G306413


Basic Information

Item Value
gene id G306413
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 4942529 ~ 4943000 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU348164
GAAACTTTTTCCTCGTCGAAGCAGAGACCAGGAGACTTTGGGATATCTTTCAAGCAGAAGTTACTCTTTATTGAGAAACGCGCTGTGCGTCGCTGTAGTCATCCAAGTCCAACTAAGGCAGGGTACATTGTAGTTTATATACATTCAAGGGGGAGGGATACATACAGTAGAGGTGGAGACAATCTAAACAAAGCATGCAAATGCAGTGCAGGAATCAGCCCATTACCGGCATTTCCCCAGCCCTGATCTAATCAGCATAACAGTGTCATTCAAATGCATAGGTGCTAATCCAATCAGTCTGACAGTATCGCCCATACCTTCACATTATCATAGAGACAAAGGCAGAGCTGTGTCTTGAGCTTGTCATGCCAAATGGTCAGGAAGTGCATAAAGACACCTGGGCTGCCTGACTTGATTTTCTTAGAAAGTCATCCTTTTTACCTTAAAATGCTAAATACAATGTACTTCACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU348164 True 472 lncRNA 0.43 1 4942529 4943000

Neighbor

gene id symbol gene type direction distance location
CI01000092_04939414_04942110 NA coding upstream 391 4938881 ~ 4942138 (+)
CI01000092_04904673_04935963 IFT80 coding upstream 6342 4904673 ~ 4936187 (+)
CI01000092_04869145_04870424 TRIM59 coding upstream 71936 4869145 ~ 4870593 (+)
CI01000092_04797021_04804488 KPNA4 coding upstream 137990 4797021 ~ 4804539 (+)
CI01000092_04748399_04769770 NA coding upstream 172122 4747852 ~ 4770407 (+)
CI01000092_04981384_04996796 NA coding downstream 38384 4981384 ~ 4997036 (+)
CI01000092_05020449_05021191 NA coding downstream 75705 5018705 ~ 5021820 (+)
CI01000092_05026383_05029730 NA coding downstream 83071 5026071 ~ 5031196 (+)
CI01000092_05248296_05250920 NA coding downstream 305012 5248012 ~ 5250995 (+)
CI01000092_05368233_05369612 NA coding downstream 425233 5368233 ~ 5369996 (+)
G306259 NA non-coding upstream 140615 4755240 ~ 4801914 (+)
G306376 NA non-coding upstream 213032 4729163 ~ 4729497 (+)
CI01000092_04716003_04716251 SPTSSB non-coding upstream 223881 4715819 ~ 4718648 (+)
G306372 NA non-coding upstream 230369 4711844 ~ 4712160 (+)
G306371 NA non-coding upstream 231945 4710126 ~ 4710584 (+)
G306417 NA non-coding downstream 7255 4950255 ~ 4950539 (+)
G306420 NA non-coding downstream 9490 4952490 ~ 4952720 (+)
G306422 NA non-coding downstream 12570 4955570 ~ 4955782 (+)
G306425 NA non-coding downstream 16054 4959054 ~ 4959305 (+)
G306284 NA non-coding downstream 58455 5001455 ~ 5017052 (+)
G305596 NA other upstream 1081196 3726347 ~ 3863135 (+)
G305584 NA other upstream 1274564 3667308 ~ 3667965 (+)
G304938 NA other upstream 2624295 2317792 ~ 2318234 (+)
G303768 NA other upstream 3626006 1315443 ~ 1316523 (+)

Expression


Co-expression Network