CI01000113_00283931_00284691


Basic Information

Item Value
gene id CI01000113_00283931_00284691
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 283862 ~ 284723 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_00283931_00284691.mRNA
TCCTCTAATACCGAATTGGAAAGGATCGAGAAATGAGTCTGACAGCTAAGGATAAAGCCTTGGTCAAGGCCTTCTGGGGTAAAATCTCTAGTAAGGCCGATGCCATAGGCCAAGAAGCTCTGGTAAGAATGCTCATTGTCTACCCTCAGACTAAAATATATTTTCCTGGTTGGACTGATCATTCTCTCGACTCTCCCCAAGTGAAGAAACACGGCAAAACTGTGATGACAGCCATCACTGATGCTGTGGGCAAAATGGATGATCTTATTGGTGGAATGAGCGCCTTGAGTGAAATCCATGCCACTAAGTTGCGCATTGACCCTGTAAACTTCAAGATTCTGTCCCATAACATCCTCGTGACTCTTGCAGTTCATTTCCCCGCTGACTTCACCGCAGAAGTGCACGTGTCCGTGGACAAGTTTCTCGCGGCTCTGTCTGCTGCCCTCGCTGATAAATACAGATAAAATCATCATTCAGGGGCTTCTCGTTTATCTGCAAACAGAGCTACTTGAAATAATGAAAAGTAAAATAAA

Function

GO:

id name namespace
GO:0005344 oxygen carrier activity molecular_function

KEGG:

id description
K13826 HBZ; hemoglobin subunit zeta

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_00283931_00284691.mRNA True 533 mRNA 0.45 3 283862 284723

Neighbor

gene id symbol gene type direction distance location
CI01000113_00268929_00271262 NA coding downstream 12568 268848 ~ 271294 (-)
CI01000113_00254945_00255661 HBAA1 coding downstream 28153 254858 ~ 255709 (-)
CI01000113_00122344_00130639 ELAVL3 coding downstream 153155 121854 ~ 130707 (-)
CI01000113_00077172_00080517 NA coding downstream 203345 75223 ~ 80517 (-)
CI01000113_00301490_00302258 NA coding upstream 16685 301408 ~ 302281 (-)
CI01000113_00308045_00308457 HBBE2, HBBE1.1 coding upstream 23181 307904 ~ 308514 (-)
CI01000113_00324040_00324756 HBAA1 coding upstream 39228 323951 ~ 324804 (-)
CI01000113_00332256_00333023 NA coding upstream 47448 332171 ~ 333055 (-)
CI01000113_00355640_00360687 MPG coding upstream 70553 355276 ~ 360820 (-)
G332283 NA non-coding downstream 44809 237050 ~ 239053 (-)
G332264 NA non-coding downstream 73004 209581 ~ 210858 (-)
G332231 NA non-coding downstream 200019 83542 ~ 83843 (-)
G332230 NA non-coding downstream 200401 82937 ~ 83461 (-)
G332229 NA non-coding downstream 201746 81900 ~ 82116 (-)
G332312 NA non-coding upstream 89294 374017 ~ 374294 (-)
G332313 NA non-coding upstream 89763 374486 ~ 374692 (-)
G332344 NA non-coding upstream 163227 447950 ~ 448335 (-)
G332346 NA non-coding upstream 167425 452148 ~ 452348 (-)
G332347 NA non-coding upstream 168032 452755 ~ 453096 (-)
G332210 NA other downstream 234377 47990 ~ 49485 (-)
G332160 NA other upstream 105504 390227 ~ 446837 (-)
G332649 NA other upstream 1862491 2147214 ~ 2148558 (-)
G332837 NA other upstream 1966122 2250845 ~ 2251213 (-)
CI01000113_02356565_02370009 NA other upstream 2082893 2356565 ~ 2370009 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025780 hbaa2 coding NC_007114.7 CM002887.2 55093581 ~ 55094399 (+)