G304724


Basic Information

Item Value
gene id G304724
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 1881758 ~ 1883473 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU346234
CCAGGCATCTAAAGAGATGCGTTCAAAACTAAATATACTTTTACAAAACAAACAAACCAAAAAAAAAAAGGCATAAACTTGCTACATTATTTAATTCCTTTTGTGTCAGTTATAATGCTCCTAGTGTTTTGTTGACGGAAACCAGAAAATGCTGTAAAAAGGCAATATTTAAAAAGATGACATTATTACAAAGTACTGTTCAAATAAATATAATGTGTGCTTTACATCTCCACAGAATTCATACATATGCCACATTCTCTTTCAAATCCAGCAATAACTTTCAACAATGGAAGACAATCCAAGTGCTTCGAAAGCCAGTCAGAAACAATCCCAAATAACATCTTTGCATCAGTATCAATATAGTACAGTAATGCATAAGAATCTATTTTATCTTCTCCAATAGTACATCTGGCAACCTATAGAATTGTATAGAACTTAACTAGAAAAAAAAAAGGAAAAGGAAAGACTGCCTGACTGCAGAAATCAGACATGTTGGCACATTACAAAGAAGTATACAGGATTGAAATGATCTGTCTGTAATAAAAATGAGTTCAGGGTAAAAAGTAGGCAAGAGTAAATGTATGTGCATATAGATGTGGTCCAAATGAATGTCTATTACAGCAAAAGAAACATGGTTAAAGCTTTCTTTGATAGACACAAGTCACAAGATAGATCTCTCTAGTAAACAAAGCCTAACAGATAAAGTTGTGAAATGAAAGTAGCCCTTAAGAAAGTGAAGATCAAGCTAAAAGTGAAATATGTGGAAACTCCAAAAAAATATAATGACAGAAAACCAATGTCTTAAAGAAAATCCACATATTTGTTTTGCTAGTTGCCAAATCAAGTAAGCATGCATGATTTTTCGTTGTGGCGTTATATGCAAAGCATTTACAGAAGTATCCAAATGCAGTTACTTTATATCCTCTCAATTTGATTTATTATATTTTATTTAGATTACAGTTTGGAGAGTGTCAAAACACTTAAAATGTATTTAAAAAAAATTAAAATAAAAAAAAAAGTTAGGTTTTGTTTAAATAATAAAAGATATAAAACAATCAGATTTCTTTAGAAATCTTAACGGTCAACATTGTCGCACAATGCCTTTTAGAGTTTTAACATCCCAAACTATTTTATAGCTATTTTACTTAAAAGTAAAAACATTTGTACAGTTAGGCCCAAAACATACTCAACACAAACACGTGAACGCAACAGCTTTCTACTCAAGTTTGATTTCAAATAATGAAATGTGTAACAACATAATTCGTAATACAAGTGTTGCATTCTCAGCACTGCCATAAGGGGTGCTAGAGCATAAACCGTAATCTACGATCAGTTTCTCCGGTGAATTACTTACCACCTCCTTTGATGTTTATTTTCCTTCGCTCATTTCGTTAATACAGCAACACAAACTCCTTAATCAGAGATCTTAAGATCCCAACCTCCGCAGCTCTACCATTAGAGAAAGTCATTGAATAGCTGTTGGAGTTTTACGACAGTCACGGTCTGCAGATACCATACAAATAAAATTGTCCATGACTTCTTTTTTTTTTTTTTTAAAGCTTAAAACTACAAAAATAGTTGAACGAATTGTTACGCCTTTGTAGGTAACCGTGGATGTTTGTCTTAAAGTGGCTCTACCTTAAAGGGTCAGTTCACCCAAAAATTAAATTTCTGTCATTAATTACTCACCCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU346234 True 1694 lncRNA 0.32 2 1881758 1883473

Neighbor

gene id symbol gene type direction distance location
CI01000092_01866991_01869504 LIPT2 coding downstream 12254 1866901 ~ 1869535 (-)
CI01000092_01802304_01802591 NA coding downstream 77519 1800795 ~ 1804239 (-)
CI01000092_01588502_01599337 NA coding downstream 282421 1588473 ~ 1599337 (-)
CI01000092_01562366_01575276 RFFL coding downstream 306482 1562048 ~ 1575276 (-)
CI01000092_01488880_01522758 TFDP2 coding downstream 359000 1488880 ~ 1522758 (-)
CI01000092_01908289_01908682 DB2, DEFBL3 coding upstream 23838 1907311 ~ 1908691 (-)
CI01000092_01964262_01964863 NA coding upstream 80606 1964055 ~ 1964863 (-)
CI01000092_01981235_01981861 NA coding upstream 96990 1980463 ~ 1981861 (-)
CI01000092_02026073_02027161 NA coding upstream 142589 2026062 ~ 2027525 (-)
CI01000092_02039063_02039980 NA coding upstream 155367 2038840 ~ 2040333 (-)
G304746 NA non-coding downstream 17931 1863536 ~ 1863827 (-)
G304744 NA non-coding downstream 19610 1861859 ~ 1862148 (-)
G304742 NA non-coding downstream 23219 1858332 ~ 1858539 (-)
G304741 NA non-coding downstream 23847 1857687 ~ 1857911 (-)
G304727 NA non-coding upstream 1149 1884622 ~ 1890038 (-)
G304723 NA non-coding upstream 11253 1894726 ~ 1895987 (-)
G304750 NA non-coding upstream 13269 1896742 ~ 1896978 (-)
G304751 NA non-coding upstream 14343 1897816 ~ 1898037 (-)
G304752 NA non-coding upstream 15707 1899180 ~ 1899478 (-)
G304459 NA other downstream 649466 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 784840 1086404 ~ 1097333 (-)
G304369 NA other downstream 822838 1058325 ~ 1058920 (-)
G304368 NA other downstream 826036 1055304 ~ 1055722 (-)
G305772 NA other upstream 841121 2724594 ~ 2724944 (-)
G306014 NA other upstream 1794401 3677874 ~ 3679488 (-)
G306679 NA other upstream 2612941 4496414 ~ 4505953 (-)
G306792 NA other upstream 2920922 4804395 ~ 4865973 (-)
G306902 NA other upstream 3270195 5153668 ~ 5154133 (-)

Expression


Co-expression Network