G361729


Basic Information

Item Value
gene id G361729
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 995854 ~ 996076 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU412525
TATTCTTTTACATATTTTAATACATACAGGTCAGAATAAGTATGTTGTTTCAACTGTTACACTGAATGACAATGGAACATTATTTCACCCACATTTTGACATTTTATTCTCCCAAAACTTGTTTGAAACCTTTAAAGTAGACGTTTTACTTGCATTTAATGTGATTTCTATGTATATAAAATCACTTTTGTAAATGTCTATCGATGCGGACATCTAAAAGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU412525 True 223 lncRNA 0.29 1 995854 996076

Neighbor

gene id symbol gene type direction distance location
CI01000154_00956115_00973357 RAB4B, MIA-RAB4B, RAB4A coding upstream 22172 955030 ~ 973682 (+)
CI01000154_00902311_00907798 RHOUB coding upstream 87859 902054 ~ 907995 (+)
CI01000154_00887422_00890641 NA coding upstream 104911 887422 ~ 890943 (+)
CI01000154_00776484_00783606 CALML6, CALM2, CALM3, CALM1 coding upstream 212172 776484 ~ 783682 (+)
CI01000154_00753231_00755134 TRAPPC4.S, TRAPPC4 coding upstream 240720 751150 ~ 755134 (+)
CI01000154_01001933_01010068 NA coding downstream 5818 1001894 ~ 1010582 (+)
CI01000154_01057020_01083988 ARHGAP35 coding downstream 60708 1056784 ~ 1086056 (+)
CI01000154_01134763_01169402 NPAS1 coding downstream 138687 1134763 ~ 1169416 (+)
CI01000154_01186882_01191062 NA coding downstream 190806 1186882 ~ 1191062 (+)
CI01000154_01191290_01198704 NA coding downstream 195214 1191290 ~ 1198707 (+)
G361728 NA non-coding upstream 657 994972 ~ 995197 (+)
G361726 NA non-coding upstream 2256 993387 ~ 993598 (+)
G361637 NA non-coding upstream 4622 981793 ~ 991232 (+)
G361670 NA non-coding upstream 25780 967354 ~ 970074 (+)
G361694 NA non-coding upstream 132937 862679 ~ 862917 (+)
G361735 NA non-coding downstream 103965 1100041 ~ 1100269 (+)
G361738 NA non-coding downstream 105442 1101518 ~ 1101840 (+)
G361653 NA non-coding downstream 251180 1247256 ~ 1248166 (+)
G361680 NA non-coding downstream 252993 1249069 ~ 1249454 (+)
G361683 NA non-coding downstream 253489 1249565 ~ 1250590 (+)
CI01000154_01258168_01258920 RAB34 other downstream 261295 1257371 ~ 1258920 (+)

Expression


Co-expression Network