CI01000092_03614992_03615400


Basic Information

Item Value
gene id CI01000092_03614992_03615400
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 3614437 ~ 3616983 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_03614992_03615400.mRNA
AGTCATAAATAAGAGGAACATATTGCTGTAATTTGCCCTGCAATTAAAACAATTACATGGCTGTTATTTATTATAGTAAGTTAAGTTGGTACAATTGGCAGTTAGTGTTATCAGCTGATTGGTACCTGATTGCATTTGTCTCGTTTCTTTTCTACTTTCTATTTTGACAGAGAAAAAAAGCCATTATTTCACACAACAAAACGTCCAACCAAGTGGCATTGATTTTAAAGGAAGATCGCAGTTGGTGTTAAACTGTACAGATATTAAGAGGATATCTGCACTCTAAAAATGTGGGGTTAAAAACAACCCAAGTTGGGTTAAATATGGAAAAATCCAGCAGTTGGGTTAAATGTTTGACTAATCTGCTGGCCAGTTTTATTTAACCCAACTATTGTTTAAAAATTACTATATGGCTGGCTTAAAATTAACCCAAAAAAGGTTGGAAATTAAAAATCAGACACATAATTACTAGAGGCAATAATAATAATCAAAAAGTGAATATTTATTAATAAGCAAATTAATAAATGTTTATTGTTTAATTATTATTTATTAAAATTATTAAGTCAAAGTCAAAAGTCAAACATTTAACCCAACCACTGGGTCAAAACAACCCAATTGCTGGGTTTGTCCATTTTTAACCCAACTTGGGTTATTTTTAACCAAGCATTTTTTAGTGTGGGAATGGTTTACAATTTATTTATTTATTTATTTTGCTTTAGTCTGTAAAAGTAATTTTTGAATATTAATTTATTTTGTTTTATGATTTTTTAATACCAACACCATTAACCCCTTCCCCCAATCCATATTTAATTGGAAGCATTTAAATACAACAACAACAAAATGGCATAGAATGTGAAACATTTTATTTTAAAACCGCAAACAAGTTGTAATTTATTATTGTGAGTTAGGGTTAATTTTTCTATACCTCAGAATGTATTTTTGTCATATAAACCCTTTATATTTTTACACAGACACTGACAACTTCTACTGTCCTCTCAAGACAATAATAATAATACTCAATTTATTCCCTCAAGCACATTTTAAAGTGGTTAAACTAACAACTCACACTGTGTTACATCTCAATAAACAATGCTGACTATTAGTAATGTAAAAAAAAAAAAAACACCACTATGTCACACTTTACCATCTATTAAAAAAGAAGACGTAGAAATTCTGTGGCTATTTTGACACATTCTGGTTATCAAACATAAGTGGAACATATACTTAACCTGTACAACAACTCTAGTTAGTTTTTTAGGACAACTGGGAATTTAATGCGAACTGTCTTCATTTATCCACTATAACATCACATTGACACCAGTTGTTAAATATGCAAACATGACTCAAAAAAGGCAAGTTTGTTTTGAGAAAATGTCTTTCATTTGTTTGCAGAAGTCATTTGCTTATATTTTCGAATCCAATACATTTTAAAATAAGTCTGCAAATACTTTTTTGGGCCACTATATGAATGTGGTGGTCCTGTGTGTAGCATATGATGTGACGCGTTTGCAGTGGAGAATAACGCATGTGTGTGATCTGCTCCAGACAGTGTTGCACATTATAGCCCACAATAATCAGACAAAATGATTCTACACCGGAATAGCGATGATGAAACTCGCTCCATCGCTCATCGTGGAGAGACGCATTTGAGCTCAACGCGTCGCTTCATGGACATCGATAGCGCGAAAAGGACGCGACATCATCTCAAACGCGCCGCTAACGCTGGATACTCGGCCCGCTTCACGCTTCTGCTGCTACGGTGTTTTTAAGGTGGGGTATCTTTACGCCTTCTCATCATATCCTAGTAGCCTATATTCATAACACAACCCAGTTTACAGAACCATAACATTTACGCGGATGTAATCATTTGTTATGGATGTAATTCGCGTTCCTCATTCACTCTAGAGCAGTAACACTTGCTCTGTTATTTTGGTTGATACTTTTAAAGTGGAAATAAGCAATCTTATCCACTACTCTCAAAGGCTATGATGTGCTTGCATTTATTTTTTAATGTCCCCAAAATCTCAAATGCTTTTGGACTAGAATATGAACATGGTATCAGTACATGTTTATGTTCCAATGCATGATCAGGTTGTAAAATGTTTTTTTTTTAAATGCTTTATTTCATCTAGAGAGAGTGTCTCATCTGCCGGTCTGGTGTGTGTTGTCCTCCGTCAGTGAGTGTGTGAGCTCGGCTTCCGTATCGCATGGAGAAGAGGGTAGGTCCTGTGTTTTCCCTTTATTTTCCAGATCCATTTCCCTGCTATTTTGATGCAAAGAATGTAGAGTTTGATGCTGTAGTGTGGATATTGTAAATCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_03614992_03615400.mRNA True 2324 mRNA 0.34 2 3614437 3616983

