CI01000189_00461716_00469154


Basic Information

Item Value
gene id CI01000189_00461716_00469154
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 461011 ~ 469298 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000189_00461716_00469154.mRNA
ACATCAGCTCTCTCTGTGGCCCTTGATTTGCATGGGGACAGCAGGAGCGCTAATACAATCCTGTAATGATTTTCTCAGTCGCAGAGAAAGTCAATGAGAAATCCTGTGTGTGTGTGTGTGTGTGTGTTTAATTAAAGGTGAGTAATGACTGAGAACGGAGCATGTGTTGTGAATGTGGCACGCCTTGGGGGCCAGGCCAGACCTGAAAAACCAGCTACCGCTTTCAGTCCAGAGAGCTCTGATATGGCATCGGCAGTTTGTGCGAAGGAAGGAGCGTGTGGACTATGCTCACTTCAGGCGATTAAAGGAGGGGGAGTGGAAGGATTGATTCTGTGGAGAGAGAAGCTCCACGACAGGGAACTGATTGTACAGGCTCACACTTTAAACCTTAGAGTGTATTATGGTCTATTTTATGGTGGTGTGAAACCAAGCTCCATACTGATGTCCTGTGATTCACCTTGTAGCTCCGGCAACAGAATTTACAACTATTTGCTGTTCTTTGGTGGTACAGGCACTGTATTTTTCTTTCCATCAGCTCTGATTGCTTCTGTCAGAAGTACTCATAAGAGCCAGCCTCGAACGTTATGGCCTGTCTGGACAAATCTAAAAATGCAAAGGGCGGCCACAACATCCGTGACCCAATCCACAATAACACAGAACACCACAGCCATCACCAAGTCTAGAGAACAAATCCTCACGCAGAGCTCAGGAGCCATGATAGCTGTAATCGTCATTGGTATAATCATCATTCTCACGTTTTTACTTATAGTCCTCAAGACGTACAACAGGAGGACACATGCAAACAGGATGCTGGCAGGAGGCTCCAGCAAACCACGAAAGAAAGCGTCCTCAACTACTACAAATACAAACCTGGCCATGAGCAACGTGGCTGCGAGCTCAGTCTCTGGAAGCTTTGTGCAGTCTAACGCATCCTCAGAGAACGGGTTCCGCATTCCTCGGGTCGACGTGGGAAACTTGGAGAGGAGTAATGGAGAGCATTTCAGCACCAACAGTGGCTCAACTATTGTGACAATACATGATATGCCATCAATAGATAACACATAGCAGACATTCTCTGGACTTACATGTGCAAAGATATTAATACCAAAATGAACAAAGAACCAATGGAAGAGGCCCGGTCATACCTGAGCACACACCATTAACTGAACATTCACTGCCCTTTTAGGATCTTATGGAACTTTGAGGACCTTAGATTTAAAAGAGTCTGTATATGATAATGAAGAACTTGAAGAAAACTACAGACAAGTGTCTGATGTGATGTGATTATAGTTTTTATTTTTAGCACTGGATTTGGTGATGAAATGTAGGTTAAAACAATGTAGGTTTCTGCCTTGAGCTAAAACGGTTTTCATCAGAAATGAAGTTGTGGGAGCCAGTTAGAGATGTTAAGGATGCTACATCAATGTATTACCAGGACATTTGCACTCTAATAGTAAAGTCTCTGATATAAGACTGTTCAAACATTATACTATTTTACTATGCTGAATATTCAAACTTTACATTTATGCACTTTGCAGACGCAGATACAAAGCTGTTTAGATTGCATTCAAGGTATATATTTTGTGTTCATGCAATCTGTGAAGCTCGAACCCATCACCTTGTCAGTGCTAGTGCTATTTTAGGGCTCAAGACTAGAACACCATTGGTGAGGTGGGAAAACAGTGTGCATAAATATGCAACATTTTTAGATGTTATCTGTATGCTGTTAGTAATTACATCTTTAGAAGTGCCAGTGTTTCCTGCATTAAA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000189_00461716_00469154.mRNA True 1770 mRNA 0.43 6 461011 469298

Neighbor

gene id symbol gene type direction distance location
CI01000189_00340265_00391583 DAAM2 coding downstream 69428 340265 ~ 391583 (-)
CI01000189_00166353_00175279 NA coding downstream 285561 166348 ~ 175450 (-)
CI01000189_00101529_00113231 NA coding downstream 347780 100988 ~ 113231 (-)
CI01000189_00078751_00085530 SUPT7L coding downstream 375481 78730 ~ 85530 (-)
CI01000189_00477967_00490706 RCAN3 coding upstream 8375 477673 ~ 492947 (-)
CI01000189_00496400_00496746 NA coding upstream 26617 495915 ~ 497348 (-)
CI01000189_00506407_00508897 NA coding upstream 37057 506355 ~ 508897 (-)
CI01000189_00510737_00516326 NIPAL3 coding upstream 40460 509758 ~ 516335 (-)
CI01000189_00527327_00527614 NA coding upstream 56982 526280 ~ 527662 (-)
G379943 NA non-coding downstream 157592 291768 ~ 303419 (-)
G379907 NA non-coding downstream 413808 46880 ~ 47203 (-)
G380066 NA non-coding upstream 127822 597120 ~ 597442 (-)
G380070 NA non-coding upstream 134221 603519 ~ 603731 (-)
G380071 NA non-coding upstream 135923 605221 ~ 605571 (-)
G380097 NA non-coding upstream 175990 645288 ~ 646111 (-)
CI01000189_00764790_00765233 ID3 other upstream 283959 764674 ~ 765776 (-)
G380177 NA other upstream 424922 894220 ~ 898517 (-)
CI01000189_02961166_02963382 NA other upstream 2489810 2960570 ~ 2963454 (-)
G381317 NA other upstream 2529575 2998873 ~ 3006444 (-)
G382060 NA other upstream 3361329 3830627 ~ 3832613 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location