G329079


Basic Information

Item Value
gene id G329079
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 2410495 ~ 2410720 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU374043
AGAGTATCAGTGAAAAACGGCTTATAATTCAGTCCGTTTCTCACACAAAACTGCGGCTTCTGAAAACTCTGAAACATTATTTTTCAGTGGCAGCAAAGGCAATTTTCATGGCATCAAAGCAGATTCAAATAAAAGTAAATAAAAATGAACTAAATTAAGACTTGAAAGATGATACAAGCATAAATAATGTCTTACTCAACAGATAGCGCTTTAACAAAGCCTTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU374043 True 226 lncRNA 0.33 1 2410495 2410720

Neighbor

gene id symbol gene type direction distance location
CI01000112_02295987_02301298 NA coding upstream 107902 2295899 ~ 2302593 (+)
CI01000112_02275641_02277644 NA coding upstream 131884 2275641 ~ 2278611 (+)
CI01000112_02261335_02262540 NH2L1, SNU13.S, BRAFLDRAFT_68109, SNU13.L, SNU13B, SNU13, SNU13A coding upstream 147714 2261335 ~ 2262781 (+)
CI01000112_02240184_02240792 C16ORF52 coding upstream 169252 2237669 ~ 2241243 (+)
CI01000112_02207728_02210655 NA coding upstream 199538 2207690 ~ 2210957 (+)
CI01000112_02454665_02459341 NA coding downstream 43910 2454630 ~ 2459341 (+)
CI01000112_02466191_02472040 CANT1A, CANT1 coding downstream 55471 2466191 ~ 2472567 (+)
CI01000112_02483013_02484955 LGALS3BPA coding downstream 72293 2483013 ~ 2485133 (+)
CI01000112_02503439_02516455 LGALS3BPA, LGALS3BPB coding downstream 92152 2502872 ~ 2516636 (+)
CI01000112_02532994_02538052 NA coding downstream 119304 2530024 ~ 2538125 (+)
G329025 NA non-coding upstream 127585 2282689 ~ 2282910 (+)
G329015 NA non-coding upstream 127870 2250076 ~ 2282625 (+)
G328925 NA non-coding upstream 162087 2243368 ~ 2248408 (+)
G328926 NA non-coding upstream 167311 2241872 ~ 2243184 (+)
G328989 NA non-coding upstream 227053 2182904 ~ 2183442 (+)
G329080 NA non-coding downstream 1691 2412411 ~ 2412713 (+)
G329067 NA non-coding downstream 13122 2423842 ~ 2425198 (+)
G329098 NA non-coding downstream 130947 2541667 ~ 2542297 (+)
G329097 NA non-coding downstream 239654 2650374 ~ 2653361 (+)
G329145 NA non-coding downstream 361781 2772501 ~ 2772741 (+)
G328456 NA other upstream 1177377 1232022 ~ 1233118 (+)
G329125 NA other downstream 206984 2617704 ~ 2618151 (+)
G329194 NA other downstream 509534 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 2674000 5076817 ~ 5101845 (+)

Expression


Co-expression Network