CI01000092_02750776_02767145


Basic Information

Item Value
gene id CI01000092_02750776_02767145
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2750740 ~ 2770053 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_02750776_02767145.mRNA
AGCTTTATTGTCTTGAGCTTTATTTGTGAGTGGCTGTGAAGATCAGAGTGAGTTGGTAACACTTTATAATAAGTATACAGTAATAAAGTACTTACAAATCATTAATAAACTATTAGTTTATAGTCTACATTGTAGTCTCTACATTGTTATTTGGCTATTTATAAATGGCAAGTTCTTAATTCATTGTCACTGTAATTAACACAATTATTATTGTTTTATTAGCTTGTAGTAAAGGAATTGTTAATTGGTTATTGGGAGTAAATAGTTCTCACTTTAGATTAGGTCACAGAAAATGGGAAAAAGTCATTAATTAAGTGCTTTAAACCAACCTTTATTGGACATTAATTGCAATTATTTTCAGTGTTCGTTAAAATGTTTAAAACACATTAAAGAACACACACACACACACGTTAGCATACTGTATGTGGTTTACAAGGACTCTCCATAGGCGTAATGGTTTTTATATTGTACAAAGTGTCAATTCTATCCCCCTACACTACCCCTACCCCTAAACCTACCCATTAGAGGGCTGCATTGGGATTGAAAAAAGAAATATCTTGTGGGGAGTGGGCAGTTTTACCTTTGCTGCGGGTGGGAGTGGGCAGTCAAATAATACAGCTTGGGTATTCTGAATGTTTAGCATAGCCTTAATGTTTGTGTAATTTTTACACAATTTCGATCAATTGTAACAGAATGTTTGCAGGTGTGGGAGGAAGTGGATACCAACATTGCGAGTGGAGTGGAGTGGAACACACACGTTGTGGGAGCGGGCGGTAATGGCCTGAAATTTAGAGGGAGCAGGATTAAGAAAACAGTCCCGCATAGGGCACTACTACTCATCACAGAAAACTATATATATATATATATATATATATATATATATACACAGTATATATACATTTTAAGATCACTTAATACTTATGCAATTAATGTCTAATAAAGGTTGGTTTAAAGCACTTAATTAATGATATTTTCCCATTTTCTGTGACCTAATCTAAAGTGAGAACTATTTACAATTAATAAATTGTTAACAAAGCATAAATAACTCTTTACATATGAGATAATTAAACAATAATAATTTGGTTAATTACAGTGATAATGAAAGATGAACTCACTATTTGTATTTAGCCTATTAATATACTAACAGTGTAGAAACTACAATATATTAAAGGATTAGTTCACTTCAGAATTAAAATTTCCTGATAATTTACTCACCCCCTGTCACGGAGTCACAGCCAGCACCCACCAACACCAACGCATCGTCACCAGATCTACATGCTCCACCCACTCGTTCACAGCCCCCGAAATTTTAATCACCTGCACCTCATCAGACTCACTGCATAAAGACTCTCACTCCCTGCAACTCATTGTCTGGTCTCATCTCCTTACCTGATACTCACCTGAGTTTCCCGTTTCCTCTGCCATTCGTCTTCCTTCGTCTGTTCTCCGTGGATCCTTCTCCTGCAAAAGACAACATCTGTTATTTCATCAGCTAAGTGACTGTTCAAATTGCTTGTTCATATACTCACCTGCATTCTCCATTTGCTAGTGTCCCAGCCTTTCAATAAACACCTGTTGTGCACTTACCTGTCTGCCTCAGTCTGTGTCCCTGACACCCCCGTGTCATCCAAAATGTTTAGGTCTTTCTTTCTTCAGTTGAAAAGAAATTAAGGTATTTGAGGAAAACATTCCAGGATTTTTCTCCATATAGTGGAGTTCACTGGAGTTTAACGGGTTGAAGGTCATTGGGGTGAATAAATTATCAGGAAATTTTCATTCAGACGTGAACTAATCCTTTAACTATGAATTAATTAACTATAAACTAATATTTTGCAAATGATTTGTAAGTACTTTATTACTGTATACTTCCTATAAAGTGTTACCGATTCAGCTCTTGAGAGAGCTGGATGCATACATAATGAGTTTGCAGTGGGAAGCCTTGCTCTTTCTTGATTTCTGGGTTGAGGTCTATCAAGTCCTTCAGTGCTTAGGCTGGCAAGTCTTCCGTATCCAAGTTACGAAGAAAGTGTAAACAGCGTCGCGTCAGTTACACTTTTTTCGTAAGTTGAATCCCTATTATTATTATCCCTATAAGGCGTAGGACGTAGCGTAAGCTTTGTGAACTGCAAGAGTTTTACACTTTCTTCATACGTTGAATACCGAAGGCGGTCTGAAGGAAGCTAGATTTTTTTCTTTATAACTCGTTTAAATACGGATATTTTTCTTACACAAACACATCGCTTCGCTTCAGAAGGCCTTTATTAACACGTTTATGAAGGATGGATGTAGATGGAAGCACTTTCTTCAGCTCATACTTGTTTGGTAACGCTCACTGCCATTATAAAGCGAGGATGCGTCAGGATATTTCTTAATATTTCTTCGATTATGTTCATCAGAATACACCTAGGATGGCTTGAGGGTGAGTGATTTTCATTTGAAAGTGAACTAATCCTTTAACATCCTTATAGCTTCATTAACTGAGTTCCCTCGAAAGAGACCGTCTGGGGCTTCCATATGTTTCGCTCCATGTGATGTCATACTAGGACTACTGTCAGCTAAAACGTTTTCCATGATTTTACATGTGCTTCAGACACCTGGTTCTGTGGGACATGTCCCCATATCATCAGCAACTCACACAGCATCTTGTTCCATTCTCAGGGAACCCCCAGAAGTTTTCTTTATGTCTTTTATTATTCTTTTCTTTCTTTCTTTCTAGAAAATACTCAACACTGACAATGATTTTGAAGTTTTTACCGTAAGTTCCAATGCATTCTTTGACCACGAATTAAATCTTGAACATAGTGAAACAGGTAAATATCCATTGCCTTTATTTTACCATTATTTATGACAAAAAATATATTTTTGATTAATCTGAAGATGAATCATTTATGAACCAGACAAAGCTCTGATGAAATTAATCAAATATACACTTGTGTTTTGGAAACTGTATATATCTGTAGAAATCCCAAAGCTGCAGGATGATCTGAGGATTCTTAACAAGAACATCAAGAGAGAACTGACCAGAGATTATGTCAATGAAGCAAAGGGAGTTTTGTCCTTGATCCAAAGTGTTCAACTGGATACAGAAAAGAAAACGGCTGAAACGAAAGCCAGCATTCACACGGAATTAAAGAAGAACCTACTGAAGGAACGAAATAAATTGGACAAGTGTTTTGTCAACATTCATAAGGTTCTGGAACAATGTCTCTCAAAGGGAGTGGAAAAATCAGTGCAATCATGTGTTGCTACCACAAAGGACAAGATATTACACAATAAGGATGGAAGAAGATTCCATAAAATACTTCAATCTTTGTGCAAGAATGGTGGATGCTATTTGTCGAAAAATAGGGATGTATACCTAGATCTAAACAAGGAATTGGCCAAAAACCTGCATGAATGTCTTCAAGATGATTTCAAGAAGATTTTTCCAATTTCAGCCACTACGAGACAGTCCCACAATGAGCTTTCCTCAGGAAGTGCTGTTTCTGGGTCTGTAGCTTTAAATGCTAATGAGGAGGAGAGAGGTGGGGCAAGGTGGAGGCTGCGCCAAGAAGAGTTGGTACTGATCCAGACTTTATTTTCAGACGTTCAGAAAGGCCAGCACTGTATACAAGCTCGCTCGTTTACAAGCCATGATGTCTCGAGGAAAAAAAGCAAACGCGCCCCCTTGCACGGTAGTAGCTCATTTTCTCATGGGCGGGCAAAGCAGAGAAAGGGGAGTGTGCATGGAAAAACAGGGAAGTCACTGCAGGAGGAGATTGATAAGTTCAGTATTATCCAGAGTGCCTCTGCTCCTCCCAGATCTTCCTTGTTACGACACATTCAGAAATACATCAGAGCAGAGGAAACTCAACTGAAGGCAAGGCTCAACAGAGAAATTGTTGAGACAAAGAAGGAAATCTACTCATCAATCCAAAAAACTATTGAGAAGGAAATGGCTTCTTACTATGAAGAAGCTGCAGCAGTGACTGGAATCGGATCCATGAAGAAAAGGCAAGAAATGTTGATAACCACAGTTGACGTGATAAAACATGACATGTTCAACAAGGCAAAAAAGGAAGTGCTTAAAAAGTTCAATAACTTAAAGCTGTACATAAATGATGCTCTTAAATCAGAACTGAAGAAATCAATGGAACTCTCACTGTTACAAACCAGCAAAATCACATTAATGGGTAAGAGAGAATGTAATCCTGTTACACCACAGAAACAAGTAAAGAATTATATTCCCAATCACTACCTTCTCTTAATCATCACAAGCAATAAAATGACATCCTGTATTATGGCTTTTCTAGATGTTTCCAGAGAGACTGAACAGCTAGAGACACTGTCAGGACAACTGGAGAGACTGTCAGAGCAATAAAAGGCCCAAGAGAAAGGGCACAAGTAACAGAACAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_02750776_02767145.mRNA True 4396 mRNA 0.38 9 2750740 2770053

