CI01000154_01057020_01083988 (ARHGAP35)


Basic Information

Item Value
gene id CI01000154_01057020_01083988
gene name ARHGAP35
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 1056784 ~ 1086056 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000154_01057020_01083988.mRNA
CTTTTTAAACCTCTGCCAAAATCGTGAACGGCCAGATGACTGTGGATTTATAGTTTGATCATTAAGGGGATTGAACAGACATACCCTACATGGAAAAAAAACCCTAAAGCAACTTTCAGGATCATTAGAAATAAATTATTTGCCAGGCCTGAAAGCATTTGGATGGAACCTCAGCCCAGCAGCTTTCAAACTAGAGCTTCTGGGAATGGCAAGATGAGCGCAGTCATACGGTGATGATGGCAAAAAAACAAGATGCCCGGGCACTAACCTACAACCTTGTTGTGGTAGGTTTGTCCGGGACTGAAAAGGAGAAGGGGCAATGTGGGGTAGGCAAGTCCTGCCTTTGTAATCGCTTTGTTCGCCCCAGTGCTGATGACTTTTATTTGGACCACACATCTGTTTTAAGCACAAGTGACTTTGGTGGTAGAGTGGTAAACAATGACCACTTCCTGTTTTGGGGCGAGGCGGTACGAATGTTGGAGGAGGGTGCTGAGTGTCGAATGCATGTGGTGGAACAGACAGAGTTTATTGATGACCAAACGTTCCAGCCACATCGAAGCACTGCCTTACAGCCCTATATCAAGCGGGCAGCTTCCCCCAAACTGGCCTCTGCTGAGAAGCTTATGTATTTCTGCACAGATCAACTAGGACTAGAGCAAGACTTTGAGCAGAAGCAAATGCCTGAAGGCAAGCTTTTGGTGGATGGATTCTTACTCTGTGTAGATGTAAGCAGGGGTATGAACCGAAACTTTGATGACCAGATGAAGTTCGTCAGCAATCTATATAACCAGCTAGGTAAGACCAAGAAGCCAGTTGTACTTGTGTTGACCAAGTGTGATGAAGGGGTTGAGCGGTACATTAAAGACTCTCACACCTTTGCCTTGACCAAGAAGAATTTGCAGGTTGTTGAGACCTCAGCACGCTCTAACGTTAATGTTGACCTTGCCTTCCTTACCTTGGTGCAGTTGATAGATAAAAGTAGAGGGAAGCCCAAGATCATTCCTTACTTTGAAGCCCTCAAGCAGCAGAGTCAGCAGATAGCATCCGCTAAGGACCGCTATGAGTGGCTGGTTAGCCGAATTGTGAAGAACCATAATGAAACATGGCCCAACACCAACCGTAGAATGCAGACATCACCTGAATACAAAGAGTATGTCTTCCTTGAGGGTACTTCCAAGGCCAAGAAACTATTCCAGCAACATGTACACAGACTCAAGCAAGAGCACATAGAAAAGCGGCGTAAAATTTATCTTAGCACTCTCCCACAGGCTCTCAACTCATTGGTTCCAGACCTGGATGAGATTGATCACCTGAGCTGGTCAGGAGTACAGAAAGTTCTCGAGACTAAGCGGGAGTTCTCCCACTGGTTTGTCATATTGGATGACACACCATGGGAAACTACACCACACATTGACAACATGGAGGATGAACGCATTCCCCAGGACCTTTTGGAAACCCCTGTAGCAGAGGCAATCTATGAGAGTCACTTAGAACACCTGCGCAATGAGCGAAAGAGGGCAGAAATGCGTTGTGAGTTCAAAGAGAAACTTGCATCTTCACCATTTGTTACACCTGGCAAACCTTGGGAGGAAGCTCGTAGCTTCATCATGAATGAGGAATTTTATCAGTGGCTGGAGGAGCCAGAGTACCTTGATATCTATAACAAATACCAGAAGATTATTATTGACCAAGCCAAAGAGGACTTCCAAGAACTTTTACTGGAGTACTCTGAGTTGTTCTATGAGCTTGAAGTTGATGCTAAGCCCAGTAAAGAAAAAATGGGTGCCATCCAAGAGGTTCTTGGAGAGGAGCAGAGGTTCAAGGCCCTCCAAAAGCTTCAGGCTGAGAGAGATGCCCTTGTGCTCAAACATATCCATTTTGTATACCACCCTACTAAGGAAACCTGCCCTAGTAGTCCATATTGTGTGGATGGCAAAATTGAGCAACAGTTAGCCCTTCGTTTTCCCACTCGATATTCCTTTGATGGGAGCTCAAAATCACAGTTTGGTGAGGGAAAGGTAGATAGAATTAATCTTGTAATTCTTGGCAAAGATGGACTTGCAAGAGAGTTAGCTAATGAGATCAGAGCACTGTGCACCAATGATGAACGGTTTGTGCTAGATGGAAGGACTTATGAACTGGCTCTTCGACCTATAGAAGGAAATGTACGCCTTCCAGTAAACTCCTTCCATACCCCCACTTTCACACCACATGGTTGCATCTGCCTCTACAACTCAAAGGAATCCTTATCCTATGTCGTTGACAGTATTGAGAAATTACGAGAATCAACCATAGGCCGAAGGGACACTAATCTAGTTCAGCTTCCCTTGTCTCTTCTGTTGGTCACCAAAAGAGGTGTTGGTTCAATTTCTGACATTGGGGGTGAAACAGCACAAAGCCTCATCCAACACGGTCAACAAGTGGCTGGCAAATTTCAGTGCAGTTATTTAGAGCCTGCTTCCCCAGGTGTGGGCTATGGTCGCAATATAAATGAAAAACATTTAAACCAGATCCTCAAAGGTCTGCTAGACACACGAAGACCGTCAGTTAGTCTTGGCAGTAGCTCCCCACCCTTGTTGCCTGCACCTGCAGGTTTCAGAGACTCTCAGCAGAACACAGAGGCTGACTTACGAATCGTAATGTGTCTAATGTGTGGAGATACTTATGATGTTGACCAGCTTCTTTCACCATTCTTGCTGCCCCAGCACTGTCGGCCCTCTTCCAATCTATCCAGTGGAACATCAGTTTTGTTGGATTTATCTATTGGTGGCCAAAGGCAAAGCATTGATCTTCTTGTTCTATCTTACCACTCATGTTTTTCCTTGCGTAAAAGCAGATTGGTGCATGGTTACATAGCAGTGTACTCTGCCAAACGGAAGGCTTCCATGGAAACCCTTTGTGCCTTCCTTTGTGAGGTCCAAGACATTATTCCAGTGCAGTTGCTTGCTGTTGCAGAGACTCAGTCGGAGCTCACAGACTCTGAGGTTGTCCGAGAGCGGCTTGCCCAAGGGGAGGAACTGGCCCATGAAATTGACGCACGTTTCAGCTCTGTGATCTGTGGACCTGGTGGTGTGGTGGGAGGATTGCATCGGATAGACCACTTCCAGCCATTCTTTAAGGAAGTAGTAGAGAAAAAAACCATTGTAGAAGCAACACATATGTATGACAATGTTGCAGAGAATGTCACCAGTAGTGAGAATGTTTCTTCACCTCGATGTGGCTCTCCAAGCATCACGTTGCTGGACTCTGAGGATGACATTGAGCCCTCCCCACCTTATCCCACCCTAAGGGATGATGGCACCTTGACCCATGGTGGAGGTTTCAAGCTCCCTGATTTGGAAGGTGATGCCTTCTCACTCATCTCTGACATCACCACTTTTGAAAACAAGCTTAACAACAAAGTCCCACCTCAGGTGCGACCAAAGCCCAATGTCACCTTTGACATTCCCAAACCCCAAAACATCAGTTCATACATGGACCTGGGCCTACATGGACACAACAGGCGCTCATTAGTCACCTGGCCACCAGGAACTGAAGGTGGTTATGATCCATCTGATTATGCTGAACCCATGGATGCAGTAGCAAAGCCTCGTCCCACAGAAGAGGAGAATATTTATTCTGTACCACATGACAGCACACAGGGCAAGATCATCACTATTCGCAATGCAAACAAGAGTCATTCTAATGGTGCAGGAAATGGATCAGACAGCGAGGCTGATAGCAGTTCATTAGAGCGTAGACGAAAACTGTCTGCTCTTGGAGTTAAACCTCGGCTATATCGTGATCGCTCCAAACGTCTTGGAAAGTTTAGCAGCTTCCGCACAAGCTTTATTGGCAGTGATGATGAGCTTGGAGGTCTCCCCAAGACTAAAGAGGATGAGCTTGGTGCACAGAAAGGGGACAGTTCCTTAAATGAAGAAGGCGAGGACCCAAAGAGGAGGAATATCTTGAGAAGTCTTGGTAGAAGAACTACAAAGAAAACGCGGCCAAAGGCTCGTCAGTCATCGTTGTCCAAACCTCTTGAGAGTAACTACTTTGGAGTTCCCTTGGCCAACGTTGTCTCGGCTGAGCGGCCCATTCCACTCTTCATTGAAAAGTGTATCCGTTACATCGAGACTACAGGCAGAAATGAAAGCACAGTCACAGCCTGTTACGTAACCTCAGTTTTATATAGTTTCTATAGGGATCCATTTTCTGTCCCTTCCGTTCTGCCCTCTGGACCAAAAATACTTGCGTTCCCCTATTGTTCCTCTCATTTCCTGTTCATTCTTCTAGGGTTGAGCACAGAGGGAATCTACAGGGTGAGTGGAAATAAGGCGGAGATGGAAAGCATGCAGCGACAGTTTGACCAGGACCCTAACATTGACCTGATCGAGAAGGACCTGTCTGTGAACACAGTGGCTGGAGCTATGAAGAGCTTCTTCTCGGAGCTGCCCGATCCTCTGGTACCCTACAGCATGCAGGTGGAGCTGGTGGAGGCCTTCAAAATCAATGATCGAGAGCAGCGTCTCCACACCATGAAGGACGTGCTACGCAGGTTCCCTCGAGAAAACTACGACGTCTTCAAATACGTCATCACTCACCTGAACAAGGTGAGTCAAAACAGCCGCCTGAACCTGATGACCAGCGAGAATTTGTCCATCTGTTTCTGGCCGACGCTAATGCGGCCCGATTTCACCACCATGGATGCGCTGACGGCCACTCGCACCTACCAGACAATCATCGAGACCTTTATCCACCAGTGTGCTTTTTTCTTCTACAATCAACCCTTGGCCGACACACCCAGCGGCCTGTCCGGACAGCCCGCCTCGCCTACCGCCACCTTGTCTTCTGCCTCCTCCATGCCAGGCTCCGCCTACTCCACCTGTTACACCCCACTACAACCCATAGCCCCGCCTTTTAGTCCTGCCCAACAGTCCCCGCCCCATTCTCCACCCCATACCCCTCAATCCCCAATCCAGAGCCTGCTCCCTCCGCTCCATCCTCATCACACCCCTACGGAACAACACACGCTGTGAACCTGCAGACGAGGAGGAGAACTTTGGGAGCACTGAATGAGATTAATTGAATGGAAGAAATTTCCGAGGAGATTGCACGGCTGTGCCTGACTTATCGCAAGCAAAAGCAGAAGAGGAACGAGAAAGAAAGAGGTCAAGAGTCCATGAGCTGCGTCAACCACACTTCATCGCCCTCTTTCTGCATCACGCTACTCCATAAATTGCAGCGACGCTCTGTCCCTTTACGCTCCTCACACACACATATACAACTGCACATGAAGTGTGGTACCCCCAAACTCTGATTTCTTATGGGTCCACGTGACGTAGATGCCTCACTCTTGCTGGTTCAGTGTTGTCTTCATCGACCAATGGGCTGAACCCCACCACTGTACGCAACCTCCTAGGATTAAGGTTAAGCGTGCTAACAGGGAGGCCTATATATTCACCAGATATTTGTTGCAGCTTTCGACCATTGTTATTATCAAATTCCGAAAAAGAAATGCTTTTTTCTGACACAGCAACACAACCACATTCCTGCCCCTTATTTATCCTGTTTCGCTTCTAACAGCCTTTTACAGAGGGACGAAAATCAAAAGACAAAACTAGAACTTGACGAACTGGATCTAGTTTTGCTGGGATGGATGTGTGTGGAATGCTTTTGCACAGCATTCTGGGATTTGAAGTCTTTTCCGCACCTATATCTCTTGTCACATGACCCTCCAGAACATGCTGGAAGACTAATGCTTCTTTTATTGCAGAATGTCCTCACATCCACACAACCCTCAATTTACTGTTCCATGAGGGTCTTCGACTTTGTTCATTGTCTGTTTTCATTTGGGAGATGTATTATTTTTCTTTTTACACGTTTGCAGGAAGTCCCTCCCTTCTAGCTCATGTTAGTTTTGTGGACTACTTTTTGTGCAACGAGTGGTGACTTTTAAGGATGGGTTAGGTTGTGGTCCACCTGCATTTGGAGGGGAGGTATGCACTAAATCAAGAGTTACCTCACGATGTGAGTTCTGGAAGGTAAAGGAAGTTTGCACTAGAGGAGACGCTGTCTGCCTGTAACTATTCAGATGGCAATGAATCAGTGAACTGTGGTAGCCTAGAGGAGGAAGATAGAGACGATAGTAGTAAAGATGGATGGAAATAATGGCTTTTGGGAAAGATAAAGTCTTTAATGTGTTTGAAATCAGAGATGCTGATTTTATGCTGAATATGAGCTTGCAGTTAGTGGCTTTTGTCAAGTCTAACTAAATATCTGTACTTCAGAGTTGACCTCAGAAGGATGACATTGTTTATAAAGTTTTTAAAAGAAAGATTAGGGGAAGAAAACGTGGGCACGGAAACAGGAAAGTTAATGTGGTAGCTTGTGACTAGACCTTTTCCCTTTGTCGGCTCTTGGAGCACAACACTACCACCCAGTGGACAAAGCGGGTATTGCATGTTAAATTTCAGCCCGTTTTCATGCTAATGCTACATTTTTGTTCGTTTTTCTAGAAAATGCTGGACGCATTTAAAATCACATCGATTCACTTTGTAGCAAAACGACTAAAAAAGCAGAAACACCAATATTCCCCAGCACTTATACCTTGTTAAGTGAGTTTACTCGCTCCAAATTAGATCATTTTCTATGACTTTTGTGTTAATTTGAACGTTTGTTGTGAGCCATGGTTTTCAAGCGGAGCAGACATTGTGAAACTGTGAAACAATCACGTTTATGGAGATAAACGAATGTATCCTACAGCAGATTTCACTTCATTTTTGTGCATATCTCTCCCTGTAATTCATGTTAATTCTCAACATCAGTAAGTGAACCACAACTGCCCTGACCCCTTTTAACATGTCAATCAACATCTACGCTGACTTCTGATTGGCTGTGATGAGCTGCAACTCTGCTTAAACACTACGTCTTTTGCCCTCAGAGAGCAGAAATACTGGTATATTTTGGGAAATCGGGAGCTGTGTGGCCTGTACGCCCCTGGTACTTTGTGTATGAATGCTGCATTCTCTGTGTATTTTCAGTGTATATTCTTTCAGAGGCGACTGTCCTTCGCAGCCAAAGACTGTGTGGAAAAAAAAAAAAAGA

