G361670


Basic Information

Item Value
gene id G361670
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 967354 ~ 970074 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU412465
ATAACGCTCCGAAGCTTCCTGAAGCAGTATTTTGAAATCGGCCATCACTATATAAGTCGTTATTTTGTTTTTGTTTTTTGTGGGGAAAATGGGGAAAAAATTAAACCAGAAACCTAATTTCTAAAAACAGAGGCAGACAGAGAAAATGACTGTGGCGTTGTATTGGATCATCTCCAGGTTGCCATGCAGCTGTCATAATAATAGAGACAAAGACAATGGAGTAATAAAGACTGACAGCACTGTGATAAAATGTCATCTTCTGGTGAGCGGCAACCCTGAGTCCATTTGACGGAGTGTGAGCACAGTGAGAGAGAGATGAACACAGTGATGGATTGTGTGTTTGATGAGGGTCATCCTTCAGCACTGAACTGCCATCACTGCAGCTGCAGACCGGAGACACTTTCACTGCGTTACACTGAAACACATTTAATACGCTCCCTTTCGCTCGTTGCTGTGGCCACAGGCTAATGGTTGCCCTGGAGACCAGTGACTCAAACAAAACTAGATTCCCTGAANNNNNGACGAACGCGCAGTGAAGAAATGTGAAGGGCATTATGAGTCGTGTATTGTCTCGTCGTTTCATAAAGCACTCAAAGGTCATCACAGACATTGACTTCTGAGAAGTGGAGTTAACAGTAAAGTATGTTAAATGTTCGCTGTTATTCACTCACAAAGGCAGTTTCTGTGGGACTGATTATAAATGGTAGAACGCAGGGTAAATATTGGGTTAGCAACTGACCTGGCCATTCTCTGTCAACATACTTCCTGGTATCATTCTGCTCAGTTTATCTCTACAGGTTATAAATATTTGTGCTCATAATTGTTGTTAACTTGCTCAATTCTGAAACCACTTTCCTTTTCATTCGACTAAGCTGCACATGCTATTGGTTAATGTTCAAGCATTGTTTTAGGCTACTATTGGTGCTCGGCTCGGTTCGGCTTGCTTTACTTTCGGTTTGCTTTTCCATTGCAGTACCGCTTCAAAGTGGGTGGGATTATAGACTGATACGCCGCCTTTACTGTCATGGATCCGCTCCTTGTCTACTAACGAGTCTGTCTGTCCTCGTTTACTGACCATGATACAGCCATTTCTTTTTTCAAGTTGCGTGCGACGGTTGTTTAAAGTAAGTTGTTTCAAATAAGATGAACAAATGATACTGCGGTGGCTGTTACTGACTATTTAAATCTAGTAGGTTCGGTGTCTTGTGTTTCAAATCCAATGACGCTGGTAGTGACGATTCTCTCTGACCAATCAGTGATCTGCAGTGTTCACACGTCACATTTAGTATTGGTATGGCACGCTTGGAACCTCAACCGAGGTGGTACTATTTAAGCAAGCTGTACCGTTCTGTACCGAGCTGTCCCATGCAGTGGAAAAGCGACAAAAAGTGAGCCGAACCAAGCCTTACCGAACAGTACCATGGAGTGGAAAAGCATCATAAATTAGGTAATAGTTAATTTCTGAAATGTTGCCAGTGGTTATCAGTAACTTAATGCCTGGCAATGTAATAGGGATTATGGCAATAATAGCAAATAACAACAGGTTTGAAAGCATGAATACTCACCAAGACCGGCATTTTGACATTATTTGTCTTTAATTGACTGTTTAAGTGCAATAAGCAGTGAAAAAGAACTTAGTTCTGAGAGGCGGCTTTATGCGCACGCTCTTGTGTAAGCACAAAATCTGTGGGAATGAGTAAAATTATGTGCAATATGCACAATCCCATGCCGAAATTCAAGCCCTGTAACACTAACAATATTCATCCAGAGCAAATGAATCAAGTGAGTGAGGGAAGGCGGGTATTTTGACAATGCTACATTGCACTTTGTTTATTATTTCAGATGCCTTTTTATAAGACTACAATTGAAAAATGTAGCCTATATATTGTATATAAAATTCAACCCACCAAAGTGGCTAGTAGGAGTGACTGCATTACACATCACTGTGAAATTTACAAGCTGGAAATTATACAGCTGTTAAGTAGTTCCTCAACACATTTTTTTATTGATGCTTTTAAGACTAATTTTTGTGACTTGTGATATATTTGTTGGTTGGCTATCTTTGTTGCAAATCAGCAGAATTTGCAACAGCAGTGCTGAATAACTTGAATTAAGTAACAAATTATTAAATAATATGAATCATACAACTACTGTAAGTAAATCCAACCTACCTTACCCAGATATATACAGTACACTCANNNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412465 True 2203 lncRNA 0.40 2 967354 970074

Neighbor

gene id symbol gene type direction distance location
CI01000154_00902311_00907798 RHOUB coding upstream 59359 902054 ~ 907995 (+)
CI01000154_00887422_00890641 NA coding upstream 76411 887422 ~ 890943 (+)
CI01000154_00776484_00783606 CALML6, CALM2, CALM3, CALM1 coding upstream 183672 776484 ~ 783682 (+)
CI01000154_00753231_00755134 TRAPPC4.S, TRAPPC4 coding upstream 212220 751150 ~ 755134 (+)
CI01000154_00709450_00737541 SACS coding upstream 229110 708287 ~ 738244 (+)
CI01000154_01001933_01010068 NA coding downstream 31820 1001894 ~ 1010582 (+)
CI01000154_01057020_01083988 ARHGAP35 coding downstream 86710 1056784 ~ 1086056 (+)
CI01000154_01134763_01169402 NPAS1 coding downstream 164689 1134763 ~ 1169416 (+)
CI01000154_01186882_01191062 NA coding downstream 216808 1186882 ~ 1191062 (+)
CI01000154_01191290_01198704 NA coding downstream 221216 1191290 ~ 1198707 (+)
G361694 NA non-coding upstream 104437 862679 ~ 862917 (+)
G361631 NA non-coding upstream 120112 846718 ~ 847242 (+)
G361628 NA non-coding upstream 130752 836345 ~ 836602 (+)
G361627 NA non-coding upstream 132991 834103 ~ 834363 (+)
G361605 NA non-coding upstream 169577 794129 ~ 797777 (+)
G361637 NA non-coding downstream 11719 981793 ~ 991232 (+)
G361726 NA non-coding downstream 23313 993387 ~ 993598 (+)
G361728 NA non-coding downstream 24898 994972 ~ 995197 (+)
G361729 NA non-coding downstream 25780 995854 ~ 996076 (+)
G361735 NA non-coding downstream 129967 1100041 ~ 1100269 (+)
CI01000154_01258168_01258920 RAB34 other downstream 287297 1257371 ~ 1258920 (+)

Expression


Co-expression Network