G305805


Basic Information

Item Value
gene id G305805
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 3357367 ~ 3359859 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU347480
GGACTGAATATATGAGCACATGCAGAGAGAATTGAGCACTGAACTCAACACTAATGTGAGATTGAGGAAAGAATCAATGCATAATGGAAGCTTCTGGACATTTGCATTTATTTCAGTTACCTTTCAAATTTTACAGACTAAATAAATCCAATTCAGATCTGTCTGGACATTTCTGGAGTAGTGAGTAGAAATGACTATAAATATATACATTTTTATAATAAATAATAATTAATTAGCAATATACATGTATAATAAAATTTTTCTAATACATTTATAATAATTACATTTAAATCATTAAGGGCCAGATTTACTATACAGGGCAAATTAGCGTGAGACAGCAGTCCCATAAAAGAGCAGAAGAGAGCGTAAAGTTCTGTGGGTGAATCTACTGAACATTTCCATAATGACCAACGCAATCTACCAAGAGCAGCGCCGATGATAAGGTGTGGGTAATCTACTAACAATACAGGAGCAGCAAATTAAAAATAACGTGGCTTGCCAAGCAACATGTTCGGATATCATTGCTTAGTAAATCACGTTGCATGATTTATTTAAATACTCTCCTCCCGTAAATTTTGCGTCTGAAAGGGAAACTCCTACAAAGGCATATGCAATAATGTCAGCCACAAAAGTAACTGTCCATGGCTTTTCATCGCTAATTTTTCACTGCGTGTCTTTAGTAAATCCTGACAGTATTTTTTTAACTCCAAGAGAGGGTTTGCGCTGGCGTAAGCTGTTAGTAAATCTGGCCCTAAATCACATAGATATACATCAGTTAAAAGTTTGAAAAACTCATCTGAATATGTTTCTTATGATCTTGCAAATGTAAAGGCCCAGGTTTTTCCAGCCCATCTTTACAGATTTGCATGATTTTCTTCATGTGAGATCATCTTATGATGTTTAGCAAATGTTCGCACTGCTCTTTTCCATACAATGACAATGAATGGGGATGGACCAAAAAAAAAAAAAAAAAAGCTGACCCAACAAAGGAATCCAATAGAATGGTACAGTGTTTCCTGTATGATTTTTATGTGCTTCTGTTAAAACAACAAAATGCTTCTTGTGTACAAAAAGTACCTGTACACAGCAAGAAAAGCTTTACGTGTGCTGGTAACTGTGCATTACCTTTACCTTACAAACCTTTTGAATACTTTCAGGGCATGGTGCCCGAGTTTTGTAATGATATGCCAATGCGTTTGTAAAATTGAGCATTTTATAACCAGTTTCAATATGGCCAATGCCCAAAATGGCCGATATGGGATAATTGGCTTGGCATGCTGCACCGAATCTAAAGAGATCAGTTATGATGATTTTTGCCCAAACCATTCAGAAGTTATAAGCAAAAAGAGCCATTTTTCATTTCTCCTGACCACTAGGTGACACTGTGCTGAAGCTGTGCAGGTAGCCTCAGGTCATGGTTGTCATAACACACCCAAGTTTGGTCAGAATTCGCCAAAGCGTTGCAGAGATATAGCCTCATATCCTTTTTGGAATGCTCTTCGTCAAATTCGTTTCTGTGTTATTCAAGTTTGACAAATCAACAAATCAACTCGATTTTTACATTTTTGTCAGCATGGTCTGAAGATGATCTGGTTCAATTTTCGTGAAAATTGGAGCAACGGCCTAGGAGGAGTTCGAAAAAGTAGTTTTTCTGGAAAATTCAAAATGGCGGAAAAATGTTCATGATAGAAATATATATGGTTAAAAAGTTATTAGCATCAATGTAAGTGAAACTTTGGACAGTTGGTGGCGCTTGAGTGATTGAGTTAGAGACTCCAAAATCACTGTGGTTAATGTTCAGACTGTCTTCTATCTGTGTGCCAAATTTCATAACTTTCCGACAAGTGGTTCTATAGGCTGCCATAGACTTCAAGAGCAGAAGAAGAAGAAGAATAGGAACACTAACAATTACAATGGGTGGCTACATGCCTTCGGTGCTTGGCCCCTAATGAAAATGAATGAAAAAACAACCAAGATAAAAATTAGGGGAAAAAATCCTTTTATCCTAAGTTAACCTTGATTTAGACTGAGATTTTTACTAAATACTGACCATTATTATATATATTTTATTCTAGGTATTCACATACCCTAAATTATTGAGTCTTACTCTCACACCAGCTTCACCTTCGTGATCGCACTGTCACAAACCCGCCATAACTTCACAGAAATTCCTTTTAGTCACGTACATACAACTTGCTAAATCAGATAATAATTGGCTTAATTATTTTAAGTGTGAAAAGCCCTATAATCTACTAGAAATAATAATTTCACAAGATTCCAGTCTAACAATTTATTTACCAGGTGTGGGACTGCACATGTAAATTAAAGAATTAGAAAACAAAAGATCAATCCATAATCAATTGCACAGAGCATAAAAATAAGTCAAAGAAGCATACCAGACAACAAAAACACAACACATGTGAAAGGATTAGTTTACTTTCAAATGAAAATTAGCCCAAGCTTTACTCACCCTCAACCCATCCTAGGTGTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU347480 True 2493 lncRNA 0.36 1 3357367 3359859

