CI01000092_02134927_02166170


Basic Information

Item Value
gene id CI01000092_02134927_02166170
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2133818 ~ 2166547 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_02134927_02166170.mRNA
ACAGTTCTCTAGCACATTAAAGAGGAAGCATTGGTGGTCGTTTCAAGTGTATTAGAGAAGGTATTTAAATTGTGCAATGTCTTTTTAGGATACTGGTTGTATTTTTGCCTGATATTGATTGAAAAATTAATTTTAAAGTTGTTGACACTTTGCGTGCACACTGTTAAACTGATAATATATCACACAGTAACTGTGAAGAAGGTAAGGTATCATGAACTAATAAATTGAACCTTACTAAATCCGACCTGTATATATGTAGAATAGACAAAAACAAAAGTTGATAACATATTGCTCATGTTTAAAATGTGCATAAATCATAAGATCTATGTCTGTTGTCTTAACTCAGGTCATTGAAGGCTATCTTTGCTTATCAGAAAATGGAAAATGGAACATATTTTTACTTCATGTTATTTGAAAATCTTGGGTACATAAGATATGCTTTCTTCAGTTTAGGATTTATTCTATACTGTGCTATCACACTATTTAATGCCATTATTGTGCTTGCAATATTTCTGGAAAGGACTTTACACCAGCCCATGTACATTCTGATTTCATGTTTGTCTGTCAACTCTGTGTTTGGAACAGCTGGCTTTTTCCCAAGAGTACTGACAGACTTGCTTTCTGATACACACTCAATCTCTCGTGAAGCATGTGTCTTACAGTCTTATGTCATTTTCACGTATGCAGCAAATGAAAATACAATATTAATGTTAATGGCATTTGACAGATTTGTTGCGATAAGTAAACCTTTGCAGTATTACAACATAATTACACCAAGATATCTAACTGTTTTAATATTTATAAACTTAACTTATCCAATGATTTCTCTTGGTACTTCTGCTATTTTGACTTCCAGACTGACATTGTGTGGTAACAAATTGTTTAAGGTGTACTGCCACAACTTTGAAATGGTTAAACTGTCTTGTGCAAACACTGCTGTTAATAATGTCATGGGCTTTTTTATATTGATCACAACTGTAATCATCCCATTAAGTTTTATATTATATTCTTATGTAAAAATTCTTATCATTTGTCGAAGAAGCTCAGCACAGTTCAAGAGCAAAGCGTATCAAACTTGTATTCCACACATTGTGATCCTTTTGAATTTTTCAATTGCCATTATTTCTGAGGTCACTTTGAGTCGGGTTGTGACTTTACAACTTCCTATATGGCTGTCAGTTTTACTTTCACTTCAATTTCTTGTTATACCACCCATCCTGAACCCTCTTGTTTATGCTGTAAACTTGCCCAATATTCGTAAAACAATTATCTGTCTTATAAATGGATCCAGGTCATTGAAGGCTATCTTTGCTTATCAGAAAATGGAAAATGGAACATATTTTTACTTCATGTTATTTGAAAATCTTGGGTACATAAGATATGCTTTCTTCAGTTTAGGATTTATTCTATACTGTGCTATCACACTATTTAATGCCATTATTGTGCTTGCAATATTTCTGGAAAGGACTTTACACCAGCCCATGTACATTCTGATTTCATGTTTGTCTGTCAACTCTGTGTTTGGAACAGCTGGCTTTTTCCCAAGAGTACTGACAGACTTGCTTTCTGATACACACTCAATCTCTCGTGAAGCATGTGTCTTACAGTCTTATGTCATTTTCACGTATGCAGCAAATGAAAATACAATATTAATGTTAATGGCATTTGACAGATTTGTTGCGATAAGTAAACCTTTGCAGTATTACAACATAATTACACCAAGATATCTAACTGTTTTAATATTTATAAACTTAACTTATCCAATGATTTCTCTTGGTACTTCTGCTATTTTGACTTCCAGACTGACATTGTGTGGTAACAAATTGTTTAAGGTGTACTGCCACAACTTTGAAATGGTTAAACTGTCTTGTGCAAACACTGCTGTTAATAATGTCTTGGGCTTTTTTATATTGATCACAACTGTAATCATCCCATTAAGTTTTATATTATATTCTTATGTAAAAATTCTTATCATTTGTCGAAGAAGCTCAGCACAGTTCAAGAGCAAAGCGTATCAAACTTGTATTCCACACATTGTGATCCTTTTGAATTTTTCAATTGCCATTATTTCTGAGGTCACTTTGAGTCGGGTTGTGACTTTACAACTTCCTATATGGCTGTCAGTTTTACTTTCACTTCAATTTCTTGTTATACCACCCATCCTGAACCCTCTTGTTTATGCTGTAAACTTGCCCAATATTCGTAAAACAATTATCTGTCTTATAAATGGATCCAGGTAAATGATTTATCTAGTATAATAAATAGGGTACATGAATAATCAATACCTGAATTAATACTTAATTCAACATGAACTAATGATTATTGAAGGCATGAACTAATCATGGACTGATGAAGAGCTATCCTTAACTACAGTTGGAGTCGTTATGGATTCATGCATGAATAACAGCAGCCTTAATTACATGTTAGTACGTTTGATAGTTCATGCATTAATTACAATTTATGACTAAACCAAATCAATCAGTCTCTTTAAGAAGGAATAAGAAGTACTCTGACTTTGAAACAAATTTAAATAATTTAATATTATCATAGTTTGAACTTTTGACTGCAGTTTTGTCATAAACATTACTGGATGGCACAGGATTAGTTGATCCTCCTCATCAAATGTAGAGAATACTAAATAAAATAATAACTGACCTTAAAAGGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATAAACATTACTGGATGGCACAGGATTAGTTGATCCTCCTCATCAAATGTAGAGAATACTAAATAAAATAATAACTGACCTTAAAAGGTATTTATCTGTTTTGTGGTGTTCTATTTCCCTTCAAACTCACCCTACTACTACTAAATAAGGAATAAAAATTCAAACCCCACAAAGAACATTTGTGGAACAGTTTCCAAAGAAACGGCCAAACTGGAATCATGGTCAGAGAGTTTGCTGGGTATCAGTAGAGTTCACTCTCCATCCAGACGCAGGCCGTGATGATACTGTACCTCCATTCTCTGACTTCTTGAAAAGCCACACAACATCTTTTAACTGGCCTGAATACTAATTGTGTTAGTACATGTGTATTTGACAGCAAGTTTATGATAAATCAGATGTATTTGTCAAGTATTTAAAAGTGAATTAATTATGATTGGGCCCCTTTAAGAAAAGTCATGACAAAATAATGCATTAACAAGGCATGAGCTGATGTTAGTGTATGGGTAGCTAATCATGAGTTAGTAATGATGTGCCCCTCAAAGTCATGACACGATGATGCACTAACAAATCATTAAATAAA

