XLOC_012164 (im:7136021)


Basic Information

Item Value
gene id XLOC_012164
gene name im:7136021
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 28607417 ~ 28612851 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023978
CAATAAATGACTCTGACTCAGTATTTAAAACTTCAATTTGTCTTTCAGATCTTTCTTGTGATGAGTCTGTTTCTTCAGGCTGTGACGACTGTGGAGGTGAAACGGCGATCACATAAGTCTCCTGGCTGATGTTAGTCTTACGTGATATCTGGATTACAGGGTTTGACTGGTCAACATTACAAATCTCTAGATTTTTTACATGAACAGAAACTGCCTCGTGCCCTGCAGAATTTTGTCTCTGAACTTTTGCTTTCATTCTTGCAAAAATCTTTGCTGGCGTCTCAGTGCCCTTCTTCAGCATCAGGTCAGCTTTGTTTTGAGGCACAACATCCGCCGTGGCGTTGATGCTGCTGAGCTCACAGGGGATATTTGGGCTGTTTTCTTCAGCACTCTGAGCTGTGGAGTTCATCACCAACACATCTCTGTTTGAAAGCTTTCTACCTGACCCAGGTGCCCAACTGCTGGCTATTTTAGGTTTAGTTTTGACTGGTGTGATCATGTCACTAGATTTAGGGACTCCAGGTGCTATGAAATAGTCCTGTAGTGGGTGATACATTGCTTTTGTGTTAGAGAAAAGTGCCTAACCGTTTATAGTCCCTCTGTCATCCTTGTGCTTAACAAAACCCTGTAAGATTCAAACAAAACAGATAATTAGAAAATACATTGAAAAAGTGCACTGATCGTcagtgaaatgtttaaaatacagtCTTTCGTCAGTAAAATAGATTACTTTCAGAAAGAATATCAGTCAGGATTTGTATTAACACAATAAACAGCGTCAgtagtaaaataaaacattataaaacaacaataaaaagtaTTAACACTACTCTAATTCCGATTTCTATGCTTTATTATTTGTTAACTGCTGTAAAACACTAACGTTAAGGTTAAAACGAAAATAAACCCGTTCACGACTAACTCTTGACGAACATAAAACTATCTACACATCAGTTCGTGTAGTAAATGTAACAATATACAGCGTAATGGAAAATAGGACTTATGTTTACAAAATGGACTGCTTACCATAAAACTCGTTTGAATTTTCCCGGATAATGAGCGGCTAACGTCTCGCGTCGCGTAAGGGCTGCGTCATTTCCGCCAGTAATGCTACTAGGAAGTGAGAATGATTCAGTTCAGCGAATCGGTTCTTTTAAATAGCCTGTTACTAAAGAATCATGTTATTCCCTTAGCatacttaatatttatatttaaggcGCTAAAATAGTTCACGAATTTGActctattattataatattttaatgcaaCATTGACTCACAATGCTATCGCACAACCATAACATATAGTTATTAATTCAAATACAGTCAGTGCCCAGTTTCACTCGGTATAAACCATAAGGAGAACATAAACATTAACATTACATTCACGTAAAGTAACACAACATAAACATCAACATTACACTAACATAAAGTAACAACGTGTATAATGCAAAAAGTGAGAGTTATTTAATTCGGTGAATTGGTTCTTGTAGATCGCTTGTTTATAGGTaatattttagtcttttttttattattgattccAAGAAATTGTTTAAAACAGACTACACTAAAagtgaacagttattttacacaatatttacatTAGATATACAGGATAAAGAGCAAAacccaaaataataaacaattataaaaaaaaattatcctgTAAAAAATAACGCTTAACATTTGCATTCTATGACgctaaaattaatttacatcTCACTCGAAATCTTTTCAATGTAACATACATGTTATCACACAACtgcatatacaaaataaacaaaatataaatatggtTATTGTTAATGCAAACACAATCAGTGTGCTGCAGTTTCACTAGGTAACATTGCATAAGTATGATGCAGAAATCTTGGGGTTTCACACAAAATACACCTCAGGAAGGTTTTGGTTCAACTGATTAAATTAAAAGATCCGATTCACCACAACGACTCGTGCAAGCATCGCAAAAACTGAATCAGAAGTTTGCATCGTGCACGTGTGATAGGAATATGGAATTGTAGAGAAAATGCCAAATGTACAGTAAACGAGAAATAAGCGAGCACATGTCGTCGTTTGTTGAGGAGGAAGACGATGTCCTACATTCAGCTGCCGGAGGAGATTTGGATCCACGTGTTTGGATTTCTGTCTGTTCGTGACAAATTGAGTGTTCGTGTGAGCTGCACGTATTTTAAGGGACTGGTCGACCACTGGGCATTATGGAAAGACAGCGTTCTGCTCATCCAAAAGCCTGGAGTCTACGACACACACTTCTGGAAAACTCTTTCCCGGAGGAAAGTCAAGTCTGTAGTTGTTGAAAAGGCAAAGGCGAAAGTCTTGCAGCAGATCGTGCTGTATCTGCCGTGGGTCACCTCAGTGAATCTGCTGGAGTGCAGCGATGACACAGCTCTGGTCACTCTGGCGGCTTTAAAACACCTCGACAGGCTGGTCATCTGCCAGTGTAGCTGTCGGAGTTTGATCAGCTCGCTTTTATCTCTGAGAAATCTGACTCATCTGTGCTTGTGTGGAGTCCAGAGAGCCTCGATAGTGGAGATCAGAAATGTCCTTTCACAACTTACCAATCTTACCTCACTGCACTACCACGATGATAAAAACCCCATCAACAAAACTGCGCTGCATAGCCTTTTAACGCGTTTGAACAACCTAAAACACCTCTCTCTGAAAATGGGACCAAAGTATGGGATCCTGCCTGTTGATTACTTTTGTCCTGCTGGAGCATGTGGACATTCAGCAGGCGAAGAGTCTGTCCTGAACAGCCTGGAACTGCTGAACTATGAAGACTCCTGCCTGTCCCCTGATGCCTTCAGCGCTCTGTCTTCTCTGACCAAACTCTCAGTCCATTATACAAAGTGTATCTTCTGTCCTCTGGCTTGCCCCCTCATAAAATGGTTGGAAGAACTTTGTGTACTCTCAGAGCTTAACATTTCTTATGGATACTCGCTGGAAATGTACGCTGGCTCCATCCCCAGGATTGTGCGTCGTCTGTCCCTCATGGGAGTGAAGGCAGATCTGGCGTCAGTCAGGATCCTGGCTAAACGGCTGCCAGAACTCCTCCACCTTCACCTGGACCTGTGCTGTCATGACATCTCTCACATAATCGCAGAAATGCCACAGATGTTCCCAAAGCTGCAGATCCTAAAAGTGAGACATTATAATGTTCCAGCATCAGTATTCCTCCAGCTTAAGCATCTGCCCCGACTCAGGCAGTTAGTGATTCTGGATGCACCCCAAGGCCCCAGTCCTGCTATCCAAGATCTGACTCAAAAActtcaaacacaaacaaacaataggGTCCACGTGCTTCATTCCCATTTAAAGGACCAGACCACATGTTCTTGTGGATTTTATTGATGATCTGattgtttttgaaacaaacaTGATTATCCTTCCTTAAATACAAGTGTCTTTTATATACATGAGCATGTATATAGAGAAAgatttgaaataaattgctaataGTGGAAGTTACATGAAGTTTTGAGGATCTGATTTGTactttaaaatgtctaaaatctaAAGCAAGAGCAAGAAATCAGAATCTGTAcaccaaaatgtgtatatattttacttATGTCGTGTGAGTGAtgttttattccatttttaacttgatttttttttacaaagttttataaataatatataatatgttgttgtaatataaaaatgtatttgtctgTTTGCAAATGTGTCTCATTAAAGCAATGAAAGAAA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041008-74 No description available