Neighbor

gene id symbol gene type direction distance location
CI01000092_03600064_03611514 MEIS3 coding downstream 2289 3599914 ~ 3612148 (-)
CI01000092_03418301_03428309 ATM coding downstream 186128 3418301 ~ 3428309 (-)
CI01000092_03365550_03416277 ATM coding downstream 198160 3365007 ~ 3416277 (-)
CI01000092_03307794_03308422 NA coding downstream 305923 3307202 ~ 3308514 (-)
CI01000092_03271224_03274775 DSCAM coding downstream 339151 3271224 ~ 3275286 (-)
CI01000092_03630767_03645397 PRSS16 coding upstream 13643 3630626 ~ 3646156 (-)
CI01000092_03652598_03660979 ECH1 coding upstream 35615 3652598 ~ 3661104 (-)
CI01000092_03682820_03688497 NA coding upstream 65431 3682263 ~ 3688531 (-)
CI01000092_03702024_03712418 NA coding upstream 83963 3700946 ~ 3712418 (-)
CI01000092_03733899_03743505 NA coding upstream 115974 3732957 ~ 3743557 (-)
G305810 NA non-coding downstream 15708 3597328 ~ 3598729 (-)
G306053 NA non-coding downstream 23458 3590733 ~ 3590979 (-)
G306051 NA non-coding downstream 27328 3586867 ~ 3587109 (-)
G306050 NA non-coding downstream 36906 3577308 ~ 3577531 (-)
G306041 NA non-coding downstream 61858 3550840 ~ 3552579 (-)
G306017 NA non-coding upstream 54462 3671445 ~ 3674434 (-)
G306010 NA non-coding upstream 59784 3676767 ~ 3677768 (-)
G306083 NA non-coding upstream 108044 3725027 ~ 3725677 (-)
G306089 NA non-coding upstream 125497 3742480 ~ 3743248 (-)
G305772 NA other downstream 889493 2724594 ~ 2724944 (-)
G304459 NA other downstream 2382145 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 2517519 1086404 ~ 1097333 (-)
G304369 NA other downstream 2555517 1058325 ~ 1058920 (-)
G304368 NA other downstream 2558715 1055304 ~ 1055722 (-)
G306014 NA other upstream 60891 3677874 ~ 3679488 (-)
G306679 NA other upstream 879431 4496414 ~ 4505953 (-)
G306792 NA other upstream 1187412 4804395 ~ 4865973 (-)
G306902 NA other upstream 1536685 5153668 ~ 5154133 (-)

Expression


Co-expression Network