CI01000189_00764790_00765233 (ID3)


Basic Information

Item Value
gene id CI01000189_00764790_00765233
gene name ID3
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 764674 ~ 765776 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000189_00764790_00765233.mRNA
ACATGCTATACTATAACGAAATTGAATTCTGAAACTAATTTCAATATGATATGGGGGAAAATATATGTGAACTTTAAGCTAAGTTTATATTTAATCTACTGTACAAGCTCACCCAGCTCCGTTTAGGTTTACTGACCCGAAATCTTCACTCAAATCCATCACTGAAAATACATCTATCTCTAGTATTCTGACAGCTCTTCCTCATTCCACCATTTTGTCTGACTGACATGCCAACGCTTCCAATGACGAGTTAGCTATTTACATAGGGCGGAGTCTCCACGCTTAAACACCTCTTACTATTGGCTGCGCGGCACATGAGGGTTTATTTATTTCTGGAGGGGGCGGTGCTACACGAAGCAGCTTTTAAAAAGCGGCTGCCTGCCTGCTCGTGCTGCCATCGTTCAATGACCGCGAGACGTGAAGGAGTCAGACATTGGATATCTATCAAACTGGAGAGCTAGTTCATCTCACTATCCAGACAAAGGACTTCTTCAGGCATCTCTACGGTTGGATTCTACTAGCAAGTCAGACGTCAGATCCAGAATGAAGGCGATCAGTCCCGTTCGCTCTGTCAGAAGCTGTTATGAAGCTGTGTGCTGTATCTCAGAGCAGAGTCTCGCGATTAGCCGCTGCAAGAGTCCCTCTGAGGAGCTGTCCGACATGAATGACTGTTACTCTAAACTCAAAGAACTGGTGCCCAGCATCCCTCAGAACAAGTCCGTGAGCCAAGTGGAGATTCTTCAGCATGTAATAGATTACATCTTCGACTTGCAGATAGCACTGGAAAACGAGACGGACTCACAAAACACGCCTGACATGTTCATGTCAATGAAGAGCTCAGAGATGACCCGTAATTTCTCCAAAGAGGATGGAGCTATGTGCCATTAGGACAGAGAAATGACAACGGTCAATGGTACGCTTCCGTTTCTTTATTTTAAATAATTTTACTTTATAAATTAGTCAGATGTTGTTAGGTTGTAATCCACACTCCCAAGAAAAATAAA

Function

symbol description
id3 Predicted to enable protein dimerization activity. Acts upstream of or within dopaminergic neuron differentiation. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in several structures, including digestive system; germ ring; nervous system; polster; and presumptive ectoderm. Orthologous to human ID3 (inhibitor of DNA binding 3, HLH protein).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K17694 ID3; DNA-binding protein inhibitor ID3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000189_00764790_00765233.mRNA False 1004 mRNA 0.43 2 764674 765776

Neighbor

gene id symbol gene type direction distance location
CI01000189_00744231_00759517 NA coding downstream 5157 744103 ~ 759517 (-)
CI01000189_00703680_00736690 NA coding downstream 27984 703262 ~ 736690 (-)
CI01000189_00557254_00592764 CNKSR1 coding downstream 171910 557203 ~ 592764 (-)
CI01000189_00527327_00527614 NA coding downstream 237012 526280 ~ 527662 (-)
CI01000189_00510737_00516326 NIPAL3 coding downstream 248339 509758 ~ 516335 (-)
CI01000189_00797964_00824109 MSRA coding upstream 30874 796650 ~ 824109 (-)
CI01000189_00831218_00832634 NA coding upstream 65225 831001 ~ 835086 (-)
CI01000189_00859327_00862617 YTHDF2 coding upstream 93010 858786 ~ 862617 (-)
CI01000189_01256704_01259709 NA coding upstream 490880 1256656 ~ 1259895 (-)
CI01000189_01289557_01297885 NA coding upstream 523494 1289270 ~ 1297912 (-)
G379936 NA non-coding downstream 63481 693692 ~ 701193 (-)
G379930 NA non-coding downstream 81845 682502 ~ 682829 (-)
G379933 NA non-coding downstream 85065 678439 ~ 679609 (-)
G380097 NA non-coding downstream 118563 645288 ~ 646111 (-)
G380071 NA non-coding downstream 159103 605221 ~ 605571 (-)
G380142 NA non-coding upstream 243 766019 ~ 766325 (-)
G380144 NA non-coding upstream 2706 768482 ~ 768709 (-)
G380147 NA non-coding upstream 7429 773205 ~ 773517 (-)
G380177 NA non-coding upstream 128444 894220 ~ 898517 (-)
G380185 NA non-coding upstream 165674 931450 ~ 931696 (-)
CI01000189_02961166_02963382 NA other upstream 2193332 2960570 ~ 2963454 (-)
G381317 NA other upstream 2233097 2998873 ~ 3006444 (-)
G382060 NA other upstream 3064851 3830627 ~ 3832613 (-)
G382052 NA other upstream 3119786 3885562 ~ 3892909 (-)
CI01000189_00506407_00508897 NA coding downstream 244360 506355 ~ 508897 (-)

Expression


Co-expression Network