XLOC_011598 (tmem62)


Basic Information

Item Value
gene id XLOC_011598
gene name tmem62
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 37253706 ~ 37281313 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023081
GGATGATGTTGGCGATTACAGCGCGCTGATTTGCTCGTCCATTGCGGCTCCGCTGGCGCTCAGTGAACCGGCTGCGCGGGGATGTCCGGCCGTGTGAGTGCTCCTCCGGCATGAAGCAGGGCTCTCCGTGACTCCTCCAGGATGCTCCGGCTGTTCGCGGCTCTGGTGGTCCTCGGGCTGCTGCTCGCCTGCTTCACTTCCTGGCTCTTCGACAGCTATGACGGCGCCTGGCACCCGAAACGCAGCTTATTCCCCCAGTCCGGGCGCAGCGGCGGCCCTCCGCACCCCGGCGGACAGCGGGACAACATCTTTTGGTTCGTGCAGGTGTCCGACATCCATATCAGCCGTTTCCACGATCCGAGGCGCATCCCAGACTTCGAGAAGTTCTGCACTGACACTATTGACGTCATTAAACCTGATCTTGTGCTGGCCACAGGGGACTTGACAGATGCAAAGACTGAGAGTAAAATGGGCTCTCTTCAACATGAAGTGGAGTGGCAGGCCTACCACAACGTCCTGAAAAGATCTCGAGTGCTGGAACGCACAAAATGGATTGACATTCGTGGAAACCATGATGCCTTTAATATCGTTTCTCTGGAGAGCGTGAACAATTATTACAGGAAATACTCTGCCAATCAGAAAGTAGGATCCTTCCACTACGTACACAGAACTCCCTTCGGGAACTATTCGTTCATTTGTGCTGATGCCACTCTGGTCCCGGGACCAAAACGGCCTTATAACTTCTTTGGGATTATCGATGAGTCTCAGATGGACATGTTGGAGACCTTCAGAGAGGAGAGCCTGAGCAGTAACAAGTCCATCTGGTTTGGACATTATACCACATCCACTGTCATCTCCCCCTCCCCAGGAATCCGAGAGCTCATGAGtacagCTGTGGCATATTTGTGTGGGCACCTACACACACTGGGAGGCTTCATGCCGGCTCTGCACAGTCGCCATCAAGGTGGCACCCTGGAATTAGAGCTGGGAGACTGGATGGACAATCGCAGGTACAGGATTTTGGCTTTCGACCATGACCTGTTTAGCTTCTCCGACTTGACGTTTGAGGACTGGCCCGCCATGCTGATCACCAACCCTAAAGACGCACAGTACCTGCAACCAGGAGTGGAGCCTCTGGGTCGAATCCGCAGTTCCACTCACATCagGGTCCTTGCTTTCTCTGAATCCCCCATCACAGCCGTGTACGTGAGCGTGGACGGAGTTACACTGGGAAAAGCAGTCAGCGCTGGAGGTCCTCTATATGTGCTGCTCTGGGATCCAATGCACTACGCTACAGGACTGCACACTATCAAAGTCAAAGTGGAGGACTCTGCAGGCCGCTCAAAAGTGCGTGAGCAGCAGTTCACGCTGGAGGAAGAGCTCACTCCCAGCTTCGGCTTCGTGCAGTCCTTTATCCTCCTCACAGACCACTACATACTGGCACGGATCGCTTTCGTAGTAATAGTTTTACTAAACCTTGGTGGGCTTGTACTCTTCAGATTTATGCCAGTCTCTTCAACAAGAGGACTGTCCTCTCAAGCCTGGATGTCCCTGCATCTGGTCAGCAAGAGCAACGTGTTCTTCTACACTCTGCTGCTGTTCAATCTGTGTACAGCATTAGGTCCGTGGTTCATTGGGGAGGTCATTGATGGACACATTGGCGTCTGCTTTGCTTTCGGTGTGTTTGTGGATGGGCATTTCCTTGAAGGCAGCCTGACGTATGTTGTGGGATTCATTCAGGTGCTGTTCTTCAATATGCCCCTCACCTATTACCTCTGCTGGAGTCTCCACCACAGGTGTCGCGGCACCAACTTCCGCTCTCATTTCTGCCGGCCGGGCTGCCGATGGAGGACTCTGGCAGTACACCTCGGCATGCTGGTCCTCATGATCTGGCAGGCCTATTCATGCTACTTCCTGCTGGAGACCTACGGGTCGCTGGCCTTCTTCATGTCACCTGTACGCACCTGGGCCCTCCTCATGGGCCTGCTGCTGGTGTACAGGGCATGGTGGGGGAAACCCCTGCGCTTCTCCGATGGCAGCAAAACCAACCGGCCGTTGTGACGGTGACCGATTCACCTCGTCTGTATCGTTGTGCCGGGCGTTGTTTTGTGCCAAACTCTTCCCTCCTTTCGACAGATTTCCATTAGAGATATCGAAAATAGTACTTCGTTGTATTGGAGCGATGATGACATCACTAGCGGATGACGGAGCTGTCTGAAAGTTCACTAATACACGTCGGTAGGTTGCCAGTTTCCACCGTTGTGAACCCGAGCAGTTGTGTGAGGTTTATTCCGTTGATAAACTGAGCATTGCGTA
