CI01000189_03126316_03126839


Basic Information

Item Value
gene id CI01000189_03126316_03126839
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 3126112 ~ 3126999 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000189_03126316_03126839.mRNA
ATGTTAATATTTAATACATCAAGAATTTTTTTTTTTACAGCAAACATGACTTGCAGGTAAAATTTTGATCATTCGAATTGTATTTAAATGTTTATGAACATTATACAGGGCAAAACCAATCGGAAGCACCAGTGATGCAGAGTCATTTGACTTTGACAGAATGAAACAGGTTAGTTCAGAAAACCATTCAGAATATACTATTATTGTGCAAGAAATGAGGATGGACTGGTCTGCTAACTATTATAAAATCTGTTGTGTCCAAAAGGAGATCTTGGAGGAGGTTGTGCGAGAATTGCAGAAAGTAAAAGAAGAAATCATTGATGCATGTCTGCAATGGTACGGAAAATTCAGTTGCAGAAATGTTGTGCAGAAACAAGGAATTACTGAGAAGGACAAGGGAAAGCTGAGAAACAGAAGGAATTGGAGTGATGGATTGAGTGAGTGTGTGTATGGATGAGCAGATGGAAATATAGACCTTCACACTGAATTTTCTATTTCCTCCAGTATGAACGTTGAGACAGTCCACTGTGCAGCTTGCTGCTCTCGCTCTTTCAAGTCTTAAAGTCAACAAGTTGGAAATTAATGAAGATATTTTTGTTTTCTAAGTTTATATTGTTTCATCGGTCATTGTTATTATTGTTAAGAATTGTATTATATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000189_03126316_03126839.mRNA True 661 mRNA 0.34 2 3126112 3126999

Neighbor

gene id symbol gene type direction distance location
CI01000189_03114741_03118058 YY1A coding downstream 8054 3113951 ~ 3118058 (-)
CI01000189_03097932_03102218 GDF7 coding downstream 23297 3097682 ~ 3102815 (-)
CI01000189_02986636_02986941 NA coding downstream 139171 2986548 ~ 2986941 (-)
CI01000189_02961166_02963382 NA coding downstream 162730 2960570 ~ 2963454 (-)
CI01000189_02924018_02946613 SH3YL1 coding downstream 179499 2923301 ~ 2946613 (-)
CI01000189_03130245_03141782 NA coding upstream 2424 3129423 ~ 3141782 (-)
CI01000189_03165381_03189571 EML1 coding upstream 37467 3164466 ~ 3189571 (-)
CI01000189_03231665_03237461 PKDCCB coding upstream 103791 3230790 ~ 3239196 (-)
CI01000189_03255223_03258558 RPUSD2 coding upstream 127943 3254942 ~ 3258558 (-)
CI01000189_03259755_03261745 PCMTL, PIMT coding upstream 132358 3259357 ~ 3261745 (-)
G381902 NA non-coding downstream 32677 3093137 ~ 3093435 (-)
G381887 NA non-coding downstream 33799 3090800 ~ 3092313 (-)
G381901 NA non-coding downstream 36056 3089625 ~ 3090056 (-)
G381886 NA non-coding downstream 37558 3088365 ~ 3088554 (-)
G381253 NA non-coding downstream 304154 2821669 ~ 2821958 (-)
G381914 NA non-coding upstream 114282 3241281 ~ 3241515 (-)
G381918 NA non-coding upstream 136755 3263754 ~ 3264236 (-)
G381931 NA non-coding upstream 232840 3359839 ~ 3360241 (-)
G381855 NA non-coding upstream 238315 3365314 ~ 3366132 (-)
G381951 NA non-coding upstream 347225 3474224 ~ 3474437 (-)
G381317 NA other downstream 119668 2998873 ~ 3006444 (-)
G380177 NA other downstream 2227672 894220 ~ 898517 (-)
CI01000189_00764790_00765233 ID3 other downstream 2360735 764674 ~ 765776 (-)
G382060 NA other upstream 703628 3830627 ~ 3832613 (-)
G382052 NA other upstream 758563 3885562 ~ 3892909 (-)
G382153 NA other upstream 1018591 4145590 ~ 4146084 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location