Gene
RNA
| Item | Value |
|---|---|
| gene id | G329339 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000112 |
| NCBI id | null |
| chromosome length | 5247617 |
| location | 3306588 ~ 3306879 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU374359 | True | 292 | lncRNA | 0.36 | 1 | 3306588 | 3306879 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000112_03285278_03286531 | STK19 | coding | upstream | 20020 | 3284558 ~ 3286568 (+) |
| CI01000112_03234159_03240113 | MHC1ZDA, MHC1ZBA | coding | upstream | 66475 | 3233045 ~ 3240113 (+) |
| CI01000112_03192658_03204707 | MHC1ZBA | coding | upstream | 101556 | 3191661 ~ 3205032 (+) |
| CI01000112_03112349_03117520 | NA | coding | upstream | 189001 | 3112349 ~ 3117587 (+) |
| CI01000112_03100235_03105799 | USH1G, USH1GA | coding | upstream | 200315 | 3099448 ~ 3106273 (+) |
| CI01000112_03344466_03359943 | CYTH3, CYTH3A | coding | downstream | 37587 | 3344466 ~ 3360296 (+) |
| CI01000112_03571702_03574425 | NA | coding | downstream | 264501 | 3571380 ~ 3574700 (+) |
| CI01000112_03608324_03621681 | NA | coding | downstream | 301445 | 3608324 ~ 3621688 (+) |
| CI01000112_03653384_03730444 | NA | coding | downstream | 346505 | 3653384 ~ 3730448 (+) |
| CI01000112_03759872_03772553 | AXIN2 | coding | downstream | 452924 | 3759803 ~ 3772982 (+) |
| G329296 | NA | non-coding | upstream | 1193 | 3302179 ~ 3305395 (+) |
| G329334 | NA | non-coding | upstream | 4492 | 3301668 ~ 3302096 (+) |
| G329340 | NA | non-coding | upstream | 30702 | 3275564 ~ 3275886 (+) |
| G329354 | NA | non-coding | upstream | 87915 | 3218414 ~ 3218673 (+) |
| G329307 | NA | non-coding | upstream | 94757 | 3210141 ~ 3211831 (+) |
| G329373 | NA | non-coding | downstream | 69402 | 3376281 ~ 3384378 (+) |
| G329380 | NA | non-coding | downstream | 80278 | 3387157 ~ 3387370 (+) |
| G329381 | NA | non-coding | downstream | 81371 | 3388250 ~ 3388451 (+) |
| G329413 | NA | non-coding | downstream | 226350 | 3533229 ~ 3543026 (+) |
| G329517 | NA | non-coding | downstream | 504655 | 3811534 ~ 3882944 (+) |
| G329194 | NA | other | upstream | 374699 | 2920254 ~ 2931889 (+) |
| G329125 | NA | other | upstream | 688437 | 2617704 ~ 2618151 (+) |
| G328456 | NA | other | upstream | 2073470 | 1232022 ~ 1233118 (+) |
| CI01000112_05076817_05101845 | NA | other | downstream | 1777841 | 5076817 ~ 5101845 (+) |