>TCONS_00023082
TGCGGCTCCGCTGGCGCTCAGTGAACCGGCTGCGCGGGGATGTCCGGCCGTGTGAGTGCTCCTCCGGCATGAAGCAGGGCTCTCCGTGACTCCTCCAGGATGCTCCGGCTGTTCGCGGCTCTGGTGGTCCTCGGGCTGCTGCTCGCCTGCTTCACTTCCTGGCTCTTCGACAGCTATGACGGCGCCTGGCACCCGAAACGCAGCTTATTCCCCCAGTCCGGGCGCAGCGGCGGCCCTCCGCACCCCGGCGGACAGCGGGACAACATCTTTTGGTTCGTGCAGGTGTCCGACATCCATATCAGCCGTTTCCACGATCCGAGGCGCATCCCAGACTTCGAGAAGTTCTGCACTGACACTATTGACGTCATTAAACCTGATCTTGTGCTGGCCACAGGGGACTTGACAGATGCAAAGACTGAGAGTAAAATGGGCTCTCTTCAACATGAAGTGGAGTGGCAGGCCTACCACAACGTCCTGAAAAGATCTCGAGTGCTGGAACGCACAAAATGGATTGACATTCGTGGAAACCATGATGCCTTTAATATCGTTTCTCTGGAGAGCGTGAACAATTATTACAGGAAATACTCTGCCAATCAGAAAGTAGGATCCTTCCACTACGTACACAGAACTCCCTTCGGGAACTATTCGTTCATTTGTGCTGATGCCACTCTGGTCCCGGGACCAAAACGGCCTTATAACTTCTTTGGGATTATCGATGAGTCTCAGATGGACATGTTGGAGACCTTCAGAGAGGAGAGCCTGAGCAGTAACAAGTCCATCTGGTTTGGACATTATACCACATCCACTGTCATCTCCCCCTCCCCAGGAATCCGAGAGCTCATGAGtacagCTGTGGCATATTTGTGTGGGCACCTACACACACTGGGAGGCTTCATGCCGGCTCTGCACAGTCGCCATCAAGGTGGCACCCTGGAATTAGAGCTGGGAGACTGGATGGACAATCGCAGGTACAGGATTTTGGCTTTCGACCATGACCTGTTTAGCTTCTCCGACTTGACGTTTGAGGACTGGCCCGCCATGCTGATCACCAACCCTAAAGACGCACAGTACCTGCAACCAGGAGTGGAGCCTCTGGGTCGAATCCGCAGTTCCACTCACATCaggtgtctctGGTCCTTGCTTTCTCTGAATCCCCCATCACAGCCGTGTACGTGAGCGTGGACGGAGTTACACTGGGAAAAGCAGTCAGCGCTGGAGGTCCTCTATATGTGCTGCTCTGGGATCCAATGCACTACGCTACAGGACTGCACACTATCAAAGTCAAAGTGGAGGACTCTGCAGGCCGCTCAAAAGTGCGTGAGCAGCAGTTCACGCTGGAGGAAGAGCTCACTCCCAGCTTCGGCTTCGTGCAGTCCTTTATCCTCCTCACAGACCACTACATACTGGCACGGATCGCTTTCGTAGTAATAGTTTTACTAAACCTTGGTGGGCTTGTACTCTTCAGATTTATGCCAGTCTCTTCAACAAGAGGACTGTCCTCTCAAGCCTGGATGTCCCTGCATCTGGTCAGCAAGAGCAACGTGTTCTTCTACACTCTGCTGCTGTTCAATCTGTGTACAGCATTAGGTCCGTGGTTCATTGGGGAGGTCATTGATGGACACATTGGCGTCTGCTTTGCTTTCGGTGTGTTTGTGGATGGGCATTTCCTTGAAGGCAGCCTGACGTATGTTGTGGGATTCATTCAGGTGCTGTTCTTCAATATGCCCCTCACCTATTACCTCTGCTGGAGTCTCCACCACAGGTGTCGCGGCACCAACTTCCGCTCTCATTTCTGCCGGCCGGGCTGCCGATGGAGGACTCTGGCAGTACACCTCGGCATGCTGGTCCTCATGATCTGGCAGGCCTATTCATGCTACTTCCTGCTGGAGACCTACGGGTCGCTGGCCTTCTTCATGTCACCTGTACGCACCTGGGCCCTCCTCATGGGCCTGCTGCTGGTGTACAGGGCATGGTGGGGGAAACCCCTGCGCTTCTCCGATGGCAGCAAAACCAACCGGCCGTTGTGACGGTGACCGATTCACCTCGTCTGTATCGTTGTGCCGGGCGTTGTTTTGTGCCAAACTCTTCCCTCCTTTCGACAGATTTCCATTAGAGATATCGAAAATAGTACTTCGTTGTATTGGAGCGATGATGACATCACTAGCGGATGACGGAGCTGTCTGAAAGTTCACTAATACACGTCGGTAGGTTGCCAGTTTCCACCGTTGTGAACCCGAGCAGTTGTGTGAGGTTTATTCCGTTGATAAACTGAGCATTGCGTA

