Gene
RNA
| Item | Value |
|---|---|
| gene id | G328611 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000112 |
| NCBI id | null |
| chromosome length | 5247617 |
| location | 1466032 ~ 1466309 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: transcription factor HIVEP2 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU373495 | True | 278 | lncRNA | 0.35 | 1 | 1466032 | 1466309 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000112_01304699_01321467 | NA | coding | upstream | 144324 | 1304303 ~ 1321708 (+) |
| CI01000112_00975908_00994568 | RHOT1B, RHOT1, RHOT1A | coding | upstream | 469967 | 975908 ~ 996065 (+) |
| CI01000112_00967726_00973214 | NA | coding | upstream | 492553 | 967726 ~ 973479 (+) |
| CI01000112_00943876_00960636 | NA | coding | upstream | 505396 | 943876 ~ 960636 (+) |
| CI01000112_00931318_00942127 | SUZ12B, SUZ12 | coding | upstream | 523647 | 931147 ~ 942385 (+) |
| CI01000112_01473681_01484126 | NA | coding | downstream | 7048 | 1473357 ~ 1484634 (+) |
| CI01000112_01493953_01497856 | NA | coding | downstream | 27644 | 1493953 ~ 1498684 (+) |
| CI01000112_01534218_01550547 | MGAT5B | coding | downstream | 67909 | 1534218 ~ 1550876 (+) |
| CI01000112_01711753_01717045 | NA | coding | downstream | 244923 | 1711232 ~ 1717114 (+) |
| CI01000112_01753138_01753764 | NA | coding | downstream | 286647 | 1752956 ~ 1754407 (+) |
| G328609 | NA | non-coding | upstream | 4423 | 1461402 ~ 1461609 (+) |
| G328608 | NA | non-coding | upstream | 4821 | 1460925 ~ 1461211 (+) |
| G328601 | NA | non-coding | upstream | 22618 | 1443081 ~ 1443414 (+) |
| G328600 | NA | non-coding | upstream | 32160 | 1433393 ~ 1433872 (+) |
| G328599 | NA | non-coding | upstream | 32992 | 1432523 ~ 1433040 (+) |
| G328612 | NA | non-coding | downstream | 388 | 1466697 ~ 1466920 (+) |
| G328588 | NA | non-coding | downstream | 88302 | 1554611 ~ 1555332 (+) |
| G328794 | NA | non-coding | downstream | 211836 | 1678145 ~ 1678925 (+) |
| G328876 | NA | non-coding | downstream | 286091 | 1752400 ~ 1752626 (+) |
| G328878 | NA | non-coding | downstream | 288643 | 1754952 ~ 1755283 (+) |
| G328456 | NA | other | upstream | 232914 | 1232022 ~ 1233118 (+) |
| G329125 | NA | other | downstream | 1151395 | 2617704 ~ 2618151 (+) |
| G329194 | NA | other | downstream | 1453945 | 2920254 ~ 2931889 (+) |
| CI01000112_05076817_05101845 | NA | other | downstream | 3618411 | 5076817 ~ 5101845 (+) |
