G304012


Basic Information

Item Value
gene id G304012
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 91635 ~ 93404 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU345420
CGCCCTTAATTATGCAGAACTTTAAGGCTTAATATAATTTAAACGGATGAGTTATAAAAAAATTCACCTCAGAGTTGTCTTGAAGGGCAAAATTAGCAGTATAGACCAAAACCACAATTTGTACCAACCTGTAAACGTTTTTTTCTGCTGTAAGTTTTTCTGCTGTAGCCATTTTAACATCGGACTCAATGAGATTGACTCTCTTTTGGAGCCTGTCCCTAGCGGCCAGTCGATTAATTGCAGTTTAAGTCACTTCCGTATTGGCTTCACAAGAAACTGGGGGAGGTTGCCGCTTGGTTCTCCCTTAGTCTATGTGTCATGTTCTGATTGGTTGTTTATGGTCATGTGGTTTTCAGTTCTGTTCTGTCCCTTGTTCCTTGTGTCACTTCCCCATTGGTTGCCATAGTCATGTGGTCACTAAGTTCATGTATTTAAGCCATTGTCTTCCCCATGTTACTTGGTTGTGTATTGTTAATGTAATCCTGCTGTCGGTGAGTGTTCATGGTCTGGTCTGGTCTGTTCATGGTCTGTTCATGGTCTGTTCATGGTCATGGTCAGGTCAGGTCAGGTCTGTTCATGGTCAGGTCAGGTCAGGTCTGTTCATCAAAAAAAGAAGGCAAATTTAGCAAGTCCTCCCAGATAGCACACATACATGTGGCCGATGTCGGCCCCAGAGCGGAACGTCGGGCTCATATCTATAACATCTAATAAGGATCGGCCAGGCATAGGCGCGTGTCTTCAGTCAGTGCTCTATTTCCAGCTTGTCGGCTTTGGGTCGGATCACGACTGCAGGCCGATGCCGCGCTTATCTGTTTGCGCGTGACCATTCATCTCTGCAACCGACGAGAGAAATGGCGACTCCGGCGACATCTGTGGTTTTCAGGAGTGAACAAATCTACAACACTGGAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU345420 True 911 lncRNA 0.46 2 91635 93404

Neighbor

gene id symbol gene type direction distance location
CI01000092_00015546_00042149 NA coding downstream 49486 15401 ~ 42149 (-)
CI01000092_00103480_00114306 NA coding upstream 8764 102168 ~ 114742 (-)
CI01000092_00116452_00128007 NA coding upstream 21931 115335 ~ 128007 (-)
CI01000092_00156990_00162891 MLNR coding upstream 63586 156990 ~ 162891 (-)
CI01000092_00174874_00180333 FNDC3A coding upstream 81470 174874 ~ 180333 (-)
CI01000092_00237358_00269420 NA coding upstream 142908 236312 ~ 271283 (-)
G304004 NA non-coding downstream 5370 79513 ~ 86265 (-)
G304025 NA non-coding downstream 69187 22159 ~ 22448 (-)
G304022 NA non-coding downstream 73011 18422 ~ 18624 (-)
G304021 NA non-coding downstream 74219 17188 ~ 17416 (-)
G304020 NA non-coding downstream 74497 16924 ~ 17138 (-)
G304050 NA non-coding upstream 173260 266664 ~ 266947 (-)
G304052 NA non-coding upstream 187831 281235 ~ 281438 (-)
G304053 NA non-coding upstream 188115 281519 ~ 282555 (-)
G304057 NA non-coding upstream 243611 337015 ~ 337687 (-)
CI01000092_00409098_00411916 STOML3A, STOM, STOML3B, STOML3 non-coding upstream 312860 406264 ~ 411916 (-)
G304368 NA other upstream 961900 1055304 ~ 1055722 (-)
G304369 NA other upstream 964921 1058325 ~ 1058920 (-)
CI01000092_01086701_01097333 CLRN1 other upstream 993258 1086404 ~ 1097333 (-)
G304459 NA other upstream 1138496 1231900 ~ 1232292 (-)
G305772 NA other upstream 2631190 2724594 ~ 2724944 (-)

Expression


Co-expression Network