CI01000092_01908289_01908682 (DB2, DEFBL3)


Basic Information

Item Value
gene id CI01000092_01908289_01908682
gene name DB2, DEFBL3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 1907311 ~ 1908691 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_01908289_01908682.mRNA
AGAGACGCTATGAGCTACATCATGGGAACTAACATGAGAGCACTGGGACTGATCATAATAACTCTGCTGCTGCTGACAGCGAGTGAAGCCGATGACACAGACATACAGAGATGGACTTGCGGATATCGAGGGCTGTGCAGGAAGCACTGTTATGCGCAGGAGTACATGATTGGTTATCATGGTTGCCCTCGAAGATACAGGTACTCAAATGTTCTTCAGTGAATGTTACTGTGTAAATTACTTTTTTTTTTTTTGCATGAATTACAAAAAAAAAAAAAAAAAAAATCACTTAGAATGGAAGTCTATGGGGCAACCATTGTACACTTGCACCATAGACTTCCATTGCAATTGCCAACACAATCTTACGGCAATTCGTAACTATTTTACATTTTGACTAACTGGTGGCTAAAAGCCTGTCCACACCAATGACGGTAACTATAATGGTTATGATAAAGATAGTTCTAAAAATCATTCTAAATGTAAAAGAATAGCAGAGTCTACACCACAACTATAGTAGTCAACATTTGAAGTGGATCAAAAAAGTTAATCAAAGTTGTCCTAAGAACTAAGTTGTCTGAAGAAGAAGGTTTTAGGACAACTTTGAAGAAAGGTTTTGATCCACTTCAAATGTTGACTACTGTATAACGATAACGGCACGGAAAAACAATAATCGTTGGAATAATTTTCAGAATGATTTTTTCCAGCTGAAGATCGATAAACAGAACATTATCGTTCGTTGGTGTGGATGCTAATATAGTTATCGTTCTTTGTGTGAACGGGCCTTAAATCGTATGAAGCCATACAATATCATTCATACATTTTTTCTTACGACCTGCTGGGTAGGGGTGGGTTGGAATAGGGGCGATTATAGGTCGCGCCTAAAACGCGTGGAAAGTGGCGGAAAATACACGACTGCGTCGCTTCTATTATGCGCGCTTTCTGCGCATCTACATTTGAAATAACAAACTTGAGCTCGAAAATGACGTGACATGTGAACGGCCCCTTAGGGGACCTTCATGCTTACTTTTTTCTAATAATCATACAAATTAATATGAAACCACCACCTAGTAAAATAGCTATGTTTTCCGGTGAGATCAGGTTGGTAAAGTGCATATCTGTCAATGCATTTTTTTTTTTTATTATTTGGTGATGCATTTAGTTGATCTTAACTAGTAACCTGAAATATTTATGCCTAATAAA

Function

symbol description
defbl3 Predicted to act upstream of or within defense response to bacterium and innate immune response. Predicted to be located in extracellular region. Is expressed in digestive system; gill; integument; muscle cell; and pleuroperitoneal region.

GO:

id name namespace
GO:0006952 defense response biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_01908289_01908682.mRNA True 1200 mRNA 0.38 2 1907311 1908691

Neighbor

gene id symbol gene type direction distance location
CI01000092_01866991_01869504 LIPT2 coding downstream 37807 1866901 ~ 1869535 (-)
CI01000092_01802304_01802591 NA coding downstream 103072 1800795 ~ 1804239 (-)
CI01000092_01588502_01599337 NA coding downstream 307974 1588473 ~ 1599337 (-)
CI01000092_01562366_01575276 RFFL coding downstream 332035 1562048 ~ 1575276 (-)
CI01000092_01488880_01522758 TFDP2 coding downstream 384553 1488880 ~ 1522758 (-)
CI01000092_01964262_01964863 NA coding upstream 55388 1964055 ~ 1964863 (-)
CI01000092_01981235_01981861 NA coding upstream 71772 1980463 ~ 1981861 (-)
CI01000092_02026073_02027161 NA coding upstream 117371 2026062 ~ 2027525 (-)
CI01000092_02039063_02039980 NA coding upstream 130149 2038840 ~ 2040333 (-)
CI01000092_02043716_02044633 OR128-10 coding upstream 134700 2043391 ~ 2044672 (-)
G304752 NA non-coding downstream 7833 1899180 ~ 1899478 (-)
G304751 NA non-coding downstream 9274 1897816 ~ 1898037 (-)
G304750 NA non-coding downstream 10333 1896742 ~ 1896978 (-)
G304723 NA non-coding downstream 11324 1894726 ~ 1895987 (-)
G304727 NA non-coding downstream 17273 1884622 ~ 1890038 (-)
G304753 NA non-coding upstream 3286 1911977 ~ 1915467 (-)
G304768 NA non-coding upstream 56540 1965231 ~ 1965483 (-)
G304769 NA non-coding upstream 64091 1972782 ~ 1977219 (-)
G304777 NA non-coding upstream 96055 2004746 ~ 2005197 (-)
G304459 NA other downstream 675019 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 810393 1086404 ~ 1097333 (-)
G304369 NA other downstream 848391 1058325 ~ 1058920 (-)
G304368 NA other downstream 851589 1055304 ~ 1055722 (-)
G305772 NA other upstream 815903 2724594 ~ 2724944 (-)
G306014 NA other upstream 1769183 3677874 ~ 3679488 (-)
G306679 NA other upstream 2587723 4496414 ~ 4505953 (-)
G306792 NA other upstream 2895704 4804395 ~ 4865973 (-)
G306902 NA other upstream 3244977 5153668 ~ 5154133 (-)

Expression


Co-expression Network