Ensembl:

ensembl_id ENSDARG00000054128

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023978 True 3728 mRNA 0.39 4 28607417 28612851

Neighbor

gene id symbol gene type direction distance location
XLOC_012163 BX465838.4 coding downstream 76835 28530467 ~ 28530582 (-)
XLOC_012162 htr1d coding downstream 409318 28166859 ~ 28198099 (-)
XLOC_012161 kdm1a coding downstream 505428 28082441 ~ 28101989 (-)
XLOC_012160 ptafr coding downstream 631386 27971144 ~ 27976031 (-)
XLOC_012159 ythdf2 coding downstream 1187918 27407918 ~ 27419499 (-)
XLOC_012165 BX465838.1 coding upstream 11197 28624048 ~ 28624176 (-)
XLOC_012166 BX465838.2 coding upstream 30607 28643458 ~ 28652512 (-)
XLOC_012167 ap4s1 coding upstream 91120 28703971 ~ 28707970 (-)
XLOC_012168 coch coding upstream 130810 28743661 ~ 28749640 (-)
XLOC_012169 opn6b coding upstream 147735 28760586 ~ 28770800 (-)
XLOC_012158 NA non-coding downstream 1203666 27402643 ~ 27403751 (-)
XLOC_012152 AL928908.3 non-coding downstream 1621658 26982035 ~ 26985759 (-)
XLOC_012151 NA non-coding downstream 1639076 26950412 ~ 26968341 (-)
XLOC_012147 AL928908.2 non-coding downstream 1804681 26783926 ~ 26802736 (-)
XLOC_012172 NA non-coding upstream 308721 28921572 ~ 29022679 (-)
XLOC_012176 NA non-coding upstream 603215 29216066 ~ 29224911 (-)
XLOC_012179 AL845481.1 non-coding upstream 660112 29272963 ~ 29273081 (-)

Expression


Co-expression Network