CI01000092_03086245_03088783


Basic Information

Item Value
gene id CI01000092_03086245_03088783
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 3086208 ~ 3089118 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_03086245_03088783.mRNA
ATACAAATTGCTCAAGCCAGAGGATTGGGCATTAGACTGTCAAATGTCATTGGAAAAGCGTAAAGAGGCTTTTCTGAAACACTATAGTTTTGGCTCACCCTGACTTCAGCAAGCCATTTCTTCTAATGACTGATGCATCCATTGATGTTAATGGTGAACTCAAACCAAGACCAATTGCATTTGCAAGCAAATCCCTAAGCTGCTCTCAAGCCTGATACCCATTACATCAGTTAAAATTCTTTGCACTTAAATAGGCAGTATGTGATAAGTTTCCTGATTGGTTAAAAGGGGCTCCCATCACAGTATTAAACAATAATAATCCATTGACATACATAATGACTAAGCCCAAGCTAGACACTTGCAAGCAATGGTGGGCCTTGAAGTTAGCACCTTTTGACTTTGACCTTAAGTACATTCCAGGATCACAGCACATTCCAGCAGATCTCCTGAGTTGTGAGCCATTTGCAAAAGTGGTCAGGTTTGCCATGGGGACACAAATGGCACCATTACTTGAGAATAACCCAAATGTCCCGCAAATGCAAATACAACTGACTTGTTGGGATAGTTCAGGCAAAAATAAAAATCTTGTCGAACCAGGCAACAAGGTGAATCACATGAGCTTTGAATCTGTTCATTATGCATTCATAATGCATTCAAGCTATCTGTCAGTTCTCAAGAGCAACATGATTGTGAGTATGAGAGAAGAGTCAGATAAGAATTGTCCCAATGCTCAAGCCATATGGTGTTTGGTCAGTTCACCCTTCCAGTGCTTTCTATTGAAGATACAAGGAAGAAGCAACGATGATGCATTATGGGTAATCTACTTCAAGAGAAAAAGATGGTCACGGATCCACTCAGACCAAGGAGCAAATTTTGAGAGTACGCTCATATCTAAGCTGCAGAAAAGTATCAGAAGTAAAGAAATCTCATACCACCCCCTACCATCCTATGGGAAATGGCCAAACAGAAAGTGGTATATTCCCCTGGTGCTGCACTCTTTAGCCTGTGGGAAGCACCTTGAGGAGAGTTTGTTAAACAGAAAACAGAGATGATTGTTGTAACACTCTGCCATTTTATGCTTGCAAAAAA

Function

NR:

description
Retrovirus polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_03086245_03088783.mRNA True 1089 mRNA 0.41 5 3086208 3089118

Neighbor

gene id symbol gene type direction distance location
CI01000092_02933754_02957495 BRWD1 coding downstream 128571 2933754 ~ 2957674 (-)
CI01000092_02902889_02909457 RET2, RBP2, RBP2A coding downstream 176719 2902812 ~ 2909489 (-)
CI01000092_02878710_02896014 HNRNPL2, HNRNPL coding downstream 189714 2878362 ~ 2896494 (-)
CI01000092_02868492_02873015 NA coding downstream 213193 2868473 ~ 2873015 (-)
CI01000092_02851435_02865690 PHKG1B, PHKG1, PHKG1A coding downstream 220518 2850442 ~ 2865690 (-)
CI01000092_03103762_03184280 DSCAMB, DSCAM coding upstream 13987 3103105 ~ 3184280 (-)
CI01000092_03224848_03225687 NA coding upstream 135343 3224461 ~ 3225795 (-)
CI01000092_03271224_03274775 DSCAM coding upstream 182106 3271224 ~ 3275286 (-)
CI01000092_03307794_03308422 NA coding upstream 218084 3307202 ~ 3308514 (-)
CI01000092_03365550_03416277 ATM coding upstream 275889 3365007 ~ 3416277 (-)
G305813 NA non-coding downstream 2562 3051910 ~ 3083646 (-)
G305898 NA non-coding downstream 41255 3044742 ~ 3044953 (-)
G305897 NA non-coding downstream 41710 3044240 ~ 3044498 (-)
G305896 NA non-coding downstream 44007 3041986 ~ 3042201 (-)
G305894 NA non-coding downstream 44914 3041068 ~ 3041294 (-)
G305817 NA non-coding upstream 137716 3226834 ~ 3275358 (-)
G305922 NA non-coding upstream 220975 3310093 ~ 3310299 (-)
G305811 NA non-coding upstream 267728 3356846 ~ 3357075 (-)
G305805 NA non-coding upstream 268249 3357367 ~ 3359859 (-)
G305772 NA other downstream 361264 2724594 ~ 2724944 (-)
G304459 NA other downstream 1853916 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 1989290 1086404 ~ 1097333 (-)
G304369 NA other downstream 2027288 1058325 ~ 1058920 (-)
G304368 NA other downstream 2030486 1055304 ~ 1055722 (-)
G306014 NA other upstream 588756 3677874 ~ 3679488 (-)
G306679 NA other upstream 1407296 4496414 ~ 4505953 (-)
G306792 NA other upstream 1715277 4804395 ~ 4865973 (-)
G306902 NA other upstream 2064550 5153668 ~ 5154133 (-)

Expression


Co-expression Network