CI01000171_00822608_00823794 (SAT1A.2)


Basic Information

Item Value
gene id CI01000171_00822608_00823794
gene name SAT1A.2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000171
NCBI id null
chromosome length 912836
location 822412 ~ 824057 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000171_00822608_00823794.mRNA
ATATAAATAGCGCTCGAGCTTAGCGTTCACACAAAGCGCTTCCGGCGACGACTTCATGTGATTCTTCATTGACAGGGTGAGAAACCCAGACTTTCTGCTGAGGGTAGCCCCCTTGGAACCGAATGAAGAAACAAATCTTACTACATTTCACATACCGAGGACTAGTAAGAAAAGGGAAAAAGAGTAAAAGAAGAAAATGGACAAGTTTATATTACGGAAAGCCGAGCCCAAGGACGTATCGGACATACTGCGACTCATAAAGGAACTTGCGAAATTTGAGGAAATGGAGGAACAGGTCGTCCTGACCGAGAAAGGTTATACAGTGGTTGGCTTTGCCATGTACTACTTCACTTATGACCCCTGGATTGGGAAGCTGCTTTATCTGGAAGACTTCTATGTGATGAAGGAATTCAGAGGTTATGGAATGGGCTCTGAAATCCTGAAGATGCTGAGTGAGACGGCAGTGAAGACTCGATGCAGCGGTATGCACTTCATCGTGGCCGAGTGGAACACGTCCTCCATCGAGTTCTACAAGCGGCGCGGAGCTTCAGATCTCTCCCACGAGGAGGGATGGCGTCTGTACGAGATTGACAAGTGCAACCTACTCAAGATGTCATCCAAGTAGACGCCAGTGCAGGAGAAAACGTTAAAGGAGCATTTCAACAGCAATAGAGTAGATCAGTGTTTCCCAACCCTGTTCCTGGAGGCACACCAGCATGACACATCCTCCTAATCAAACGCACCTGATTCAACTCGTCAGCTTGTTAGTAGAGACTCCAAGACCAGAAGCAGAAAGGAGACATCCAGAATGTGCGCTGTTGGTGTGCCTCCAGGAACAGGGTTGGGAAAACAACAACAGTTGATACACCTGCAATGTATCTTTTTAAA

Function

symbol description
sat1a.2 Enables diamine N-acetyltransferase activity. Predicted to be involved in spermidine acetylation. Is expressed in several structures, including digestive system; eye; gill; heart; and pleuroperitoneal region. Orthologous to human SAT1 (spermidine/spermine N1-acetyltransferase 1).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K00657 speG, SAT; diamine N-acetyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000171_00822608_00823794.mRNA True 888 mRNA 0.47 5 822412 824057

Neighbor

gene id symbol gene type direction distance location
CI01000171_00809393_00816099 NA coding upstream 5976 809202 ~ 816436 (+)
CI01000171_00799683_00803868 PRDX4, PRDX4.L coding upstream 18480 799683 ~ 803932 (+)
CI01000171_00693952_00694311 NA coding upstream 127389 693265 ~ 696311 (+)
CI01000171_00682164_00692362 GGNBP2 coding upstream 129574 682164 ~ 692838 (+)
CI01000171_00674688_00676154 PIGW coding upstream 146172 673633 ~ 676240 (+)
CI01000171_00846769_00849662 NA coding downstream 22712 846769 ~ 850304 (+)
CI01000171_00851863_00865333 NA coding downstream 27806 851863 ~ 867275 (+)
CI01000171_00895104_00901592 NA coding downstream 70943 895000 ~ 901690 (+)
G372069 NA non-coding upstream 29119 791922 ~ 793293 (+)
G372066 NA non-coding upstream 31021 790240 ~ 791391 (+)
G372091 NA non-coding upstream 57183 760236 ~ 765229 (+)
G372084 NA non-coding upstream 98107 723879 ~ 724305 (+)
G372082 NA non-coding upstream 102983 719186 ~ 719429 (+)
G372067 NA non-coding downstream 46974 871031 ~ 872098 (+)
CI01000171_00642357_00643803 RPAIN other upstream 178566 642141 ~ 643846 (+)
CI01000171_00461211_00476263 NA other upstream 346394 461211 ~ 476449 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G266171 NA non-coding CI01000063 null 7128316 ~ 7149391 (+)
eurasian perch (Perca fluviatilis) G223239 sat1,LOC102777910 non-coding NC_053133.1 CM020930.1 25658589 ~ 25721181 (-)
bowfin (Amia calva) AMCG00016473 sat1a.2,sat1,LOC107562204,LOC107591482,LOC107725150,LOC107654323 coding CM030122.1 CM030122.1 20393597 ~ 20398749 (-)