CI01000092_02072036_02082309 (OR128-10)


Basic Information

Item Value
gene id CI01000092_02072036_02082309
gene name OR128-10
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2071728 ~ 2083780 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_02072036_02082309.mRNA
AGAGGCTAAAATCCCCTTAACCACAGTAAAATCTCTGTACTTCACATATTTGTATGAAGATAAATAATTACCTTTATAATAATAACAATAAACCATTCTTCTGCCAATAGTTTGTAATTTGGTACATTGATACTAAACTAAATTTGTGTGCAAAAACATTTTATCTGTTTTACAATTTCTTTGACCACTCACTCAAGATCCAATATTTTAGAGCCAGAAATATTGTTTTATAATCTATTGTTTGTGATTGTCTGGTAAAGTTGTATTACTAGACAACTTTGTTGTCAACTTTGTTGCTAACTTCTCTAAACTCTCTAAAAAAGAAAAAAGAAAAAAAGAATACACACTCTGGTGTTAAACGTTACATTTAATGAAATATTCCAAATCCTTATTAATCAGTTACTTTTAACACATTCACTTTTTTCATTTTATTATTAGTAGTAAAATGACCAATAAGTAAAATATGTTGATGTATACAGTAGCTGTATGTAATAAACTTTGTTGGCCTACAATAAGTACGGGACTATGTAGGCACTGGCTACATCATATGTAATCCAGTAATCAAAATCTATGAGCAGCTTTTATATTCTTGGTATTTATGTACATGGATATTGTCAAAGGCAACTGACTTGATAAATGTTAATCTTTTTGTATGGACAACTTTTACCCTACAACCTATTGACTGAATCCAGTAAATCAAAGTCTCAAATCTACAACCCAGGAAATAAATACCAGGTAACACTTTATTTTGATGGTCCACTTTAGACATTTGATGAACTATAAGTAACTTTGCTGTCAGGGTTCTTGCATTTCGGTCTAGTTTATTTCTTGGTTTTGTGACAGAGCCCTGACTCTCCTGTATTGTCTTGTCTTTGTGTGAGCGTATACAGTCTCGAGTGTGCTCGAGCCATGCACTCTCTTGTCTGCGTGTCTTGTTTCATGTTTGGAACGTGGTGCTTTTGACTTTTCCTCATAGTTGTGTGTTCATGTCTCATTTTGTGACGACATGGCTTGTGATTGTTTTCACTGGCCATGCGCTTGTGTTTTTTTTGTCATGTTTGATGTGAGCACATGGCTTGTCATGTGTTTCCCTGTGCCATGTGCTCTCCTGTCAATTGTCTAAACCCACCCATCTTGTTACCTGATTATTGGTTCAGTTGCTTCACCTGTTTGGTTTAGTTGCTTCACCTCATTACCTGCCTTGTTTGCTCCCAACTTATTCTCCTTGTGTTTGCAGTCCTGTGCTGGATCGTCATCATATATTTCCCTTCTGTGTGGTCAAGTCAAGTCAAGTCAAGTCAAGTCCCAAGACCTTGAGCTCCCTCCGTCAAGAGGGGACTGACCTAAGGGAGTTTGCCTTGGAGTTCAACGGTGTTGCAGAAGGTCTGGGGCTAAATTATACAGCTCTCAAAGACTTATTTGTTTATTAGTTTATTTATTAGCCCTTGATGAGCCCTTGAACTGATGGAGAATGAGAGGGCTAGATCACCTGAGATTTGGGGAATTTGTGGATTTCCTTGATTGGCATGGGAATCCTCCTGCTGCAGCACCCCCAGAGGTGGCGGTTGATGATGCACCTTCCCCAGAGGTGTTCGTTGATGCTTCAGAACCCCCGGTGGTGGTTGAAGAAGCTGCAGTGCCACCAGTGGTGGCTAAAGAAGCTGCAGCACCCCCAGAAGAGTCTGTTTATGTTGCAGCTTTCCCTGAGACAGCCGTGAATGCTGCTGTTCCCCTAGAAGTAGCTCTCTCCACGCCATCGCCCCGTCAAAGTAGGCAAAGAAATGGAAGGAACGCTTCCTCTATAGCGTCAAGCCTGTCAGTTCCTGAATTCCCTGTCATGTCCGAAAAGGCTGCCCAGGAGCCCGCTACCTGCCCAGAGACTACTCCTGAGTCACCCGTTTCCCCTGTCAGTCCTGCCTTGGCCCAGAGGGCGATCCTCGCCTTTTATGTCATGATTGTCCTGTGTGCCTGGGCAGCACACACCTCTCAGCTGGCTGTCTCTTGTGCTGTCTGTACTCCTGAGACCTTCCAAGAGCCCGCTGCCTGCCCAGAGACCTTCCCAAAGCCCGCTGCCTGCCCAGAGGCTGTTCCTGAGGCTGCCGCCTGCCTGGAGACCATCCCAGAGCCCGTTACCGACCCAGAGGCCATCCCAAAACCTGCTGCTTGCACGGAGGCTTTCCCTGAGCCTGCTCTTAAGCCCTGGAACTGTTCCACCATGACCCTTGTTCCCTACCTGAAGGCTGGCGAGACCCATGCCCACCACACTGGCAGCCAAACTCCCATTGGGACTGTCACCTTCATTTTGTTCCAATTTTTCACACTTATTCCTGTCCTCCTGGGTCTGATCTGCTTGTTCGGATGGACATTACACCAGCCCATGTACATTCTGATTTCATGTTTGTCCTTCAACTCTGTGTTTGGAACAGCTGCTTTTTTCCCAAGGTTACTGGCAGACTTGCTGTCTGATACACACTTGATGTCCCGTGAAGCATGTCTCTTACAGGCTTTTGTCATTTATTCATATGCATCAAATGAAAATACAATATTAATGTTAATGGCATTTGACAGATATGTAGCAATCTGTAAACCTTTACAATACAACAGCATAATTACTCCCAGGATTTTATCTGTTTTAATAGCTATAAGCTGGATTTATCCAATGCTTTGTGTTGGCATTACTGGTATTTTAAATGCCAGACTGACTATGTGTGGTAACAAACTTTGGAAGGTGTATTGTCACAACTGGGAAATTGTCAAGCTTTCTTGTTCAAACACTATTATTATTAATGTTTTTGGCTTTTTCATAGTGGCCACAACTCTTATCATGCCTTTAAGTTTTATATTATATTCCTATGTTAAAATTCTGATCATTTGTACACAAAGCTCACCAGAGTTCAGGATAAAAGCATTTCAAACTTGTATTCCACACATGGTGATCCTTTTAAATTTCTCTATTGCTATTTTTTGTGAGGTCACTTTGAGTCGGTTTGTGACTTCGGATCTCCCTATAGGGCTCTCGATTATTCTTTCACTGGAGTTTCTTGTTGTACCACCCATCCTGAACCCTATTGTTTATGGTCTGAATTTTCCTGAAATTCGTAAAAAAATTATATGTATTATAAAAGCATCCAAATAGCTGTGTTTTTGATGTAATAGATAATACAGAATGTTTATGATATTCAGCAAAAAATCATTGTTTAATCATTGTTTTATTTCTTACTATGCTTTGTAATCATATACATTATATGTTATCTGCAAATTTAACATTCCCAGTAAATATCTGACACAATTGTATATTTATAGGCCTATACATATAATTTATTATTTAGCCTGGCTAAATGAGCGAACACTGTTACTTCATTCCTGACAGGGGTCAGACAGACCCTAAGTCACCTCTCAGATACCAAATACAGACATTGCTTGTAACATTAATAACTGAATAAA

