CI01000189_03699588_03706531 (CDK1)


Basic Information

Item Value
gene id CI01000189_03699588_03706531
gene name CDK1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000189
NCBI id null
chromosome length 4726117
location 3699248 ~ 3706834 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000189_03699588_03706531.mRNA
ACAAAATTATGACTCGTCAGAAATTTCACTGTATGTTATGATTATATTCGTGATGTCAATGCTAACAGTTGTAATGAAAGTTCAGAAATGTGTTCAGTCAGTCGTTTACCTCATGTTTATGTATATAAATACATACATTAGATACTGTATTAAAATAAGTGACAAGTTTGTCTGCCACACTATCTTTTTAAGGCGAGTTCTTTTTGGTATAGAGTAACCAGTAGAGTAATTGCACATGTTATGCTGTCATAAATTGACTTTTTTCAATCCTTTGTGTTTCCTCAGAAAGAGTGTTGAGGAAAAATGGATGACTATCTTAAGATAGAGAAAATTGGTGAAGGTACGTATGGTGTGGTATATAAGGGCAGGAATAAAACCACAGGACAGGTGGTGGCTATGAAGAAGATCCGCCTTGAGAGTGAGGAGGAGGGGGTGCCCAGCACTGCTGTCAGAGAAATCTCTCTCCTCAAGGAGCTTCAGCATCCAAATGTTAGTTACCTGTATCAGATCCTCGAGGGGATTCTGTTTTGCCACTGTCGCAGAGTTCTGCATCGTGACCTAAAGCCCCAGAACCTGCTGATTGATAATAAAGGTGTAATTAAGCTTGCAGACTTTGGGCTCGCACGTGCCTTTGGAGTCCCGGTCAGAGTGTACACACATGAGGTGGTAACTCTGTGGTACAGAGCTCCTGAAGTCTTGCTGGGGGCCTCACGTTATTCCACACCTGTAGACGTCTGGAGTATTGGTACCATCTTTGCTGAACTTGCCACCAAGAAACCACTCTTCCATGGAGACTCAGAAATAGACCAGCTTTTCAGGATCTTTAGGACTCTGGGAACCCCTAACAATGAGGTCTGGCCAGAAGTTGAGTCACTACCAGATTATAAGAATACCTTCCCAAAGTGGAAATCTGGGAATCTGGCCAACACAGTGAAAAACCTAGACAAGAATGGAATTGACCTGCTCACGAAAATGCTGATTTATGACCCTCCTAAGAGGATTTCAGCACGGCAAGCGATGACACACCCGTATTTTGATGATTTGGATAAGAGCAGTCTTCCAGCCAATAACCTCAAGATATAGACACCTCAGATCTTATACCCCTTTCTATGCACACGTACACATCCATACTAAAGCAATGTGAGCTTAGGGGTCATAATGAATCTGACTCTAGACTTCTGGGAGTACAGAATGTCTGGAGATGTAGATTTACTACTCCAATCTGCAGTAATGCAATCTTTCGACATGCAATAATTAACCTTAAGTTTGTTCGTTTGTTTATTGGGTGGTTTTTCTACTTTTGTTTGTCAGTTTTTGTATGTCTTTTTCCTATCCTGTTTTATATGTTGCATAAAACACCCGTTTGTAAATAAAACTAATATTTTTTTTTTTTTTTGGACCTGAAACATATTACAATAATAAA

Function

symbol description
cdk1 Predicted to enable RNA polymerase II CTD heptapeptide repeat kinase activity and cyclin-dependent protein serine/threonine kinase activity. Acts upstream of or within regulation of mitotic cell cycle, embryonic. Predicted to be active in nucleus. Is expressed in eye. Human ortholog(s) of this gene implicated in breast cancer; cervical cancer; and urinary bladder cancer. Orthologous to human CDK1 (cyclin dependent kinase 1).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process

KEGG:

id description
K02087 CDK1, CDC2; cyclin-dependent kinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000189_03699588_03706531.mRNA True 1423 mRNA 0.40 6 3699248 3706834

Neighbor

gene id symbol gene type direction distance location
CI01000189_03608917_03613975 FAM175B coding downstream 85273 3608235 ~ 3613975 (-)
CI01000189_03557950_03558676 DTD2 coding downstream 140572 3557808 ~ 3558676 (-)
CI01000189_03546199_03556875 NA coding downstream 142373 3546199 ~ 3556875 (-)
CI01000189_03517928_03524647 VSX2 coding downstream 174536 3517283 ~ 3524712 (-)
CI01000189_03506782_03513494 ZNF839 coding downstream 185754 3506782 ~ 3513494 (-)
CI01000189_03903426_03904603 NPY4R coding upstream 196100 3902934 ~ 3904603 (-)
CI01000189_03950993_03958722 NA coding upstream 243339 3950173 ~ 3958722 (-)
CI01000189_03980640_03981210 NA coding upstream 273779 3980613 ~ 3981210 (-)
CI01000189_03983572_04013988 LARP1B coding upstream 275532 3982366 ~ 4014133 (-)
CI01000189_04017195_04030340 NRDE2 coding upstream 310187 4017021 ~ 4030340 (-)
G381978 NA non-coding downstream 1551 3696886 ~ 3697697 (-)
G382003 NA non-coding downstream 11969 3638729 ~ 3687279 (-)
G381998 NA non-coding downstream 78159 3620874 ~ 3621089 (-)
G381867 NA non-coding downstream 195283 3502618 ~ 3503965 (-)
G381961 NA non-coding downstream 208618 3490418 ~ 3490630 (-)
G382036 NA non-coding upstream 5393 3712227 ~ 3712452 (-)
G382093 NA non-coding upstream 44888 3751722 ~ 3752001 (-)
G382094 NA non-coding upstream 48884 3755718 ~ 3755924 (-)
G382051 NA non-coding upstream 192657 3899491 ~ 4044999 (-)
G382044 NA non-coding upstream 258742 3965576 ~ 3976937 (-)
G381317 NA other downstream 692804 2998873 ~ 3006444 (-)
CI01000189_02961166_02963382 NA other downstream 735794 2960570 ~ 2963454 (-)
G380177 NA other downstream 2800808 894220 ~ 898517 (-)
CI01000189_00764790_00765233 ID3 other downstream 2933871 764674 ~ 765776 (-)
G382060 NA other upstream 123793 3830627 ~ 3832613 (-)
G382052 NA other upstream 178728 3885562 ~ 3892909 (-)
G382153 NA other upstream 438756 4145590 ~ 4146084 (-)

Expression


Co-expression Network