CI01000189_03494191_03495519


Basic Information

Item Value
gene id CI01000189_03494191_03495519
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 3493646 ~ 3495519 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000189_03494191_03495519.mRNA
GTCTGAAATCTTGTATGTTATGAATCCCTGGGACCCCATTACTTACACAGTGACACCTGCTGCTAAGATTTTAGCAAGATGTGTAACATCAGGCACCATGACACAGACTAATTTAGATTTAGAGCTGCTGAGGCTGGAAAGAGACGGTGCAGACGTCACTCACAGTCATTACCTCAGTCAAAGGTTTGCTTCCTTGCAACAGTTTACTTCCCACCTTCAGGAAGTGTTGCGAGAACAGACAGTCCTGCGAGAGAGACTTACAAAGCCACTGTGTCAGCAGAACCTGCCCATTCCGGCTGATCTTCACAGATATGTGGTAGAGCTCATGGGGATGGTGGTGGAGTTTATTCAGAACTTGGAAGTGAAAATTAAGATGGTTCGAGCAATTCCAAACACTGAAAGTTATCTGAGTAATCTGAACAATGGCAGAACTCAACTGCTCGCTCAGGTCACTGAGGTCGAGAACCTGTACAAGCAAGTTCTTAAGCGACGAGGACATTCACAGACACGTCTATTTGATAAAGATTTTCAGAATGAAAATCGCTCACTGTTTGTTCAGGATACTAGTGGACAGTAAAATGATAAAATGAACTAATTACAAAATCATTGACTAGATTTAGTATACATTTTTACATTTGTATTTTCTGTATACATCTAACTATAAGCTTTCATATTTTGTTTAATATTGTCTGTATTCCGTGTACCTAGTGGTTGGTGACAAGGAACTTCGATACATTAGAGAGAACAGATTTATGGAGTATATTCTGCGGCAGTATGTAAATTTTCAGGCACGTTTCATTTTTTGTAAGATTTTCTTTTATAATAATAATAAATAAATGTTCCACATTTCAGACCAAAACCGGAGGGTTTCATTGCTGGTAACCAGCATCATGTATTATATTATTTGTGTGCTACATATACTCTTCCTTTTTTTTTTCTATCAGTGTAAAATTAGTGAACTGCTGGATACCTGATCCATCAAAGCATTTCTGGACATTTGTAGTGGCTTGCTTAGACATCAGTGACTGCAATGGATGATTTGTAAGTGGAACAACTCAAAAGATTTGATTTAGTGTTCAGGCTTTTTAATATTTTATATAATAGGACAAATGAAACAATAAA

Function

NR:

description
Si:dkey-170l10.1 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000189_03494191_03495519.mRNA True 1122 mRNA 0.38 5 3493646 3495519

Neighbor

gene id symbol gene type direction distance location
CI01000189_03455342_03475831 RPAP1 coding downstream 17815 3455231 ~ 3475831 (-)
CI01000189_03367583_03403144 LTK coding downstream 90502 3366785 ~ 3403144 (-)
CI01000189_03335757_03343285 IVD coding downstream 150361 3335373 ~ 3343285 (-)
CI01000189_03294767_03307517 BAHD1 coding downstream 185791 3294349 ~ 3307855 (-)
CI01000189_03259755_03261745 PCMTL, PIMT coding downstream 231901 3259357 ~ 3261745 (-)
CI01000189_03506782_03513494 ZNF839 coding upstream 11263 3506782 ~ 3513494 (-)
CI01000189_03517928_03524647 VSX2 coding upstream 21764 3517283 ~ 3524712 (-)
CI01000189_03546199_03556875 NA coding upstream 50680 3546199 ~ 3556875 (-)
CI01000189_03557950_03558676 DTD2 coding upstream 62289 3557808 ~ 3558676 (-)
CI01000189_03608917_03613975 FAM175B coding upstream 112716 3608235 ~ 3613975 (-)
G381961 NA non-coding downstream 3016 3490418 ~ 3490630 (-)
G381951 NA non-coding downstream 19209 3474224 ~ 3474437 (-)
G381855 NA non-coding downstream 127514 3365314 ~ 3366132 (-)
G381931 NA non-coding downstream 133405 3359839 ~ 3360241 (-)
G381918 NA non-coding downstream 229410 3263754 ~ 3264236 (-)
G381867 NA non-coding upstream 7099 3502618 ~ 3503965 (-)
G381998 NA non-coding upstream 125355 3620874 ~ 3621089 (-)
G382003 NA non-coding upstream 143210 3638729 ~ 3687279 (-)
G381978 NA non-coding upstream 201367 3696886 ~ 3697697 (-)
G382036 NA non-coding upstream 216708 3712227 ~ 3712452 (-)
G381317 NA other downstream 487202 2998873 ~ 3006444 (-)
CI01000189_02961166_02963382 NA other downstream 530192 2960570 ~ 2963454 (-)
G380177 NA other downstream 2595206 894220 ~ 898517 (-)
CI01000189_00764790_00765233 ID3 other downstream 2728269 764674 ~ 765776 (-)
G382060 NA other upstream 335108 3830627 ~ 3832613 (-)
G382052 NA other upstream 390043 3885562 ~ 3892909 (-)
G382153 NA other upstream 650071 4145590 ~ 4146084 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location