Function

NR:

description
odorant receptor, partial

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_02072036_02082309.mRNA True 3444 mRNA 0.41 3 2071728 2083780

Neighbor

gene id symbol gene type direction distance location
CI01000092_02055330_02056247 OR128-10 coding downstream 15442 2055017 ~ 2056286 (-)
CI01000092_02043716_02044633 OR128-10 coding downstream 27056 2043391 ~ 2044672 (-)
CI01000092_02039063_02039980 NA coding downstream 31395 2038840 ~ 2040333 (-)
CI01000092_02026073_02027161 NA coding downstream 44203 2026062 ~ 2027525 (-)
CI01000092_01981235_01981861 NA coding downstream 89867 1980463 ~ 1981861 (-)
CI01000092_02134927_02166170 NA coding upstream 50038 2133818 ~ 2166547 (-)
CI01000092_02191463_02196322 NA coding upstream 107376 2191156 ~ 2196570 (-)
CI01000092_02408861_02410832 NA coding upstream 324801 2408581 ~ 2411486 (-)
CI01000092_02423345_02438711 NA coding upstream 339209 2422989 ~ 2438720 (-)
CI01000092_02463561_02465847 NA coding upstream 379343 2463123 ~ 2466249 (-)
G304795 NA non-coding downstream 22396 2049125 ~ 2049332 (-)
G304777 NA non-coding downstream 66531 2004746 ~ 2005197 (-)
G304769 NA non-coding downstream 94509 1972782 ~ 1977219 (-)
G304768 NA non-coding downstream 106245 1965231 ~ 1965483 (-)
CI01000092_01964262_01964863 NA non-coding downstream 107084 1964055 ~ 1964863 (-)
G304853 NA non-coding upstream 41610 2125390 ~ 2161014 (-)
G304895 NA non-coding upstream 148739 2232519 ~ 2232949 (-)
G304898 NA non-coding upstream 154957 2238737 ~ 2239195 (-)
G304900 NA non-coding upstream 156625 2240405 ~ 2241173 (-)
G304902 NA non-coding upstream 160651 2244431 ~ 2244630 (-)
G304459 NA other downstream 839436 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 974810 1086404 ~ 1097333 (-)
G304369 NA other downstream 1012808 1058325 ~ 1058920 (-)
G304368 NA other downstream 1016006 1055304 ~ 1055722 (-)
G305772 NA other upstream 640814 2724594 ~ 2724944 (-)
G306014 NA other upstream 1594094 3677874 ~ 3679488 (-)
G306679 NA other upstream 2412634 4496414 ~ 4505953 (-)
G306792 NA other upstream 2720615 4804395 ~ 4865973 (-)
G306902 NA other upstream 3069888 5153668 ~ 5154133 (-)

Expression


Co-expression Network