G388658


Basic Information

Item Value
gene id G388658
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000203
NCBI id null
chromosome length 933177
location 828211 ~ 831261 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU444913
TCCGACTTGATAACTCGCAATTCCAACTTGATAACTCGCAATTCCGACTTTATTATCTCGCAACTCCGACTTGATAACTCACAATTCCAACTTGATAACTCTCAATTCCGACTTTATATCTCGCAATTCCAACTTGATAACTCACAATTCCAACTTGATAACTCGCAATTCCAACTTTATTATCTCGCAATTCCGACTTTATTATCTCGCAATTCCGACTTGATAACTCGCAATTCCAACTTGATTACTCACAATTCCAACTTGATAACTCGCAATTCTGACTTCTTTGTTATGAAATAGCGATTGCGAGATGAATCTAATCTGTCACACTTGGGTAAAAAGTCTAGTGGAAAACATCCAACAGAACTTTTTGTATAGAAAAAGCATTAAATCCGTGAAATATTGATATATTATTTATTGTTTAGGTCAGATTTCGCCTGAACGCTCACTATCTGCTTTTACTGCATAGAAAAGTGCAGCGTGAACGTTCGGCTAAACAACTTCTTTTGTGTTTCACAGAAGAAAGAAAGTCTATGGTTTTGGAATGACACAAGAGTGAGTAAATGATTACAGATCATTTTTAATGAATGAGTACAGAAAAAATATTTTCTGTTTTCCCACTTACATGTGTTTAAAACATCTTCTGAAAGAGTTGAAGAATCATAAAACTGCTTGTCAACACGTATAATTGCCTTCACTAGAAAAACAGCTGAGAAAGAGTCTGAGCGGCTGTGATTTTCGTCTCTTTCTCCCTCTGTGATTCCTGTGCTTTTTAAAATAGGGTCCAAATCATAGTAATCATAGACGTGGAGCAATTATGAAACTTTCTGTAAGTACGATATAATCCCTTATCATTATTTTAAATATAGCTGCTGAATGCTGGCCTGCGAGTGGAGTCATTACATCCAGTATCACATCTCACAGGCTATATTTACACTGCGGCTGACGTGACCGACAAAGGCACATATTGTTTCTCCGACACCAACATCTATTTCAACCCAATCTGTTAGATGAGAACACTCTTCTGACGAGAGAAAAATAAGATTAGCAGCAGCAGTGGACAGAAGGACACTGCAAAGTTCTAGGAAAACTATATAAACATCCTTACACAAAAAATGTCTAAGATAAGTACGAAAGCTCGTTTCCACATCGGAATAAAAAATTTAAAAAGGTAATTGCGACTTTTTATCTCACAAATCTAACTTTTTTTCCTCTCAAAACTCTCAGAATTGTGAGAAATAAACTTGGAAATGTGAGAAATAAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU444913 True 1266 lncRNA 0.36 2 828211 831261

Neighbor

gene id symbol gene type direction distance location
CI01000203_00785171_00795571 NA coding downstream 32337 784795 ~ 795874 (-)
CI01000203_00751604_00767282 NA coding downstream 60878 750225 ~ 767333 (-)
CI01000203_00688736_00692413 NA coding downstream 135120 688012 ~ 693091 (-)
CI01000203_00612664_00618559 NA coding downstream 209379 612573 ~ 618832 (-)
CI01000203_00599048_00599578 NA coding downstream 228250 598954 ~ 599961 (-)
CI01000203_00868664_00881343 BMPR1BB, BMPR1B coding upstream 36871 868132 ~ 881343 (-)
CI01000203_00929195_00932784 NA coding upstream 97802 929063 ~ 932784 (-)
G388606 NA non-coding downstream 191 677074 ~ 828020 (-)
G388656 NA non-coding downstream 92566 730700 ~ 735645 (-)
G388578 NA non-coding downstream 125707 630412 ~ 702504 (-)
CI01000203_00483836_00497619 RFX3 non-coding downstream 319740 483719 ~ 497814 (-)
G388608 NA non-coding upstream 20218 851479 ~ 864003 (-)
G388610 NA non-coding upstream 26835 858096 ~ 920213 (-)
G388686 NA non-coding upstream 37966 869227 ~ 873848 (-)
CI01000203_00294049_00335783 AKT2, AKT2L other downstream 511605 293775 ~ 335783 (-)
CI01000203_00287087_00290157 NHLRC3 other downstream 540881 285712 ~ 290157 (-)
G388454 NA other downstream 609286 216789 ~ 218925 (-)
G388477 NA other downstream 655947 171163 ~ 172264 (-)

Expression


Co-expression Network