| Item | Value |
|---|---|
| gene id | CI01000154_00709450_00737541 |
| gene name | SACS |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000154 |
| NCBI id | null |
| chromosome length | 1600967 |
| location | 708287 ~ 738244 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| sacs | Predicted to enable Hsp70 protein binding activity and chaperone binding activity. Human ortholog(s) of this gene implicated in Charlevoix-Saguenay spastic ataxia. Orthologous to human SACS (sacsin molecular chaperone). |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|---|
| K17592 | SACS; sacsin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000154_00709450_00737541.mRNA | True | 15603 | mRNA | 0.43 | 9 | 708287 | 738244 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000154_00641532_00674274 | GAB2 | coding | upstream | 34013 | 641532 ~ 674274 (+) |
| CI01000154_00583484_00594396 | NARS2 | coding | upstream | 113856 | 583484 ~ 594431 (+) |
| CI01000154_00418700_00562133 | TENM4 | coding | upstream | 146154 | 418700 ~ 562133 (+) |
| CI01000154_00378861_00412679 | NA | coding | upstream | 295342 | 378861 ~ 413291 (+) |
| CI01000154_00170851_00224901 | NA | coding | upstream | 483218 | 169835 ~ 225069 (+) |
| CI01000154_00753231_00755134 | TRAPPC4.S, TRAPPC4 | coding | downstream | 12906 | 751150 ~ 755134 (+) |
| CI01000154_00776484_00783606 | CALML6, CALM2, CALM3, CALM1 | coding | downstream | 38240 | 776484 ~ 783682 (+) |
| CI01000154_00887422_00890641 | NA | coding | downstream | 149178 | 887422 ~ 890943 (+) |
| CI01000154_00902311_00907798 | RHOUB | coding | downstream | 163810 | 902054 ~ 907995 (+) |
| CI01000154_00956115_00973357 | RAB4B, MIA-RAB4B, RAB4A | coding | downstream | 216786 | 955030 ~ 973682 (+) |
| G361584 | NA | non-coding | upstream | 671 | 706992 ~ 707616 (+) |
| G361580 | NA | non-coding | upstream | 21029 | 687049 ~ 687258 (+) |
| G361578 | NA | non-coding | upstream | 23952 | 684094 ~ 684335 (+) |
| G361569 | NA | non-coding | upstream | 125679 | 581978 ~ 582608 (+) |
| G361598 | NA | non-coding | downstream | 4842 | 743086 ~ 783353 (+) |
| G361605 | NA | non-coding | downstream | 55885 | 794129 ~ 797777 (+) |
| G361627 | NA | non-coding | downstream | 95859 | 834103 ~ 834363 (+) |
| G361628 | NA | non-coding | downstream | 98101 | 836345 ~ 836602 (+) |
| G361631 | NA | non-coding | downstream | 108474 | 846718 ~ 847242 (+) |
| CI01000154_01258168_01258920 | RAB34 | other | downstream | 519127 | 1257371 ~ 1258920 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|