CI01000171_00506482_00509615


Basic Information

Item Value
gene id CI01000171_00506482_00509615
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000171
NCBI id null
chromosome length 912836
location 505755 ~ 509726 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000171_00506482_00509615.mRNA
ATGAGTGTGGAAGGGGGTGTGTCGGCCAAGAACCTTCTTATAAATCTCAGCCCTCCCAAACAGGACGCAGCACTCGCCTGAAAACTTTCGGAGCAAGAGCAAACTTCAGCCATGGCCGAGAGACGCATTCCCTTCAGCTTCATGCACGGCCCATCCTGGGACCCTTTTCGCGACTGGTACCAGGGCAGCCGGCTCTTCGATCAAACCTTTGGGATGCCACCCTTCTCCGAGGAGATGCCCACTTTCCCGAGCACGCACTGGCCCGGATACATTCGGCCCTTTGTACATCCCGACATGCCCTCTTTAATGCAGAGCCCAGCGATGGCTCAGATGCCCATGTCACCCCCCGCGGTGATGGTGCCTCCAAACTACGGACGGGCCCTTTCCCGACAGCTCAGCACGGGAATGTCTGAAATAAAGCAGACGCAGGACGCCTGGAAGATCAGCCTGGATGTCAATCACTTCGCCCCAGAGGAGCTGTCGGTGAAGACCAAAGATGGAGTGGTGGAGATCACCGGCAAACACGAGGAAAGGAAGGATGAACACGGCTTCGTGTCCAGATGTTTCACCAGGAAATACACTCTGCCCCCTGGTGTCGACTCTGAGAAGATCACCTCCTGTCTGTCTCCTGAGGGCGTCCTGACCATCGAAGCTCCTCTGCCCAAACCTGCAATCCAGGGCTCTGAAATCAACATCCCTGTTAACACAGGCAGCAGCACAGCGACCGTCAGCGCCACAAAGAAACCCTGAGCACTACAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAGATAACAATTTTTTTCAGCATGAAAGTCTTGCTACTTCTGGTCTATGTAAACTACAGGTAGGAGAAGATGGATCGCCGTACTGCATTCCCATCTCATTTTTTACGTCTTTCTATTTCATCTTTGTCACTCTTTCTTCTCTTCCTCTCTTCTACTTGTAGTAAATCAGTGTCTATGTACACAATCTCTTGAAAACATGCTCATATTTCACTCCCAAATCAAATTAAAAATTAAAAAACAGCTTGCTTCATGACCAATAATATATTGTCATGGCAATTAACCATTTTACCCCAAATACTTATAATGGAAAAATATTATTTATTTATATTTTAAATAAAATTGTGCATATAGAGTATTGATATTTAATTATATGCATTTTTTTTTAAATATTGAGAAACCCATTTTTATTATGACAATAATGAGAATGAGATTTTTTTTTTTTTTTTTGGCACTACAGTAATGTGAGAATCGAAAAATGTCACAATTTAAATGCTTCTAAAATATGATTGGTCTTTATGCAAGTCTTTTGATTTTGAGATGAATTATGATATTTCTTCAGGAGCTTCACATAACTGCAGTTTTACTATATATGCTGGTTTTGCTACAGTTTTAACACCTTTTTTGAACCACTAGCAAACATACACAGTCAGGCACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000171_00506482_00509615.mRNA True 1477 mRNA 0.44 3 505755 509726

Neighbor

gene id symbol gene type direction distance location
CI01000171_00435644_00442897 NA coding downstream 62711 435087 ~ 443044 (-)
CI01000171_00340448_00356867 NA coding downstream 148888 338756 ~ 356867 (-)
CI01000171_00299408_00304370 NA coding downstream 201343 298735 ~ 304412 (-)
CI01000171_00167413_00206328 NA coding downstream 299248 167084 ~ 206507 (-)
CI01000171_00066606_00089075 MTMR4 coding downstream 416680 66413 ~ 89075 (-)
CI01000171_00530302_00562539 NA coding upstream 19194 528920 ~ 563245 (-)
CI01000171_00608319_00641115 NA coding upstream 98068 607794 ~ 641753 (-)
CI01000171_00650378_00659595 NA coding upstream 140585 650311 ~ 659595 (-)
CI01000171_00659729_00660264 MYO19 coding upstream 150003 659729 ~ 660264 (-)
CI01000171_00663431_00666879 NA coding upstream 153705 663431 ~ 666879 (-)
G372129 NA non-coding downstream 84498 420513 ~ 421257 (-)
G372111 NA non-coding downstream 126150 363649 ~ 379605 (-)
G372114 NA non-coding downstream 195677 309514 ~ 310078 (-)
G372130 NA non-coding downstream 347810 156782 ~ 157945 (-)
G372103 NA non-coding downstream 351260 143823 ~ 154495 (-)
G372211 NA non-coding upstream 4428 514154 ~ 514382 (-)
G372212 NA non-coding upstream 5064 514790 ~ 514998 (-)
G372135 NA non-coding upstream 7006 516732 ~ 517023 (-)
G372142 NA non-coding upstream 58907 568633 ~ 569082 (-)
G372136 NA non-coding upstream 62859 572585 ~ 580079 (-)
G372133 NA other downstream 34447 453246 ~ 471308 (-)
G372125 NA other downstream 75873 383328 ~ 429882 (-)
G372104 NA other upstream 77051 586777 ~ 645374 (-)
CI01000171_00881122_00881454 NA other upstream 353553 880746 ~ 881454 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location