAGAGAATGAGACCATGGATCGTGGAACAGAGACAGGCCTGGACTGCAGAGCAGAGGTGAGCCTGGACAATTGAGCAGTGGACGAGACCATGGAGGATCAGGTGGATCTGGACTGTAGAGCAGTGGATGAGACTATGGACCGTAGAGCAGTAGACAAGACCATGAAGGATCAGTTAGACCTGGACTGTAGAGCAGTGGACAAGACCATGGGCTGTAGAGCAGTGGACAAGACCATGGAGGATCAGGTGGACCTGGACTGTGGAGCAGTGAACGAGACAATGGACTGTGGAGCAGTGGACGAGACCATGGACTGTGAAGCAGTGGATGTGACCATGGAGGAGAAGGTGGACACCAGGGGGAGCTGGTGGAGATTGTGATCATCTCAACAGATCAGAAGACCACTGTCTGTGGCTGTGACAGGGATCATGAGCAAGAGATGTTGTGGATGCTGCTGCCTCTGGAGAAGTGTGTGTGGCCCACACAAACAGGATAGCAGTGGCAATTACCAGAAGCACCACAGAGAGTGGAATGACCTCTGGGATCACTGGACTTGGGACCACCGAGCTAAGGAGCTGCGAGACCACTGGACTGGGGAGCGCTAGCTCGTGTGCAATGGCAGGCATGGGACAGGCCTCTGCAGCCGGAAGCATGATGTCCCTAAAAAAAAATTATATTTGTGAGACGGCAGGAAGTTAAGGTGTGAGAAGACTCTGGCCATGTTGGCTCTGTCACAGTGTTCTGCAATTCCCACAGTGGAAAATGAACTGCTCAGCAACAAGGCATACTCAATATATTCTGCTAAATTCCCCACAACATCACTCTCAGGCAGTTAGTTCATGAAATCACTAAGTACATTCCAAAAGATGCCTTTTAATGCAATATCACACAACAAAACCACACCAAACTCCTCAACATACTCCTTTATGGTACGATTACCCTAGCTTAAAGGAGCAACTGCTGGGTTCATGGTTACTGTTGTGTATTCTGTCACAAAGGATCCACTGACTGTGAGATAGTCCGAACTCAAGTGCAGTTTATTGAAAAAAAAAAAAAAAAAACAGATAAGAAACTAACACAACATGATGATGACTAGACCTGACAAGCACAGACTTGAACTTGGTTTGAACACACATGAACTTGACTTAACCACGAGCATGAACATAAGACTCACCAACAGCAAATGAAACACAAACAATACAGGAAAAGGAAACATGGCAAACATGAGGGCTTAAACACATGGACATGGGGAAACACGTGACAAGAGCAACCAATGAACAGATGGAACTAATGAAACAAAAACCACTGTTACCGTGACTCATAAAACAAAGGAACCAATGAAAACAAGACACATGAACAGCAGAAGCACATGACAGGCTCACATGAGGGGACAGGTAATCACATGTTGGGTTTTCATGTTTTATGTGGACTTTCCATAGACATGATTTTTAAGCCCTAAGGAGGATCCTGAAACACAAGACACCAGTGAGTCCAAAGGTCTTAAAAGTGATCATATCTCTTGGTTTAAACAACATAAATTATACATCAATGGCAGTGTTGCAGAGATTACTGGGAAGGGTGCTGGGGCAGCGGAAAGTACTTTTCCCAAGTACTTTTTCCATAATTAAGATACTGGAGATTAATTATAAGGAGGAGCTACCAGAAAGGGAGAAATGATTTTTGAGGGAATTAAATGAAATGATCAATGCGTTGGGAAAGGGAATGGATTATTTGCCGTATTGGAGGTTTGAGACAGAGGGGGATTTGATACACTGGGTGAAGGGAATGGGAGAGGCAATGCTTGAACACTGAGATGAGAGGGGCATCAGGGGAGCCAAAGAACAGTTAGAACTATGATGAACCACTCAAAATTAGTGAATTTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_01802304_01802591.mRNA True 3445 mRNA 0.41 1 1800795 1804239

Neighbor

gene id symbol gene type direction distance location
CI01000092_01588502_01599337 NA coding downstream 201458 1588473 ~ 1599337 (-)
CI01000092_01562366_01575276 RFFL coding downstream 225519 1562048 ~ 1575276 (-)
CI01000092_01488880_01522758 TFDP2 coding downstream 278037 1488880 ~ 1522758 (-)
CI01000092_01451469_01485752 ATP1B3B coding downstream 315043 1451469 ~ 1485752 (-)
CI01000092_01352766_01386659 ECE2B, ECE2 coding downstream 414136 1352745 ~ 1386659 (-)
CI01000092_01866991_01869504 LIPT2 coding upstream 62662 1866901 ~ 1869535 (-)
CI01000092_01908289_01908682 DB2, DEFBL3 coding upstream 103072 1907311 ~ 1908691 (-)
CI01000092_01964262_01964863 NA coding upstream 159840 1964055 ~ 1964863 (-)
CI01000092_01981235_01981861 NA coding upstream 176224 1980463 ~ 1981861 (-)
CI01000092_02026073_02027161 NA coding upstream 221823 2026062 ~ 2027525 (-)
G304564 NA non-coding downstream 78231 1722334 ~ 1722564 (-)
G304560 NA non-coding downstream 82422 1718140 ~ 1718373 (-)
G304544 NA non-coding downstream 104414 1695808 ~ 1696381 (-)
G304524 NA non-coding downstream 171411 1629084 ~ 1629384 (-)
G304520 NA non-coding downstream 189440 1611080 ~ 1611355 (-)
G304741 NA non-coding upstream 53448 1857687 ~ 1857911 (-)
G304742 NA non-coding upstream 54093 1858332 ~ 1858539 (-)
G304744 NA non-coding upstream 57620 1861859 ~ 1862148 (-)
G304746 NA non-coding upstream 59297 1863536 ~ 1863827 (-)
G304459 NA other downstream 568503 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 703877 1086404 ~ 1097333 (-)
G304369 NA other downstream 741875 1058325 ~ 1058920 (-)
G304368 NA other downstream 745073 1055304 ~ 1055722 (-)
G305772 NA other upstream 920355 2724594 ~ 2724944 (-)
G306014 NA other upstream 1873635 3677874 ~ 3679488 (-)
G306679 NA other upstream 2692175 4496414 ~ 4505953 (-)
G306792 NA other upstream 3000156 4804395 ~ 4865973 (-)
G306902 NA other upstream 3349429 5153668 ~ 5154133 (-)

Expression


Co-expression Network