G387848


Basic Information

Item Value
gene id G387848
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000201
NCBI id null
chromosome length 704500
location 489405 ~ 489702 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU443923
CTTTAGACACATTCCAGGATCAGTCGTTCGCTGGACCTGGTGTCAATAAAAGCTTTTATTGGACTAACAAAGAAGTTTTCAGTTCTGAAATTTACAGGATATTCTTATAGTATGATGACCTCCTATATATCAAAAGCTCAAGGAAAAGTTGATTTCTCAAAGTTCCATGAACGATGTGTAAGTAATATTTTTGTGCTAACATTCTGAGAGCATTATTAAATAACAAACATTCTAATAACGTTACTGGAAGAATGTTTGTTCATAACATTGAGAGAACCTTGCCAGAACATTCTGAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU443923 True 298 lncRNA 0.34 1 489405 489702

Neighbor

gene id symbol gene type direction distance location
CI01000201_00473896_00474283 NA coding upstream 14969 473896 ~ 474436 (+)
CI01000201_00421647_00426906 TBL1X coding upstream 62499 420586 ~ 426906 (+)
CI01000201_00394321_00396791 NA coding upstream 92410 394152 ~ 396995 (+)
CI01000201_00254354_00285896 NA coding upstream 203343 254115 ~ 286062 (+)
CI01000201_00124616_00139299 NA coding upstream 349878 124616 ~ 139527 (+)
CI01000201_00547876_00556142 GPM6BB, GPM6B coding downstream 58174 547876 ~ 556255 (+)
CI01000201_00572895_00575129 TRAPPC2 coding downstream 83017 572719 ~ 575704 (+)
CI01000201_00576577_00577506 NA coding downstream 86875 576577 ~ 578901 (+)
G387838 NA non-coding upstream 82960 406213 ~ 406445 (+)
G387807 NA non-coding upstream 104303 340187 ~ 385102 (+)
G387804 NA non-coding upstream 134755 322822 ~ 354650 (+)
G387741 NA non-coding upstream 200873 240952 ~ 288532 (+)
G387739 NA non-coding upstream 220613 234891 ~ 268792 (+)
G387849 NA non-coding downstream 9084 498786 ~ 527371 (+)
G387819 NA non-coding downstream 33207 522909 ~ 613385 (+)
G387862 NA non-coding downstream 98763 588465 ~ 589474 (+)
G387827 NA non-coding downstream 125229 614931 ~ 616868 (+)
G387876 NA non-coding downstream 134073 623775 ~ 623986 (+)

Expression


Co-expression Network