CI01000189_02469062_02471153


Basic Information

Item Value
gene id CI01000189_02469062_02471153
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 2468614 ~ 2471153 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000189_02469062_02471153.mRNA
AATGAATTTATCAAAGGCCCAAGTTAATAGCGAAGATAAGTACGCCAAATGCGGCGCTTGGAGAACACAACAGCAATACGACATCGAGGCCAGTCACATGCGTGATGCACATGCTCTATATAACCAAAGGTCATTTATGGTTATTACTTTAGAGGTTATGGAAGGGGACCCTCGAATGTATTACATGGATTGGATTTGGGACAGGTTAGTCTGGGTCAAACCAATTAGGCTCCATTCTCATGCAAGAGTCTTTTCCGCTCTAAGCCAATCAGGATCACGTTACTGGCATAGTCGGAGCTTGTGGCTCTCAATAGACAGGCCTGCCAGGCACTACCGTGTCACGCCATGGGCCCGAAGCAAAGCATGCTGGGAGCTGGAGGGCATGGCTTTCACCCTGAACATCCATATTGGTCACAGCACAGTTTGAAATCTTGCCTTTATTCATTTTGAGGTGCTAGATGTGCGTCACTGGTGTTTATTCAGGGATGAGTGCGTTACATTAGAAAATTCCATTTTTCTAATGATTTTCCTGCAATGCAAGGCATAAACTTGTCAAACACATTTACACACATGCCAAACAGAGCAGGATGTTTTACTAGCAGCTGTATCAGAGGATTTGAGGTCAGTCACGCATAGGTTCACACACATGTACTCATGTAGTCATACAACAATGGTCATCAAACCGGTACTGTCACGCATGTACACATGCATAGACACATACGATACACAAACACACACACTATTTACAGTACAGTTATCAGTTATGCCAGCATAAGATTCATGGGAAAAAACATACATTAATACAAAAGGGCACCGGGTTTGTTGGGAACTAGGAGAACTTTGAACGCTCGTGGAAGTCTGCTCTGAAAAATAAA

Function

NR:

description
estrogen-related receptor gamma isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000189_02469062_02471153.mRNA True 875 mRNA 0.44 3 2468614 2471153

Neighbor

gene id symbol gene type direction distance location
CI01000189_02450025_02461432 NA coding downstream 7115 2449828 ~ 2461499 (-)
CI01000189_02404459_02433659 ESRRG, ESRRGA coding downstream 34955 2404459 ~ 2433659 (-)
CI01000189_02383475_02386489 NA coding downstream 81491 2382566 ~ 2387123 (-)
CI01000189_02167284_02313164 USH2A coding downstream 155450 2167284 ~ 2313164 (-)
CI01000189_02112135_02130703 TECPR2 coding downstream 337339 2111138 ~ 2131275 (-)
CI01000189_02663877_02665709 NA coding upstream 191936 2663089 ~ 2665790 (-)
CI01000189_02686987_02689446 NA coding upstream 214888 2686041 ~ 2689635 (-)
CI01000189_02823407_02846026 ITSN2, ITSN2B coding upstream 352254 2823407 ~ 2846026 (-)
CI01000189_02924018_02946613 SH3YL1 coding upstream 452148 2923301 ~ 2946613 (-)
CI01000189_02961166_02963382 NA coding upstream 489417 2960570 ~ 2963454 (-)
G380882 NA non-coding downstream 274100 2194257 ~ 2194514 (-)
G380863 NA non-coding downstream 316529 2149956 ~ 2152085 (-)
G380803 NA non-coding downstream 360327 2107024 ~ 2108287 (-)
G380572 NA non-coding downstream 658385 1809958 ~ 1810229 (-)
G380535 NA non-coding downstream 725797 1733475 ~ 1742817 (-)
G381033 NA non-coding upstream 133759 2604912 ~ 2605202 (-)
G381035 NA non-coding upstream 141475 2612628 ~ 2612875 (-)
G381047 NA non-coding upstream 179824 2650977 ~ 2651299 (-)
G381184 NA non-coding upstream 245143 2716296 ~ 2716501 (-)
G381185 NA non-coding upstream 246207 2717360 ~ 2717845 (-)
G380177 NA other downstream 1570174 894220 ~ 898517 (-)
CI01000189_00764790_00765233 ID3 other downstream 1703237 764674 ~ 765776 (-)
G381317 NA other upstream 527720 2998873 ~ 3006444 (-)
G382060 NA other upstream 1359474 3830627 ~ 3832613 (-)
G382052 NA other upstream 1414409 3885562 ~ 3892909 (-)
G382153 NA other upstream 1674437 4145590 ~ 4146084 (-)

Expression


Co-expression Network