Function

symbol description
tmem62 Predicted to enable hydrolase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to human TMEM62 (transmembrane protein 62).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1837 Predicted to enable hydrolase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to human TMEM62 (transmembrane protein 62).

Ensembl:

ensembl_id ENSDARG00000053890

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023081 False 2316 mRNA 0.54 14 37253706 37281313
TCONS_00023082 True 2282 nonsense_mediated_decay 0.54 14 37253748 37281313

Neighbor

gene id symbol gene type direction distance location
XLOC_011596 hadhab coding upstream 896 37227936 ~ 37252810 (+)
XLOC_011595 slc30a1b coding upstream 32662 37215820 ~ 37221044 (+)
XLOC_011594 impg1b coding upstream 571966 36627099 ~ 36681740 (+)
XLOC_011593 CR354585.2 coding upstream 639274 36614315 ~ 36614432 (+)
XLOC_011592 htr1b coding upstream 664101 36588281 ~ 36589605 (+)
XLOC_011600 elmsan1b coding downstream 20547 37301860 ~ 37365668 (+)
XLOC_011601 NA coding downstream 99187 37380500 ~ 37398410 (+)
XLOC_011602 AL929543.1 coding downstream 172363 37453676 ~ 37453807 (+)
XLOC_011603 mta1 coding downstream 229495 37510808 ~ 37618891 (+)
XLOC_011604 tmem229b coding downstream 343391 37624704 ~ 37649828 (+)
XLOC_011591 AL929378.1 non-coding upstream 1338580 35915010 ~ 35915126 (+)
XLOC_011590 NA non-coding upstream 1696144 35556312 ~ 35557562 (+)
XLOC_011587 CR556709.1 non-coding upstream 1964965 35278788 ~ 35288741 (+)
XLOC_011583 NA non-coding upstream 2578270 34634098 ~ 34675436 (+)
XLOC_011605 NA non-coding downstream 384338 37665651 ~ 37668524 (+)
XLOC_011606 NA non-coding downstream 619118 37900431 ~ 37922022 (+)
XLOC_011609 NA non-coding downstream 966735 38248048 ~ 38253066 (+)

Expression


Co-expression Network