Function

symbol description
arhgap35 Enables GTPase activator activity and phospholipid binding activity. Predicted to be involved in several processes, including axon development; establishment or maintenance of actin cytoskeleton polarity; and regulation of plasma membrane bounded cell projection organization. Predicted to act upstream of or within several processes, including negative regulation of Rho protein signal transduction; negative regulation of vascular permeability; and nervous system development. Predicted to be located in ciliary basal body and cytoplasm.

GO: NA

KEGG:

id description
K05732 ARHGAP35, GRLF1; glucocorticoid receptor DNA-binding factor 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000154_01057020_01083988.mRNA True 7086 mRNA 0.46 7 1056784 1086056

Neighbor

gene id symbol gene type direction distance location
CI01000154_01001933_01010068 NA coding upstream 46202 1001894 ~ 1010582 (+)
CI01000154_00956115_00973357 RAB4B, MIA-RAB4B, RAB4A coding upstream 83102 955030 ~ 973682 (+)
CI01000154_00902311_00907798 RHOUB coding upstream 148789 902054 ~ 907995 (+)
CI01000154_00887422_00890641 NA coding upstream 165841 887422 ~ 890943 (+)
CI01000154_00776484_00783606 CALML6, CALM2, CALM3, CALM1 coding upstream 273102 776484 ~ 783682 (+)
CI01000154_01134763_01169402 NPAS1 coding downstream 48707 1134763 ~ 1169416 (+)
CI01000154_01186882_01191062 NA coding downstream 100826 1186882 ~ 1191062 (+)
CI01000154_01191290_01198704 NA coding downstream 105234 1191290 ~ 1198707 (+)
CI01000154_01223636_01242177 NA coding downstream 137494 1223550 ~ 1242177 (+)
CI01000154_01258168_01258920 RAB34 coding downstream 171461 1257371 ~ 1258920 (+)
G361729 NA non-coding upstream 60708 995854 ~ 996076 (+)
G361728 NA non-coding upstream 61587 994972 ~ 995197 (+)
G361726 NA non-coding upstream 63186 993387 ~ 993598 (+)
G361637 NA non-coding upstream 65552 981793 ~ 991232 (+)
G361670 NA non-coding upstream 86710 967354 ~ 970074 (+)
G361735 NA non-coding downstream 13985 1100041 ~ 1100269 (+)
G361738 NA non-coding downstream 15462 1101518 ~ 1101840 (+)
G361653 NA non-coding downstream 161200 1247256 ~ 1248166 (+)
G361680 NA non-coding downstream 163013 1249069 ~ 1249454 (+)
G361683 NA non-coding downstream 163509 1249565 ~ 1250590 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009026 arhgap35a coding NC_007126.7 CM002899.2 8604477 ~ 8763106 (-)