CI01000092_02522204_02531634 (ARRB1)


Basic Information

Item Value
gene id CI01000092_02522204_02531634
gene name ARRB1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2522123 ~ 2531634 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_02522204_02531634.mRNA
GGTGTTCAAGAAGGCAAGTCCGAATGGAAAGCTAACGGTGTACCTTGGTAAGAGGGATTTCGTTGACCATGTGGACCTTGTGGAGCCTGTCGATGGTGTGGTTTTAATTGATCCAGAGTACTTGAAAGAAAGAAAAGTTTTTGTGACACTGACGTGTGCTTTCCGCTATGGACGGGAGGACTTGGATGTTCTTGGCTTGACATTTCGCAAAGACCTCTTTGTGGCCAACATCCAGGCATTTCCTCCTGTGCCTGAAGAGAAAAAGAGCTTGACACGTCTACAAGAGCGATTGATAAAGAAACTTGGAGAACATGCTTACCCCTTCACCTTCGAGATTCCTCCGAACTTACCCTGTTCTGTAACGTTACAACCAGGGCCAGAAGATACAGGAAAGGCCTGCGGGGTTGACTTTGAAGTCAAAGCTTTCTGTGCAGAAAATGTTGAAGAAAAAATCCACAAAAGAAATTCAGTGCGTCTTGTTATCAGAAAAGTGCAGTATGCTCCAGAGAAGCCGGGCCCACAGCCAATGGCTGAAACCACAAGGCAGTTTCTCATGTCAGACAAACCATTACACCTGGAGGCCTCACTTGACAAAGAGATTTACTATCATGGTGAACCAATCAGTGTCAACGTCCATGTCACAAACAACACAAACAAGACAGTAAAAAAAATAAAGATTTCAGTGCGTCAATATGCTGATATTTGCCTCTTCAACACTGCCCAGTACAAGTGTCCAGTGGCAACAGAGGAATCAGATGATATAGTGGCTCCCAGTGCCACATTTTGTAAAGTATACACTCTTACCCCATTCCTCGCAAATAACCGAGAGAAACGCGGTTTGGCTCTGGATGGCAAACTCAAACATGAAGACACAAATTTAGCATCAAGTACATTGTTAAGAGAGGGAGCCAATAAGGAAATTCTGGGCATCATTGTTTCCTATAAGGTGAAAGTGAAGCTGGTGGTGTCCCGTGGAGGGATTTTTATTTTAACCCTAGAGTGCATGACCATTAACCTGCACAAATGCATTAAGGGGGCCAAAATCACTTATATTGGTTCAGTGGTTTTCTTTCTAAAGGAAAGATATTTCTTTTCAGTTTAATGAAAGATTTTTATTGTACACAAATGTTTGTGTATGTTTTGACAATGTTCAATGCTCCTTCTCATGTACATATACAATAAA

Function

symbol description
arrb1 Predicted to enable G protein-coupled receptor binding activity. Acts upstream of or within several processes, including endothelial to hematopoietic transition; regulation of microglial cell activation; and regulation of signal transduction. Predicted to be active in several cellular components, including cytoplasmic vesicle; cytosol; and nucleus. Is expressed in neural rod. Orthologous to human ARRB1 (arrestin beta 1).

GO:

id name namespace
GO:0035774 positive regulation of insulin secretion involved in cellular response to glucose stimulus biological_process

KEGG:

id description
K04439 ARRB; beta-arrestin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_02522204_02531634.mRNA True 1183 mRNA 0.42 12 2522123 2531634

Neighbor

gene id symbol gene type direction distance location
CI01000092_02463561_02465847 NA coding downstream 55874 2463123 ~ 2466249 (-)
CI01000092_02423345_02438711 NA coding downstream 83403 2422989 ~ 2438720 (-)
CI01000092_02408861_02410832 NA coding downstream 110637 2408581 ~ 2411486 (-)
CI01000092_02191463_02196322 NA coding downstream 325553 2191156 ~ 2196570 (-)
CI01000092_02134927_02166170 NA coding downstream 355576 2133818 ~ 2166547 (-)
CI01000092_02570666_02599836 NA coding upstream 38562 2570196 ~ 2599836 (-)
CI01000092_02602158_02608405 NA coding upstream 70052 2601686 ~ 2608405 (-)
CI01000092_02616905_02658519 WDR62 coding upstream 85184 2616818 ~ 2658874 (-)
CI01000092_02673622_02702051 URB1 coding upstream 141890 2673524 ~ 2702051 (-)
CI01000092_02750776_02767145 NA coding upstream 219106 2750740 ~ 2770053 (-)
G305737 NA non-coding downstream 32511 2489255 ~ 2489612 (-)
G305736 NA non-coding downstream 41958 2479939 ~ 2480165 (-)
G305069 NA non-coding downstream 43579 2478344 ~ 2478544 (-)
G305068 NA non-coding downstream 44186 2477644 ~ 2477937 (-)
G305056 NA non-coding downstream 73352 2447937 ~ 2448771 (-)
G305767 NA non-coding upstream 186368 2718002 ~ 2718204 (-)
G305768 NA non-coding upstream 187241 2718875 ~ 2719151 (-)
G305773 NA non-coding upstream 195803 2727437 ~ 2727705 (-)
G305775 NA non-coding upstream 200999 2732633 ~ 2732835 (-)
G305776 NA non-coding upstream 201907 2733541 ~ 2733796 (-)
G304459 NA other downstream 1289831 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 1425205 1086404 ~ 1097333 (-)
G304369 NA other downstream 1463203 1058325 ~ 1058920 (-)
G304368 NA other downstream 1466401 1055304 ~ 1055722 (-)
G305772 NA other upstream 192960 2724594 ~ 2724944 (-)
G306014 NA other upstream 1146240 3677874 ~ 3679488 (-)
G306679 NA other upstream 1964780 4496414 ~ 4505953 (-)
G306792 NA other upstream 2272761 4804395 ~ 4865973 (-)
G306902 NA other upstream 2622034 5153668 ~ 5154133 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008998 arrb1 coding NC_007126.7 CM002899.2 5390734 ~ 5467477 (-)
bowfin (Amia calva) AMCG00016489 arrb1,LOC108440366,LOC108277835 coding CM030122.1 CM030122.1 21861788 ~ 21904114 (+)