Neighbor

gene id symbol gene type direction distance location
CI01000092_03307794_03308422 NA coding downstream 48853 3307202 ~ 3308514 (-)
CI01000092_03271224_03274775 DSCAM coding downstream 82081 3271224 ~ 3275286 (-)
CI01000092_03224848_03225687 NA coding downstream 131572 3224461 ~ 3225795 (-)
CI01000092_03103762_03184280 DSCAMB, DSCAM coding downstream 173087 3103105 ~ 3184280 (-)
CI01000092_03086245_03088783 NA coding downstream 268249 3086208 ~ 3089118 (-)
CI01000092_03365550_03416277 ATM coding upstream 5148 3365007 ~ 3416277 (-)
CI01000092_03418301_03428309 ATM coding upstream 58442 3418301 ~ 3428309 (-)
CI01000092_03600064_03611514 MEIS3 coding upstream 240055 3599914 ~ 3612148 (-)
CI01000092_03614992_03615400 NA coding upstream 254578 3614437 ~ 3616983 (-)
CI01000092_03630767_03645397 PRSS16 coding upstream 270767 3630626 ~ 3646156 (-)
G305811 NA non-coding downstream 292 3356846 ~ 3357075 (-)
G305922 NA non-coding downstream 47068 3310093 ~ 3310299 (-)
G305817 NA non-coding downstream 82009 3226834 ~ 3275358 (-)
G305813 NA non-coding downstream 273721 3051910 ~ 3083646 (-)
G305818 NA non-coding upstream 3759 3363618 ~ 3364509 (-)
G305793 NA non-coding upstream 73412 3433271 ~ 3442950 (-)
G305816 NA non-coding upstream 87430 3447289 ~ 3449586 (-)
G305990 NA non-coding upstream 102555 3462414 ~ 3462976 (-)
G305809 NA non-coding upstream 110596 3470455 ~ 3528052 (-)
G305772 NA other downstream 632423 2724594 ~ 2724944 (-)
G304459 NA other downstream 2125075 1231900 ~ 1232292 (-)
CI01000092_01086701_01097333 CLRN1 other downstream 2260449 1086404 ~ 1097333 (-)
G304369 NA other downstream 2298447 1058325 ~ 1058920 (-)
G304368 NA other downstream 2301645 1055304 ~ 1055722 (-)
G306014 NA other upstream 318015 3677874 ~ 3679488 (-)
G306679 NA other upstream 1136555 4496414 ~ 4505953 (-)
G306792 NA other upstream 1444536 4804395 ~ 4865973 (-)
G306902 NA other upstream 1793809 5153668 ~ 5154133 (-)

Expression


Co-expression Network