CI01000093_01385820_01391524


Basic Information

Item Value
gene id CI01000093_01385820_01391524
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000093
NCBI id null
chromosome length 1475560
location 1385426 ~ 1392044 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000093_01385820_01391524.mRNA
AGAGCTATTTAAAGCTCTGATAAAGCATCCAAACCGCTTTTTTTTTTCTAGGGCTCATGCATGGGTTCCTAGCTGGTCTTTCTCTTTCACCTGTCAAAACCTCCAGTTTTTCAATTCCCTGGTTAAAGCATTCAATAAATTCGGCATTCCTCTAGCAGAAGAAAAAATAAAAGGCCCATCTCCTGTCCTAGATTTCCTGGGGATCACACTAGATTCAGAAAAAATGCAAGCATTTCTTCCGCTAGACAAGCTAGTGTAACACCAGGCCAGCAGAGGGAGCCGTCACTGGAATACTGACCATGTTCCACTCCCTCTGCTTCCTCTTCAGTCACTTCCTGTTTGTTGGCTTTTTAACCAGAGACCATGCTGAGCCTCATTGCAAAGTATTGCCAGTTTACCTGCCTTACCAAGCATTATTTTCCCTGTTGATTCTGTCTGATTACCTGTGTATGATTTTGCCTGCTTCCTGTTTACCAATTACCTGGATTATCCCTTTTACTTTGGTTGCCCTATCGGACTGATGTTTTGGTTTAGACCCATTGCCTGCCTTCTCGCTATTGCTTCTTGGGCTAACCCTTTGTACGTTGACGGATTGGACTGCTCCTTTGGTTTTGATGCTCTGCCTGTTTTTCTGGATCTGTCTATTGATATTGTCTACAATAAACAACCACACATGGATTCTAACTTAGCCTCAGCGTCTACGTTACAGAATACTTCACCACCCATGAATCCAGCGGAAGTTTTAAACCTGCAGATGGCGTTCGCTTATCAGAGCGAGATGCTAAAGAATTATCAGGAACAGCTTGCTAAGTCCCAAACAGTCAACGAGCATCTGACGCACTACATCCGGTCACTTCCTCCTCCCAGCCGAAGACGAGCTATTGATTGGGCCTCAGCGGTCTGGGACTCTGACCCACGATTTAAATATTCTGCAGATTACTTCATCCAACAACTCCGGGAAGTGTTTGAATATCAGGCAGGGGGCAGAGATATCTCAACACAAATCATTAACATCAGTCAAGGCAACTGTACCGCCGCAGAATATGCTGTCGAGTTTCGAACACTAGCCTCTCAGAATGGGTGGAATGATGTCGCACTCAAAGCTATGTTTCACTGTAGTCTTTCCACCGAACTGCAGGCAGAACTAGCTTGTAAAGGAGAAGATTCATCCTTTCATGAGTTTGTCACCCTTGCCATTAAGATCGACAACCTTATGAGACAATCTGATACTCTGTCTCTTGATCTAACAGTGATGATCAATTCTGGGGCTGCTCTTAATCTGATCAACAAGGACATCATCACCAAGTATAACATCTCCACTCAACCATCATTGAAAGTCCTGACACTCAGAAATGTGAGCATTCCCACCTACTACAACGACCTGTCAGAAGTCTTTATTAAAACCAAGGCCACACAACTGCTACCACATCGATCCTGGGATTGTGCTATCAATCTGCTTCCCAATACCATGCCCCCCAAAAGCAAGGTTTATCCCCTCTCCAGAGTCGAAAGTCAAGCTATGGAGGAATATATTGAAGAAGCTCTGGACTCAGGTTTCATTCGACTATTCATTCGGACTACAGCTGATGCGGAGCGTCAGTGTGGGGCAGAAATGACGAACATGACCATGACCCAGCGGTTTTCCTTGTATGGTGTGGATGCGGAAGTCCTGTTGGCATCGCTTGCGACGTACATTTAGTTTCTGGAGAATCTGGTTGCTGATGAAGTTCCCTGCAGAGCCAGAGTCAATGAGGGCTTGCGCTGAAACACAGACATGAGAGTTAAGAAGATGTACAGGAGCTGGTAGCTGGATAGTACTCACCGCTGGGCGTGGTGGTCATACAGGACAGGCAGCGATCATATGGTCTTCTCCCCCACAGTATAAGCAGAGATGATGTTGTTGTTATATATTTCCTTTATATTTAAGAAATACACGAGAGGCAGGAGCGAGCGTAAAACAGGTGCGTGCCGTTTTTATTCCTGCATAACACTATATGACTCTATGTATACGGAAACACAGAAAGGTCAATTCGCATGTCATAAATACACAACATATTCCTCCCCTCTAAATTCAAAGTAGTAAAGAAAATAAA

Function

NR:

description
gag polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000093_01385820_01391524.mRNA True 2093 mRNA 0.45 5 1385426 1392044

Neighbor

gene id symbol gene type direction distance location
CI01000093_01378476_01380460 NA coding downstream 4189 1378157 ~ 1381237 (-)
CI01000093_01371580_01372551 NA coding downstream 12749 1371099 ~ 1372677 (-)
CI01000093_01346926_01348902 OR111-5 coding downstream 36372 1346591 ~ 1349054 (-)
CI01000093_01310006_01310983 NA coding downstream 74301 1309351 ~ 1311125 (-)
CI01000093_01306774_01307715 NA coding downstream 76999 1305548 ~ 1308427 (-)
CI01000093_01406829_01407782 NA coding upstream 14690 1406734 ~ 1407851 (-)
CI01000093_01421955_01422896 OR118-3, OR118-2, OR118-1 coding upstream 29890 1421934 ~ 1423339 (-)
G307879 NA non-coding downstream 924 1384214 ~ 1384502 (-)
G307876 NA non-coding downstream 2639 1382373 ~ 1382787 (-)
G307860 NA non-coding downstream 15867 1369317 ~ 1369559 (-)
G307823 NA non-coding downstream 57458 1327760 ~ 1327968 (-)
G307820 NA non-coding downstream 58489 1326589 ~ 1326937 (-)
G307916 NA non-coding upstream 5334 1397378 ~ 1417836 (-)
CI01000093_01042275_01068202 NA other downstream 311673 1041650 ~ 1068202 (-)

Expression


Co-expression Network