Neighbor

gene id symbol gene type direction distance location
CI01000092_02673622_02702051 URB1 coding downstream 48689 2673524 ~ 2702051 (-)
CI01000092_02616905_02658519 WDR62 coding downstream 91866 2616818 ~ 2658874 (-)
CI01000092_02602158_02608405 NA coding downstream 142335 2601686 ~ 2608405 (-)
CI01000092_02570666_02599836 NA coding downstream 150904 2570196 ~ 2599836 (-)
CI01000092_02522204_02531634 ARRB1 coding downstream 219106 2522123 ~ 2531634 (-)
CI01000092_02771083_02773297 NA coding upstream 999 2771052 ~ 2777076 (-)
CI01000092_02839795_02842383 NA coding upstream 69706 2839759 ~ 2842409 (-)
CI01000092_02851435_02865690 PHKG1B, PHKG1, PHKG1A coding upstream 80389 2850442 ~ 2865690 (-)
CI01000092_02868492_02873015 NA coding upstream 98420 2868473 ~ 2873015 (-)
CI01000092_02878710_02896014 HNRNPL2, HNRNPL coding upstream 108309 2878362 ~ 2896494 (-)
G305781 NA non-coding downstream 3043 2747412 ~ 2747697 (-)
G305780 NA non-coding downstream 7926 2742566 ~ 2742814 (-)
G305776 NA non-coding downstream 16944 2733541 ~ 2733796 (-)
G305775 NA non-coding downstream 17905 2732633 ~ 2732835 (-)
G305773 NA non-coding downstream 23035 2727437 ~ 2727705 (-)
G305831 NA non-coding upstream 18429 2788482 ~ 2788852 (-)
G305835 NA non-coding upstream 26633 2796686 ~ 2796955 (-)
G305836 NA non-coding upstream 30577 2800630 ~ 2802757 (-)
G305838 NA non-coding upstream 42747 2812800 ~ 2813059 (-)
G305842 NA non-coding upstream 51401 2821454 ~ 2821745 (-)
G305772 NA other downstream 25796 2724594 ~ 2724944 (-)
G304459 NA other downstream 1518448 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 1653822 1086404 ~ 1097333 (-)
G304369 NA other downstream 1691820 1058325 ~ 1058920 (-)
G304368 NA other downstream 1695018 1055304 ~ 1055722 (-)
G306014 NA other upstream 907821 3677874 ~ 3679488 (-)
G306679 NA other upstream 1726361 4496414 ~ 4505953 (-)
G306792 NA other upstream 2034342 4804395 ~ 4865973 (-)
G306902 NA other upstream 2383615 5153668 ~ 5154133 (-)

Expression


Co-expression Network