CI01000186_00225560_00231307 (CEPT1, CEPT1B)


Basic Information

Item Value
gene id CI01000186_00225560_00231307
gene name CEPT1, CEPT1B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 225560 ~ 231570 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000186_00225560_00231307.mRNA
ATGGATTCGTCGTGCTGGTTCACCCCCGGCGCTCTGCGGCGACTGTTCGAGCTGCCGGCACCGGTTCTGTCACGCCACCAGCTGAAGCGTTTGGAGGAGCATCGCTACAGCAGCTCGGGACGCTCGCTGCTCGAACCCGTCATGCAGCGCTACTGGGAGTGGCTTGTCGGCAGAATGCCACCCTGGATCGCGCCCAACCTCATCACCATTGTCGGCCTGGCGACCAACATCTTCACAACACTGGTGCTGGTGTACTACTGCCCGACTGCAACCGAACAGGCTCCTCTCTGGGCATATCTCCTGTGTGCGGTGGGCCTGTTTGTCTATCAGTCGTTGGACGCCATCGATGGAAAACAGGCCAGACGCACTAACAGCAGTTCACCACTGGGGGAGCTGTTTGACCACGGCTGTGATTCGCTCTCCACAGTGTTTGTGGTGTTGGGCACCAGTATAGCGGTTCAGTTGGGCTCTCACCCCGACTGGATGTTCTTCTGCTGTTTCGCCGGCATGTTCATGTTTTATTGTGCCCACTGGCAGACGTACGTCTCCGGTACGCTGCGCTTCGGCATACGTTTACGACTGCAGTTGGGCCCACGTTTTGGAACACAACGCATTGATGTTACAGAAGTGCAGATCTTCATTATTCTCATGTATTTACTGGCTGCTGTGGGCGGATCGGCTTTCTGGCAGTCTCGGATTCCCGTCATAAATATCCAGATGAAAATAATTCCTGCACTTTGCACGTTTATTGGGGTGGTTTTCTCCTGTACCAATTACTTCCGAGTCATATTTACAGGCGGCGTGGGGAAAAACGGATCCACGATAGCGGGTACGAGTGTTTTGTCTCCCGTCCTGCACATCGGCTCAGTTATCGTCCTCGCTATGATGATTTATAAAAAATCAGCCGTCCAGCTCTTCGAGAAACACCCGTGTTTGTATATTCTGGCCTTCGGCTTCGTATCGGCCAAAATCACCAATAAATTAGTGGTGGCTCACATGACCAAGAGCGAGATGCATCTTCACGACGTGGCGTTTCTAGGCCCCGGCCTGTTGTTCCTCGATCAGTACTTCAACAGCTTCATCGATGAATATCTGGTGCTGTGGATCTCTCTGATTCTGTCCCTCTTCGATCTGGTGCGCTACTGCGTGAGCGTCTGCAACGAGATCGCGTCTCACCTGCGCATCTGCGTCTTCAAAATCAAGCCGCAGCCGCCCCTCGAGTGACCTCTGACCCCAAATTCATCCTCTTCCTGCACTTTCATCCTGCTACTGTTACTCATCCGAGACTTATTTAAACCGTTCTGCACTTAGACTAATGCAGTTCTTCATCCCCAGTGAATGAACGAACAAATAAATGAATGAACGAACTTCACCAAGTCACTTTTCTTTAGATGATTATTTTAAGAAGACAACAGATGTTGAAACGTTTGGGTCTGTGTTATCATTTTAACGCTGCGTTTGACTAGTTCTCACATATTTAAATCGGA

Function

symbol description
cept1b Predicted to enable diacylglycerol cholinephosphotransferase activity and ethanolaminephosphotransferase activity. Predicted to be involved in phosphatidylethanolamine biosynthetic process. Predicted to act upstream of or within phospholipid biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum membrane. Orthologous to human CEPT1 (choline/ethanolamine phosphotransferase 1).
cept1 Predicted to enable diacylglycerol cholinephosphotransferase activity and ethanolaminephosphotransferase activity. Predicted to be involved in phosphatidylethanolamine biosynthetic process. Predicted to act upstream of or within phosphatidylcholine biosynthetic process. Predicted to be located in nuclear membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum membrane.

GO:

id name namespace
GO:0006646 phosphatidylethanolamine biosynthetic process biological_process

KEGG:

id description
K13644 CEPT1; choline/ethanolamine phosphotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000186_00225560_00231307.mRNA True 1487 mRNA 0.51 9 225560 231570

Neighbor

gene id symbol gene type direction distance location
CI01000186_00209162_00212762 KCTD20 coding upstream 12423 209162 ~ 213137 (+)
CI01000186_00192359_00208026 CACNA1S, CACNA1SA, CACNA1SB coding upstream 17249 192359 ~ 208311 (+)
CI01000186_00190672_00191178 NA coding upstream 34202 190154 ~ 191358 (+)
CI01000186_00133147_00140951 LAMB3 coding upstream 84609 133147 ~ 140951 (+)
CI01000186_00120791_00130397 NA coding upstream 95163 120791 ~ 130397 (+)
CI01000186_00235234_00237816 DRAM2, DRAM2B coding downstream 3327 234897 ~ 238121 (+)
CI01000186_00252556_00256882 NA coding downstream 20986 252556 ~ 257269 (+)
CI01000186_00272056_00278805 RBBP5 coding downstream 40098 271668 ~ 279177 (+)
CI01000186_00295882_00296578 BTG2 coding downstream 64099 295669 ~ 296951 (+)
CI01000186_00402892_00406010 APOBEC2A coding downstream 171322 402892 ~ 406133 (+)
G378117 NA non-coding upstream 60113 162974 ~ 165447 (+)
G378187 NA non-coding upstream 66984 158339 ~ 158576 (+)
G378184 NA non-coding upstream 72287 153065 ~ 153273 (+)
G378148 NA non-coding upstream 171797 53350 ~ 53763 (+)
G378147 NA non-coding upstream 172462 52874 ~ 53098 (+)
G378204 NA non-coding downstream 13860 245430 ~ 248174 (+)
G378213 NA non-coding downstream 85760 317330 ~ 317532 (+)
G378208 NA non-coding downstream 86592 318162 ~ 320122 (+)
G378300 NA non-coding downstream 257232 488802 ~ 492677 (+)
G378322 NA non-coding downstream 334426 565996 ~ 566341 (+)
G378108 NA other upstream 212065 11415 ~ 15229 (+)
CI01000186_00413028_00415878 SFRS3, SRSF3 other downstream 180250 412601 ~ 416323 (+)
G378343 NA other downstream 662938 881526 ~ 896717 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00013887 cept1,LOC105013905 coding CM030125.1 CM030125.1 45979106 ~ 45991807 (-)