CI01000092_03702024_03712418


Basic Information

Item Value
gene id CI01000092_03702024_03712418
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 3700946 ~ 3712418 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000092_03702024_03712418.mRNA
AGTACAGCAGAAGGAACCAGTAAATGAACAGCTATGCAGGACACCAGAACAGAGAATCAGCTTCACAGAGAGCAGCATTGAATCTGAACTTGGTGAAGTTCTGGACAAATTCAAATCAAATCTGATAAAGAAGTTTCAGTGTCTATATGAGGGAACATCAAAGCAGGGAAACCCGACACTCCTGAATGAGATCTACACAGAGCTTTACATCACAGAGAGTGAATATGGAGAGATCAATAATGAGCATGAGGTGAGACAGATTGAGACTCAATCCAGGAGAGCAGAAACAGAGGACACATCGATCAAATGCAGTGACATCTTTAGACCTTTACCTGGACAAGACAAACCCATCAGAACTGTGCTGACAAAGGGAGTCGCTGGCATTGGAAAAACAGTCTCTGTGCAAAAGTTTGTCCTGGACTGGGCTGAAGGGAAAGAGAATCAGGACATCCAGCTCATATTTCCACTTCCTTTCAGAGAGCTCAATTTAATACGGGACCATAGCCTCAGCCTTTTAGATCTACTTCATGTTTTTTTCGCTGAAACAAAAAATTTGGATATTTCCAGCAGTGAATATAAAGTGTCATTCATCTTTGATGGTCTGGATGAGTGTCGTCTGTCTCTGGATTTTCAGAGCGATGTGAGGATGTGTGGTGTGACTGAATCAGCCTCAGTGGGTGTGCTGCTGACGAACCTCATTGTGGGTAATCTGCTTCCCTCTGCTCTCATCTGGATCACCTCCAGACCAGCAGCAGCTGATCTCGTCCCCTCTGAGTGTGTCCATCGAGTGACAGAGGTACGAGGCTTCAGTGACCCACAGAAGGAGGAATACTTAAGGAAGAGAATCAGTGATCAGAGTCTGGCCAACAGGATCATCTCACACCTGAAGTCATCAAGAAGCCTCTTTATTATGTGCCACATCCCAGTGTTCTGCTGGATCTCAGCCATTGTTCTAGAGAAGATGTTGAGTGAAGCACAGAGTGGAGAGATTCCCAAGACTCTCACTCAAATGTACACACACTTCCTGATAATTCAGACCAACATCAAACACGAGAAGGATTATGAGAAGACAGTGAAAGATGAAGACATGTTTCTCAAACTGGGGAAGCTTGCTTTTCAGCAGCTTAGGAAAGGAAATCTGATCTTCTATGAGGAAGACCTGAGAGAGTGTGGCATTGATGCGACAGAAGCATCAGTGTACTCAGGATTGTGCACTCAGATCTTCAGAGAGGAGTTTGTGTTGTATGAAGAGAAAATGTACTGCTTTGTTCATCTGAGCATTCAGGAACATCTTGCAGCTCTATATGTGCATCTGTCCTTCGTAAACAATAACAGAAACATGTTTGACCAAAACATTTCACCAACTCATGAAGCCAAGAAAAAGAAGATTTCAATGTCAGACCTGCATCAGAGAGCTGTGGATGAGGCGTTAGATAGTAAAAATGGACATTTAGATCTTTTCCTTCGTTTCCTATTAGGCCTCTCAATGGAGTCCAATCAGAATCTCTTACAAGGTGCATTATCACAGACTGGAAGCACCTCTCACACTAATGATGGAACCATTGTGTTCATCCAGATGAGAATCTGGTGTGATCCATCTCCAGAGAAATCCATAAATCTGTTCCACTGTCTGAATGAACTGGGTGATCATTCCCTCGTGAAAGAAATCCAGCAATACATTAAATTTGGTAAAATAAAAGAAATTGAGCTCTCACCTTCACAGTGGTCTGCTTTGGTTTATGTTTTGCTGACGTCAGAGCAGGAAACTGATGTGTTTCAACTGAGCAGATATACAGGAAAACACATCACTCCAGATGAAGCTCTTCTGAAGCTGCTGCCTGTGATTGAAGCATCAAGATCAGCTCACTCACAGTATTCATGCCTGAGAGAACTGGATCTATCTGGTAATAAACTTGGAGACTCAAGAGTGAAGTTGCTCTCTTCTGGGCTGAAGAATCCACGCTGTAAACTGGAGATACTGAAGGACCATTTGGAGCCAGAAAGTGGAAGGGTCAGTTCTTACAAAGTGCTCTTTCAGGGCCACATCTGCTTGGAGATCAACCAATTGCATCTGGAGAGACCCAGCATTTACCCATTTAAAGTGCTGTGTGACTTCTTTCGAGAACCCCCTGACATCTGTGATGAGAAATGTGTTCTGAATGAACATGGGATAATGGGGTCGGAAGCGGGAGATTTCTCGCAGTTAACACTCAAACACGGGTGTAAATGTATGCCTGAAGCCACTTTGTCTGTGGAGGATTGCTTGATCGCCGTGAGTGAGGCTGTCGGTGGTGCTAATATTAGATCTGCCTCCCGAATGAATAAAGCCATTGTGTTCTTTCTCAGTGAAAGCCAAATGGTGAATGACTTGATTGAAACTGGATTGGTAATCAAAAATATTTTCGTACCTGTCTTGTCTTTGTCAAGCCCAGCCAAGAAGGTAATTTTATCAAACGTACCTCCGTTTGTTAAAAACGAAAAACTAGAGCAAATAATCCAGAGATACGGCAAAATAGTGAGTTCTATAAAAATGATCCCTCTTGGATGTAAAAACCCCGATATTAAACATGTGATGTCTTTTCGGCATCAGGTTTTTATGATTTTGAACTCTCAGAGTGATCCGTTAAATCTGTCAGTAAAATTAAGCATTGATGGCAAAGATAACACTATTTTTATTAGTTCAGATTCGATGAGATGCTTTGTGTGTGGTGAATTTGGACACGTTAGGCAAACTTGCCCGAGACGAGACAGACCGACGGGCCTTCTTGCGGCTCCAGCTGCAGATGTGGAGAACAGCATGAGGGTGGCCGGCGAGGATATTGTTGCGACGGCTGAGGCGTCAGAACCTCAGCCGGGCGAAGCGTTTTCGGCGCCAGGAAATCAAACGCAGTCTGATAAAATTGTGAACGATGCAACTATTGATAACTCGTTTAAACAGAGTCAAGATGACCTTTTATCTCAAGAATCTGTGGATTTAATGGATGACTCTGGCAATGAACATGAGGACACTGAGATAATGGACAATGACGCGATGGATTCAGAGCTTGTAACTGGAGGACTTCGTAAACCAAAAATTGAGACATATTTTCCAGATTTAAAACTCTTTCTGTTGTCTGGTACCATGGCTATGAGAAAAGCTTCCTTTGATGAGCTTGACAAACCCAAACGGTACCGCCTTAAGAAACTTCTTAGTAATGTTAGAAGTTCTCTGAATTTACAAGGTCCTTCTGGAGTTTTGTTTCCCAAGTTATTTGTGTCTCCCAAGGTTGGTTTGGAAGATGATCATGAAGGAAAGCTGCTGACATTTAACAGACTACAAGAGCTTGATTTTCAGGTGGTCGGAAAAAGAGATTTATATCAGTTATGTGTTAAAGTGGATCATTTTGAGCATATTAAGGGCAGAGTGGATACAAAATGGAGGGAATTTTTAATGCTTTTTCTAATGCTTTTTCATCTTCTTGGAGGCTTTTTTACAAGGGTCCTCTACCCAAACGATCTGGAGACTTACAGTGGAGGTTAACCCTTTGAATAAACAAACAAACAAAAATAAATAAATAAATAAATAACAGGCTACTTTTTACACATGAATCTAAAACCGCAAGTAATGAGTTGCTAATTGCTAATTTCTTTAACTTCGCAAACAACTAGGCTATATGTTATAAACTGTTAGCCAAATGAATCATTTACTCATCTGATTTGTTCAAATACACAGTTCTTTGAGGAACAAAACTCTGTGTTGCTCGGGGAGACAGCAATTCTGCTGTTTGTTTCTTTGATGGAGCAAAAACAATGTGTTGTGTCTATGAAAGTTACTCAGTAACTTGTTGTTTATTAAACTATTGTATTAAATCAGTGTAACATTTGCGATTGTGCACATCGCAAAAATAGCACTCTTGCTTGTGTGACAACTCCAATATCTTATATTATAAATATAAAAGAGAGTAACTCATTAAATGGATTTTTTAACTCATTTTGATGACATTTTTTCCCTGTTATATTCTGTTGGCAGTGAGACGGGATAGAGCGCTCAAAACTCTTCAGATTGCATAATTTAGTGGAAAAATATCAGAAGTTATCATTCTCTGTAAAGAAATAAGGCGTGAACATAATGTATGAGATAACAAAAGAGAACTGTCTTAAACTGGCAAGACTTAAGTCAGGCTGTCTAGTTTCTAAATAACAAGCAATTTTTTTTTTATGCCAAGTGGATGAAAAGCATGTTCTCTCTCAAAATTTGGAGCTGAAATATTGAAATCAGTTATTTGGCGTGGGGTCAGGGAGGACCAAACTTCTGATTGAAAAGTGATCGTGCTGCCTTAAAATATTACGTTTAATCAACTTCAATCAAAGTTTTACTTAGTGACAACTTGGATATTTGAGTTATCTCAACTTAAATTCAGCAAAGTTATTCTAATGCAAATTTTTAAGTTCTGATATCTAATTGCAACAATATTTTTGCAGTGTATAAATTCAGAGTAGGCGGTTGTAAATCAGAAAAATAATAACTACACCTGTTTCTGAATATTGCTTGATTATCAAACAGGCTATTGATCTAAATAGACTATATGACGAAGTACAAAAAATGACACATTAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000092_03702024_03712418.mRNA True 4598 mRNA 0.40 8 3700946 3712418

