CI01000192_00345708_00354498


Basic Information

Item Value
gene id CI01000192_00345708_00354498
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000192
NCBI id null
chromosome length 382550
location 345263 ~ 356428 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000192_00345708_00354498.mRNA
AGAATCTGTAGTTTTGCACTGTATTAAACCATTTAAAGTGATTATATTTGGTTTTGCCTCCTTTGAAATGTATTCTAACGCATGTTTATTAATGAATTTCCTTCTCTTCATGCAGATAGATTGAGGAATGACCAAACCTGGAATGCGAATGCATCTTACAGGAAGCAGAGAAGAAAATTTATGTATTTTCTACCATCCGCTGACATGCAGCACCTGCAAACCTTATCAAATTTTCCAACACTGCATGTGACAAATCCCGAAACTGGCCAATGCTACTTGACAACTAAACAATATTTTGGGCCCTGTTGCCTCCCAATAATCAGACTGAAGAGTATTCAGTCTGTGTAATATATTTTCTTTTCATTCAAACAAACATGTTTGTACATGTTTCATTATCAGTGTTATATAGATATATATTTTTTGTTTTATTAAAAAATAAATTATAATAAACCATGTTGACTTATGTTTTTTGTGGCCAGAACATATGTGACGCTGGACCACAAAACCAGTCATTGTGTGGGTCAAAATGATCGATTCTTCTTTTATGCCAAAAATCATTAGGATATTAAGTAAAGATCATGTTCCATGAAGATATTTTGTAAATTTCCTACCGTAAATATATCAAAAATGTATTTTTGTGAGTGGATATGCATTGCTAAGGACTTCATTTGTCCAACTTTAAAGGCATTTTTCTCAATATTTTTTTTTTTTTTGCACCCTCAGATTCCAGATTTTCAAATAGTTGTATCTCAGCCAAATACTGTCCTATCCTTTCAAAGAATTGACCCTTATTACTGGTTTTGTGGTCCAGGGTCACAAAAATATACAAAGAACAGCTAACTGTTATATGGATACAACTAACTTAGCTATCGGATACACAAAGCATTCAATAGTGCATCAAATAATCCATATTTAAAGGAACAAAATAGTGAAAAAGCATTTCTGTAGCTCATCCGACACAAAGGTCATGAGCTCGATTGATAAAAATGTATTGAATGCAAGTTGCTTTGCTAAATGCATAAATGGAAATGGAAAAAGATGAACAGAAAAAGTAAATTAAATAAAAGCTGAATTCAGCTGATGCAAATATGAAGCTTTTTTATCTTCATTTATTTAGGCTACTTTTAGCCTACTGTTTACTTTGAGACCAACTTACTATGAACTTTCCACAAGGGGGCGCATGGAGGTCCATAAGGCCAAATCCTCAGAAAAGTAACTGCTTCTTTGGCGCTGAACAATGAATTAAAAGCGAATAATGACAATTGAGAAGGTTTAATAGCTATTAAATTAAATACGAAGTAGCTATTTGAACTAAAGGAATTATTATTTAAACTAACCCCGCCCATTTTATCACCCTCGTTTAAAGCAAACTGCCATCTATCGACTTCAATTTCTACTGTTTTCCACGCACGTGACGTCATCAGAGCGCATGCGCAGTAGAGTGTCTGCCCAGCGCTTCCTAAACACAAACGGATTCAAACTCTTGCGGGTAACGTTTCTGTTTATACACTATTATTTCTGGGTATTATTTGAATTGGGTTAGAGTTAGGGTTAGGATTCAGTTTTCTCTACGTACGCTAGTACTTATCGCTGTTTTTTCGTATTTAATTAGGTACATTTTGGCGAAGCGTAAACATTCAGCGATGAACCTCAAAACACATATAATCTGTTAGTTTAAGCTTGTTAACAGGATTATAATATTTAACAATTAATAATGAATGCAATTACTGATTACACTAACAAAAAAAATACCATGGTATTACCATTTACCATGGTGTTTTTAAAGCTCATTTGAATATTAAGGTATAGAAATATAGTAATCGTTCAGTAACATGCTACATATCAAAGTACTATGCTTAAACCATAATTTTACCTTACCTTTCCCCACCCATCAGATGCTGATTGACAGCTGTCAGATGCTGATGACCTCATGGCATCGTCCTCTGAGGTGAACGTACACATGGAGGAGGTGGTGGTGGTTACGACCCCAGACACCACAGGTCAGACTTCATCCAGCGATGAGGAGAAGAATATACTGGTGGCTACAGACCTGGAACAGTCTGGGGAAAACATTATGGAGCAATCCATGGAGTCTGAGGCCGAGGCTGAGTCGAGCACCACTATCTCTCTGCCCAAGGACACTGTGTTGGTGAAAATATCTGACGATACAGATGTAGAGGGTGATATTCTCTACCCAATAACCTGTGGGGACAGCAAAGCTAACCTTGTGTGGAAGAAGTTTGTGTGTCCCGGGATCAACATCAAATGTGTGCAGCTGAACGAACATCTCATCAGTCCGAAGGAGTTTGTGTACATAGCGGGAAAGTCTACGCTGAAGGACTGGAAGAGAGCCATTCGCCTCAATGGAACCATGTTGAGGAAGATCATGGATTCAGGTGAGCTGGACTTTTATCAGCACTCCAGACTGTGTTCAAACACCTGCCGCAGTACCAAGATTGACCTGGTGGGGTCACGGGTGTCTCTCAGCAGCCAGCAGTCCACGGAAACGGCTCCTGCAACCCCCGCCTCTGTGGACGTGAATGGATCTGCAGCTTCGTTTTCCACTGATGGTGACGACAGCACCGAATGGGTCACAGCTATAGGAGAGGACACCATGATGTTCTGGAGAGGACTGAGGGATGCTGGGCTGTTGGAGGAAGTCATGGAGGACCTGGAGAGACAGATCCAGGAGATTCTCAAGGGCCTGGAGGAGCGAATCCAAGACCCACCACTGCAGGTCAAAGATGCCGCTCTGCTCAATAATATAGTCCAGAACTTTGGGATGTTGGACCTGGTGAAGAAAGTTCTTTCCAGTCACAAAAGCCAGATGGACCGCTGTAGGGAGCAGTACACGCGCAGCTTAGTGGCCCTGGAGCAACAGTGTGACGAGCATCGCAAACGTGCCAAAGAACTGAAGAGCAAATCGCAGCACCTCAACAACGTCCTGATGACCTTGACCCCCGTGACCTCGCCTCCCACCGCCAAGCGCCCTCGTCTGACCCGTGCCGTTTCGGGCCCTGCCACTGTGGCCGCAACACCCGCCCAGTCCACGCACTTCACCCTGCCCATCACCCAGCTCACCGGCATCCCGCTGGACAAAGTCCTGTCGGCTCAGACTCAGTCTCCACTGATCGGCGGATACACAGTGCTCACGTCACCGGGGGGGACCGAACTCCATCCTGAAGGCTCTAATCTGACCGTGCTGAGCACTGGTGGCGTTCCACAGGGGTCCTCGGGACCCACGTTCGTCAAAGTGGTCAGTCCGTTTCAGCTGGTCACGTTGCCCACAGTGGGAGCTGGAGCCACGTTGCAGAACCTGGCAGCACCAGCTGCGGGCAACACTGTAGTTGCGGTGCCCGTAAGCACGGTTAGTGCTGTCAGTAGCATAAACACTGCCGTCGTTGAGACCGTTGGGCCACAAGCAGAAGCGGCTACAGAACAGAGAGATGACCAGAAGGAGTGAAACTCTCCTGAAACCCAGGAAATAGTTGCGTAACGTCAGTGTATCATATACTTTGTATTTGGAGGATGAACTTTTTTGCAGTTTTATGAGGAATTTGCAACTTTTTTGCAAAACGGCCATGGTTTGGTGATGAAAGTCTTTTGTTGTTATTGCATTTGATTTAATTGTAATCTGATTACAATGTGGTGAAATACAGTTTAAGGACATTTTATACAAAACATAAGGCACATTTTGTCCTTAAAATTTTGTGATTGACCAGTGTGTATAATTTGTAGTTATAATGTGTTTTGGATGTAACGCTCACTTCCTTATTTATACTGTTCACATCATTTTTCCATATTGATGTCTTCCATATTAAGTACTTCATTACAATGGTATCTGTACTTGACCCGTCATTGATTACTTAAAATTGATCAACTCAGACCATCTTGTCTTTCATAATAAA

Function

GO:

id name namespace
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000192_00345708_00354498.mRNA False 3908 mRNA 0.42 9 345263 356428

Neighbor

gene id symbol gene type direction distance location
CI01000192_00315657_00323729 STK35 coding downstream 20074 315573 ~ 325189 (-)
CI01000192_00252038_00254509 NA coding downstream 90754 250552 ~ 254509 (-)
CI01000192_00169090_00206672 SCUBE3 coding downstream 138591 168969 ~ 206672 (-)
CI01000192_00124135_00167418 SCUBE3 coding downstream 177434 123577 ~ 167829 (-)
CI01000192_00116033_00116872 NA coding downstream 228391 115839 ~ 116872 (-)
G384331 NA non-coding downstream 18272 326647 ~ 326991 (-)
G384329 NA non-coding downstream 19564 325475 ~ 325699 (-)
G384286 NA non-coding downstream 30820 312318 ~ 314443 (-)
G384279 NA non-coding downstream 57481 286252 ~ 287782 (-)
G384285 NA non-coding downstream 123503 121263 ~ 221760 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location