Function

NR:

description
odorant receptor, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_02134927_02166170.mRNA True 3349 mRNA 0.32 2 2133818 2166547

Neighbor

gene id symbol gene type direction distance location
CI01000092_02072036_02082309 OR128-10 coding downstream 50038 2071728 ~ 2083780 (-)
CI01000092_02055330_02056247 OR128-10 coding downstream 77532 2055017 ~ 2056286 (-)
CI01000092_02043716_02044633 OR128-10 coding downstream 89146 2043391 ~ 2044672 (-)
CI01000092_02039063_02039980 NA coding downstream 93485 2038840 ~ 2040333 (-)
CI01000092_02026073_02027161 NA coding downstream 106293 2026062 ~ 2027525 (-)
CI01000092_02191463_02196322 NA coding upstream 24609 2191156 ~ 2196570 (-)
CI01000092_02408861_02410832 NA coding upstream 242034 2408581 ~ 2411486 (-)
CI01000092_02423345_02438711 NA coding upstream 256442 2422989 ~ 2438720 (-)
CI01000092_02463561_02465847 NA coding upstream 296576 2463123 ~ 2466249 (-)
CI01000092_02522204_02531634 ARRB1 coding upstream 355576 2522123 ~ 2531634 (-)
G304795 NA non-coding downstream 84486 2049125 ~ 2049332 (-)
G304777 NA non-coding downstream 128621 2004746 ~ 2005197 (-)
G304769 NA non-coding downstream 156599 1972782 ~ 1977219 (-)
G304768 NA non-coding downstream 168335 1965231 ~ 1965483 (-)
CI01000092_01964262_01964863 NA non-coding downstream 169174 1964055 ~ 1964863 (-)
G304895 NA non-coding upstream 65972 2232519 ~ 2232949 (-)
G304898 NA non-coding upstream 72190 2238737 ~ 2239195 (-)
G304900 NA non-coding upstream 73858 2240405 ~ 2241173 (-)
G304902 NA non-coding upstream 77884 2244431 ~ 2244630 (-)
G304908 NA non-coding upstream 92838 2259385 ~ 2259718 (-)
G304459 NA other downstream 901526 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 1036900 1086404 ~ 1097333 (-)
G304369 NA other downstream 1074898 1058325 ~ 1058920 (-)
G304368 NA other downstream 1078096 1055304 ~ 1055722 (-)
G305772 NA other upstream 558047 2724594 ~ 2724944 (-)
G306014 NA other upstream 1511327 3677874 ~ 3679488 (-)
G306679 NA other upstream 2329867 4496414 ~ 4505953 (-)
G306792 NA other upstream 2637848 4804395 ~ 4865973 (-)
G306902 NA other upstream 2987121 5153668 ~ 5154133 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location