XLOC_012129 (fam167b)


Basic Information

Item Value
gene id XLOC_012129
gene name fam167b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 25392524 ~ 25397558 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023910
GAGATTAATGACCGGAGTGCGCACATGATCATGCGCAGCGCACATGTCTGAGCAGCACAGAGATGGAGTTCAGAGAACTGGGAGCGGATGAGGGCTCTGAGGGAGATACGGAGGATCTGGATAGTGTCAAAGCCCTGACCGAGAAACTCAAACTCCAGACACGCAGACCGTCCTACCTGGAGTGGAAGGAGCGACTGCAGTCTCAGCCGTGGACTGATGGAGCTGCGCACGGTTCAAATGTCGGCAGCCCGGGCTCTGTGGAGAAGGACAGCCAAATGTCAGACATCTGGAAAGATGGCATGCCTTATAAGAACATATGTGGATTTGACACTATAGACGACGCGTTAGAGTGGCTCAGAAGCGAACTGAGGGAGATGCAGATGCAGGATAACCGTCTGGCGCGCCAGTTGATCCGCTTACGAGTGGAGATCCACAGGCTTAAGGTGGAGCAGGTGTGCCACCGCCACAAAGAGATGCTGGATGACGCCACGTATGAGCTGGAGGAGTGTGAGGAAGACTCAGACCTACTGTGTGACATCCCCATGAAAGCCGCCTTCACTCTTTCCACACCTCTCAAACATCTGGGTCTCACCAAGATGAACCTCAACTCCAGACGATTCTCACTCTGTTGAAAGATGAGGTTATGAGAGACTCAACTGAGTACACAACTTTTTATGCAGTGCAGACACTGGAAGCCAATTTTGGTGTTAAATTAGACTATTTTAAACAATATCATGGTAACATTTTTCAATAAGGTCCCATTAGTTATGtattatagggatagttcacccaaaaatgaaaatctcctCACCATTTAGACACACTTGATTGGTTCTAAACTTTCATGACTATCTTTCTTTTAAAACAAGaatgggtgaattatacctttatCTACATTGAACAGCATTAAGGGTGAAAtgctaaaaagtaaaataaaattgtccAACTGA
>TCONS_00023911
TTTTTTCCACTACTTGTGTACACAGAACTGGGAGCGGATGAGGGCTCTGAGGGAGATACGGAGGATCTGGATAGTGTCAAAGCCCTGACCGAGAAACTCAAACTCCAGACACGCAGACCGTCCTACCTGGAGTGGAAGGAGCGACTGCAGTCTCAGCCGTGGACTGATGGAGCTGCGCACGGTTCAAATGTCGGCAGCCCGGGCTCTGTGGAGAAGGACAGCCAAATGTCAGACATCTGGAAAGATGGCATGCCTTATAAGAACATATGTGGATTTGACACTATAGACGACGCGTTAGAGTGGCTCAGAAGCGAACTGAGGGAGATGCAGATGCAGGATAACCGTCTGGCGCGCCAGTTGATCCGCTTACGAGTGGAGATCCACAGGCTTAAGGTGGAGCAGGTGTGCCACCGCCACAAAGAGATGCTGGATGACGCCACGTATGAGCTGGAGGAGTGTGAGGAAGACTCAGACCTACTGTGTGACATCCCCATGAAAGCCGCCTTCACTCTTTCCACACCTCTCAAACATCTGGGTCTCACCAAGATGAACCTCAACTCCAGACGATTCTCACTCTGTTGA

Function

symbol description
fam167b Orthologous to human FAM167B (family with sequence similarity 167 member B).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131121-390 Orthologous to human FAM167B (family with sequence similarity 167 member B).

Ensembl:

ensembl_id ENSDARG00000100426

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023910 False 950 mRNA 0.46 2 25392524 25395395
TCONS_00023911 True 582 mRNA 0.53 3 25392842 25397558

Neighbor

gene id symbol gene type direction distance location
XLOC_012128 lck coding downstream 10148 25344734 ~ 25382376 (-)
XLOC_012127 zpcx coding downstream 61077 25328351 ~ 25331447 (-)
XLOC_012126 pabpc4 coding downstream 65839 25303671 ~ 25326685 (-)
XLOC_012125 ppie coding downstream 89038 25296982 ~ 25303486 (-)
XLOC_012124 NA coding downstream 145914 25244438 ~ 25246610 (-)
XLOC_012130 NA coding upstream 115366 25512924 ~ 25522751 (-)
XLOC_012131 rtn4ip1 coding upstream 152677 25550235 ~ 25563847 (-)
XLOC_012132 NA coding upstream 187929 25585487 ~ 25586858 (-)
XLOC_012133 si:ch211-214p16.2 coding upstream 190067 25587625 ~ 25588430 (-)
XLOC_012134 rab3gap2 coding upstream 212268 25609826 ~ 25630848 (-)
XLOC_012123 NA non-coding downstream 194923 25188611 ~ 25197601 (-)
XLOC_012107 NA non-coding downstream 1073953 24307366 ~ 24318571 (-)
XLOC_012106 NA non-coding downstream 1090835 24296350 ~ 24301689 (-)
XLOC_012105 NA non-coding downstream 1172842 24203699 ~ 24219682 (-)
XLOC_012140 BX000364.3 non-coding upstream 466747 25864305 ~ 25864419 (-)
XLOC_012141 NA non-coding upstream 495864 25893422 ~ 25897784 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G443481 NA non-coding CI01000312 null 309469 ~ 312107 (+)