Neighbor

gene id symbol gene type direction distance location
CI01000092_03682820_03688497 NA coding downstream 12415 3682263 ~ 3688531 (-)
CI01000092_03652598_03660979 ECH1 coding downstream 39842 3652598 ~ 3661104 (-)
CI01000092_03630767_03645397 PRSS16 coding downstream 54790 3630626 ~ 3646156 (-)
CI01000092_03614992_03615400 NA coding downstream 83963 3614437 ~ 3616983 (-)
CI01000092_03600064_03611514 MEIS3 coding downstream 88798 3599914 ~ 3612148 (-)
CI01000092_03733899_03743505 NA coding upstream 20539 3732957 ~ 3743557 (-)
CI01000092_03750015_03753913 CYP2Y3 coding upstream 36822 3749240 ~ 3753976 (-)
CI01000092_03762168_03785262 NA coding upstream 48402 3760820 ~ 3785407 (-)
CI01000092_03841542_03853786 BACE1 coding upstream 127919 3840337 ~ 3853992 (-)
CI01000092_03855138_03858761 TBX10 coding upstream 142720 3855138 ~ 3858761 (-)
G306010 NA non-coding downstream 23178 3676767 ~ 3677768 (-)
G306017 NA non-coding downstream 26512 3671445 ~ 3674434 (-)
G305810 NA non-coding downstream 102217 3597328 ~ 3598729 (-)
G306053 NA non-coding downstream 109967 3590733 ~ 3590979 (-)
G306083 NA non-coding upstream 12609 3725027 ~ 3725677 (-)
G306089 NA non-coding upstream 30062 3742480 ~ 3743248 (-)
G306120 NA non-coding upstream 302367 4014785 ~ 4015061 (-)
G306121 NA non-coding upstream 313346 4025764 ~ 4026076 (-)
G306123 NA non-coding upstream 314956 4027374 ~ 4027599 (-)
G306014 NA other downstream 21458 3677874 ~ 3679488 (-)
G305772 NA other downstream 976002 2724594 ~ 2724944 (-)
G304459 NA other downstream 2468654 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 2604028 1086404 ~ 1097333 (-)
G304369 NA other downstream 2642026 1058325 ~ 1058920 (-)
G306679 NA other upstream 783996 4496414 ~ 4505953 (-)
G306792 NA other upstream 1091977 4804395 ~ 4865973 (-)
G306902 NA other upstream 1441250 5153668 ~ 5154133 (-)

Expression


Co-expression Network