G361728


Basic Information

Item Value
gene id G361728
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 994972 ~ 995197 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU412524
AAAAGAACAGCATTTATTCAAAATATAAATCTTTACTATCACTTTTTATCAATTTAACACATCCGTGCTGAATAAAAGTATTAATTTCTTTCAAAAAAAAAAGAAAGAAAAAAAATTACTGACCCCAAACTTTTGAACGGTAGTGTATATTGTTACAAAAGATTTCTATTTTAAATAAATGCTGATATTTTTTAACTTTTTAACTGTTTCCAACATTGAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412524 True 226 lncRNA 0.22 1 994972 995197

Neighbor

gene id symbol gene type direction distance location
CI01000154_00956115_00973357 RAB4B, MIA-RAB4B, RAB4A coding upstream 21290 955030 ~ 973682 (+)
CI01000154_00902311_00907798 RHOUB coding upstream 86977 902054 ~ 907995 (+)
CI01000154_00887422_00890641 NA coding upstream 104029 887422 ~ 890943 (+)
CI01000154_00776484_00783606 CALML6, CALM2, CALM3, CALM1 coding upstream 211290 776484 ~ 783682 (+)
CI01000154_00753231_00755134 TRAPPC4.S, TRAPPC4 coding upstream 239838 751150 ~ 755134 (+)
CI01000154_01001933_01010068 NA coding downstream 6697 1001894 ~ 1010582 (+)
CI01000154_01057020_01083988 ARHGAP35 coding downstream 61587 1056784 ~ 1086056 (+)
CI01000154_01134763_01169402 NPAS1 coding downstream 139566 1134763 ~ 1169416 (+)
CI01000154_01186882_01191062 NA coding downstream 191685 1186882 ~ 1191062 (+)
CI01000154_01191290_01198704 NA coding downstream 196093 1191290 ~ 1198707 (+)
G361726 NA non-coding upstream 1374 993387 ~ 993598 (+)
G361637 NA non-coding upstream 3740 981793 ~ 991232 (+)
G361670 NA non-coding upstream 24898 967354 ~ 970074 (+)
G361694 NA non-coding upstream 132055 862679 ~ 862917 (+)
G361631 NA non-coding upstream 147730 846718 ~ 847242 (+)
G361729 NA non-coding downstream 657 995854 ~ 996076 (+)
G361735 NA non-coding downstream 104844 1100041 ~ 1100269 (+)
G361738 NA non-coding downstream 106321 1101518 ~ 1101840 (+)
G361653 NA non-coding downstream 252059 1247256 ~ 1248166 (+)
G361680 NA non-coding downstream 253872 1249069 ~ 1249454 (+)
CI01000154_01258168_01258920 RAB34 other downstream 262174 1257371 ~ 1258920 (+)

Expression


Co-expression Network