XLOC_012181 (ush2a)


Basic Information

Item Value
gene id XLOC_012181
gene name ush2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 29376854 ~ 29771639 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024003
ATGACCATCATTACTTATTTAAGATCACTACATCAGGAGGCAACCTCGCCACCAACAACGAATTGGCTCCTTGGGCACAAAGGTGCTATGTTATTACTGTACACCTTGGGCTTTTATGCCTCCCTCAGCCTGGTTGCCCCTCAGGGCAACTTCCCCAGGCTCGAGAACATAGGGGCACATAAATCTGTCAGCACCACACCAGCGAGAGCCACGTGCGGGATTCCCGAAAGGAGTACTTTCTGTCAAGCTGGCCAGGTTCAGGAAGATCTCCTCACTTGCATCCAGAAGTTCTGCATCCAAGAGTGTCCTCGCAGGCCTTCTACACCCGAATACATTGATGTTCTCACCGTAAACGTGGCCACGTGCTGGAAGGGCGATGCACGGGACCTTCGGCCAGGCGCAGAGGCCAATTCCAGCAGCTTCGTCTTTCCCACTTCAAAAGGTTGTCCGGCTTCCCCCTCGACTCTAGGCTACAGCCCAGCGAGCTCATTTACTTTAACGGTGTGGCTGAAACTCGAGCAAGACACTGTAATGACTTTAATAGAAAAGAGCACCGTAGAGAGACTGGTGCTGCTGGTGACAGTCTCTGAGAAAGATATTCAGATCCACTACGGGATTCAGAGCATAAGCATGAAGACTGCAGGTCACATTAGCATAGGCCACTGGGCACACTTGGCTCTACAGATACATGAAACAAGTGTGAGTTTATTCTTAAACGGCAATGAGGAGGATGGCACAGCTTTGGACACACAAACCCTGGCAGGACTAGTTGATGACATCACATCAGATGGTGCTGTGTGGATCGGCAGGAGTTCCAACGGGTCAAATCAATTCATTGGAAGGATGCAGGATTTTAGATTTTATCCGAAGACATTAACCAACAGGGAGATTGAAGAAGTGTACACTGGACAATTTCCTCACCTTCACTCCCAGTCGACATGTCTCTGCCCCGCCAGCCATCCCAGAGTGCACCCCCTAGTAGAGAGGTACTGCATCCCCAACGCAGCCAATGATACCACCCATAACAAAGTGCTTCGGCTGAACCAGGACGCCCACCCATTGGATTACATTAATGACAATGACATCGGAACCACCTGGATATCCTCCATCTTTCCCTCAATAGAGCTACTGGACAAAGGAATAACCATCACTATAGATTTGGAGAATGGCCAATATCAGGTTTTCTACGTGATACTCCAATTCCTCAATGCTCAGCCCGAAGCGGTCCGCATTCAAAGGAAGACAGTCGGGAGCTCAGAATGGAAAGACTGGCAGTTTCTGGCCAAGAACTGCAGCTACTTTGGCATGGAGGATAACGGGGCTTTGGATCGTCCTGATTCTGTAAACTGTCTACAGTTGCCCAGtGACATACCTTACTCCCGTGGAAATATCACCTTCAGCATGCTAACACCTGAGCCGAACCTACGCCCGGGCTACAACGACTTCTACAACAGCGCCGCCCTGCAGGAGTTTGTTAGAGCCACACATGTTAGAATCCAGCTTCACGGCCAGTACCATACTCAAGATGCCACAGTTCCTTTCCGCCATCGCTACTACGCTGTGGATGAGATCACCATCAGTGGCAGGTGTGAGTGCCATGGACATGCAGACAGCTGTGACACTAGTGTGAGTCCGTACCGCTGCGCCTGCCTCCCAGAGAGCCACACACATGGAGCTAATTGTGAGCGATGCATTCCTCTCTTTAATGATAAGCCCTTCAGGCCTGGAGATCAGATTCAAGCGTTCAACTGCAGGCCCTGTCAGTGCTATGGCCACGCGTCTTCCTGCCATTACAACTCCAGCCTGGACCCTCACCCTGGAGAGCACTTCAGAGGAGGTGGAGGAGTATGTGACGACTGTACTCATAACACCACAGGCAGGAACTGTGAGCGCTGTCGGAGTCTCTTCTACAGGGAAGTGGGTGCACTTTTGTGGGCCACAGACGTCTGTAAAGCATGCGAGTGCCACAGCGCAGGGACCATCAATGCCAGTTTACATTGTGAGCCGATCGGGGGCCAGTGTAAGTGCAAGCGACATGTGTCTGGCAGACAGTGCAATCAGTGCCAACACGGATTCTACAAGCTGCAGTCGGCGCTGGCTGACGGCTGCCGTGCCTGTAACTGCAATACCGCCGGGACCGTGCAGCCAGATATTACCTGTCACCAGGACTCAGGTCAATGCCAGTGCAAGGCAAACGTAATCGgtcTAACCTGTGACCGTTGTAACTATGGCTTCAAATTCCTCAATCACACCAATCCCGATGGTTGCATTTCCTGTGGCTGTGACCCATGGGGTTCTCTGCACCAGTTCTGTAATCCCTTCACTGGACAGTGTGAGTGCAAAGCTGGTGTGCGGGGCCTCCTCTGTGACACTTGCATCCCTCATTTCTACAGTCAGAACAGCAGTGGAGTCTGCCTGCCCTGCAACTGCAGTCTGAACGGATCTGTTCCCGGTACCTCCTGTGATGCTGTAACAGGGCAGTGTAAGTGCAAACCTCACACAGAGGGCCGGCGGTGTGACGTGTGTCGAGATGGATACCACAGTCTGGACCGCAGCAACTCTTTGGGCTGTTTGCCTTGTCAGTGTGATCTCAGAGGCACTGTGAACGGCTCAGGTGTGTGTGACAAGACCACGGGCCAATGCCTGTGTAAAAACAATGTAGAAAGCCTAAGGTGCAATCGATGCTCTGCTCACACCTACAACCTGAGTTCTGCCAACGCTACACATGGATGTCAACCATGTTACTGTGACCACATAGGCACTGTGCCTGCAACTGTGTGCGACCCTGTAAGTGGTCAGTGTATCTGCCTACCCACACGCTACGGCCGGGACTGTGGAACCTGTAAACCAGGTTTTTTCCTGTCCGAGGCGGGGCTGAGCGAGTGTGAAGTGTGTGAATGTCACTCGGTCGGAGCGATGGGGCAGGTGTGTGCTGCCCACtcagggcagtgtgtgtgtgctcacccATCACTGACCGGTCACAGATGCGACCAGTGCCAGGATCTCTTCTTTGGCTTTAATCCAAGTGTTGGCAGGTGTGAGCCATGTGGCTGTGATCCTGTGGGAGGATTCAATGGCACGTGTCACCCCCAAACAGGGCAGTGCTTGTGCAAGCCGTTTGTGACTGGGGATAAATGTGATGCCTGTGTGGAGGGAGCCAGTTTCATGGATCCAAACAACTACCTGGGCTGCAGCAAAGATCCGCAACAGCAGCCTCCTCCTCTTGGCCGGGTTTTGAACTCCACCACTATAGAGCTGAGCTGGAGAACTCCTGATTCCCCCAACAGTAATGCACTAATGTACACGCTGCTCCGAGACACACAGATCATCCACGTCAGCCACAGTCAGCATCCGTTTGGAACTATGCATTTCATAGACACAGCTTTGTCTCCCTACACCTTATACTCTTACCAGCTCATCACCAGTAATATCCGCTCTAACACCAGCAGTTCCGTGGTCACCTTGCGTACCCTGTCTGCCGTACCCGAGCAAGAGGAGCTCCAGTTAACCCTCGTGGGCCGAGCCAAGCCGAACAGTGCCTCTTTTAACTGGACAGAGCCCTTGAACACCACTGGTCCAATAGACAATTACACACTGAGCTCCATACAGGATCTGAGCGGAGAAAAGAGAATCTACTACACTGGACTTCAGACAGAGGCCACCGCTGAGGAGCTGCAACCTTTCACTCGATACAACTTCAGTCTGAAGGCTTGTACTGATGGAGGATGTGCTCGCAGTGAAAGTCTGGTTGTGCAGACTGCTCAGATACCTCCAGAGCAGCAGCCGGCACCCAAAATCACAACTTTAGGCTCCTCTCAACTCAAGGTGGACTGGGAACCGCCAGTTTTACCAAATGgTATAATTATCAGGTATGAGCTTTTTATGCAGCTGCTGAATGAGTTGCAGAGAAACGCCAGCAGTTATGGTACGGAGCAAAGGGTTTTTCTCAGTAGCGGCTGGCTGAACCCACGGCCGTCGTTGAGTTCAGCCAATGAGAACGCTCTTACTCCACCTGAGAGCACTGTGGTGGTGTCCAATCTGCAACCATTTTCCACTTATCGCTTCAGAGTGCTCACTGTGAACATGGCCGGCAGTGTCCTGTCAGACTGGGCTGTGGGACGAACTGCAGAGGGAGTGCCAGAGTACATGGCCCCTCCTCAAGTGTCCGCTGTGTCCTCGTCCTCCCTCAGAGTGAGCTGGGAGACGCCACGGGACAAAGACGTCAGGGGCGAAGTGACTGAGTATAGAGTCAACCTTCACCAAGAACAAATGTCCAACCCATACGCTCCACCTATAGTAACACAGGTACTGTACAGTGGGTCAGCACAGGAGCATAGCTACACTGCGGGAGGACTGAAGGCCTATGAGGAGTACAGTTTCACGGTGACCGTCTGCAACAGACAGGGCTGTGTGAGCAGTTCACCTGCGTCAGGGCGAACTCTGCCCTCAGCTCCTGCAGGTTTGAGGGCCCCTGGATTAAGGCCGTTGAATATGACTGCGATGAATGTTTTCTGGGATGCCCCAGCTGAGCTCAACGGGCCTCCTCCTCTGTATCATGTGGAGAGGACGGATGTGTCTTTGTCTGATGCCCAGGGTCAGGTTATAAGAGGGAGACGCTTCACGGGGAGTGGCTTCTTCAGGTTTCCCAGTGCTACTCTGCCTGTCAATGCTGACTTTACAGGCTTGCAGCTGAGTTTCCGGACACGCGCTGAGGAGGGGCTTCTGCTGTTCGCTGTTTCCCCTGGAGAACAGGAGGAGTATGTCGCTCTGCAAATACACAACGGCCGCCCGTACTTCCTCTTTGACCCTCAGGCCTCAGCCGTGGCCCTCAGCCCTCGCAACGATGGAGGTAGACGCTATAATGACAACCAGTGGCACCATCTGATCGCTACCAGGAAGCAGGCCGTGGGAACAATCATTGTGGACAATCAATACAGCGGATCAGCATCAGCTACAAGTGGGAGCACCATCATCGGGCAGAACACTGGGGTCTTTATAGGAGGGATTCCAGAGAATTTCACTATTCTGAGACAAGACGCTGGGCAAGCAAAGCTGGTGCAACAGGGGTTTGCTGGGTGCTTGAGGGATGTTTTGGTTCAGAAATCCAGTGGCGCTAATGAAGCTTGGGAACCTCTGGACTGGGAATCTGCACTAGAAACACATGAGACGTATGAAAGCTGGGAGGGCTGTCCTGCTGTTTCTGAAAATGGGGCATACTTCCTTGGACATGGGTTTTTGAAGGTCAAGCCGGAAATACTGACTGGTGGcaattattttgaaatatcaTTTGAGTTCAAAACCGATCAGCTAAATGCGCTTCTGTTGTTTGCCTATGATATAGATGGAAAAGACTTCATTTTGGCGGAGCTGCAGGGTGGAGTTCTCTTCTGGGTGTTGCGCTGGGGTGAGCAGACGGTGGAGTTGAGTGTATGGGTGGGTCTCTCCTACTGTGACGGGGGCTGGAACACTTTGAGTGTCCTGAAGAGGGGACATTTAGCGAGCGCTGGTCTCAATGACATGTACGAACAAGAGAGGAAGGCCATAGGCGGCCCTCTCACCATCAGCTCTCCACTTTATATTGGGGGCGTCCCACCTGGAGTAACACACCCTGCTCTGAACAAACACAGCCTTCTGCATGGTTTTGGCGGCTGCATCAGGGATGTTAGATTGGCGCGCGGGCCTGTCGTGAGCTTGGCGGCCGTGTCCAGCAGTGCTGTCAGAGTCAATCTGGATGGATGCCTGTCAGCTGACACCAGCGTTAACTGCAGGGGAAACGACTCCATTCTGGTGTACACGGGCAGAGACAGGAGCGCAGAGGACCTGACACTGCAGCCCTTCACGGAGTATTTGTACAGAGTGATGGCATCTGGAGAAGGAGGTTGGATAGGTGGGCCGTGGCAGCGTGGGCGGAGCAGAGAGACAGTTCCACAAAGTGTGCTGCCTCCCTCCAGAGTTGGCAGTGTAAATGGTTCGAGCGTGGAGGTGAGCTGGGAGGAGCCGGCTGAGGTCAGAGGTGTAATTGAGAAGTACGTACTGAAAGCGTACAGCCGGGACCGTCCCTCCTCGTCCCCCATCAGCGCCACCTTCCCCCACTCTCAGCACCTGACAGGCACTTTAAGTGGCTTGGCTCCTTTTAGCAGCTACAGTATTACCCTAACGGCGTGCACTCAGGCCGGGTGCAGTGAGAGCCCATTCGCCACCGGTTTCAACACTCCACAAGAGGcTCCTGAAGAGGTCCCACCACCTGCTGCAGTCTCCTACCCCAACTCTCTGTCTGTCCACTGGAACCATCCACCAAAACCCAATGGCATCATCATCCAATACATCCTTTACAAAAACAATACTGTCCTGTACAGAGGCAACAGCACCAGCTTCAATATCACAGACGTTGGTGTGTTCACTCCTCATAAGCTGCTGTTGAGTGCCTGTACTGAGGCAGGATGTACCAACAGTACCCAGGTTACCCTGTTTACAGGCCAGTTGCCTCCTACTTATGTTGAGCCCCCCATCCTGACCGTGTTGGATGCCCGCAGTATCCACATACAGTGGGCTGCTCCAGTGGAGGTGAACGGCCTGCTGGAGTTCTACACGCTGCACCAGTGGGCTTTGGGAGAGGAGCCGCTCATCGTCTATAACAGCTCTGAGCTTTTCCAGGATTATACAGTGCGGAACCTCGTCCCTGGATCCACATACCTCTTTCAGATAGCAGCGTGCACAGGTGGCGGCTGCACCCTCAGTGACCCCAGCACAGCCCGCACCGAGGAGAGCTCACCGGAGGAAGTGCCTGCCCCAAACATCCTGTCCCtctctccacattccctccaccTGTCCTGGACCCCCCCGCGCAAACCCAATGGTGTGATTAGCAGCTATGGTCTTTGGATGGATGGCACGCTGGTGCAGAATTCGTCCCTGATGGCTTCGGAGGTGGGCGATCTCTCCCCGTGGAGCCTGCACAGTTTCCGTGTTCAGGCCTGCACGGCTCAGGGCTGCGCTCTGGGGCCCCTGGTGGAAAGCAGGACTTTAGAGATGCCCCCCGTTGGCCATGTGACCCTTGTTGTCTTCAGCGAGACGCCACATTCAGTACGAGCCAAGTGGGAGGCTCCCGCTGAACCCAACGGCAATCTAACCTACACAGTCCTCTTCGCAGGGCCAGGTCAGAACTTCAGCAGTTTGGACACACCGGACACCGAGATGAGAGAGCTGCTCAGCACTGGTAAAGAGGGCCAGTGGGTGTCCATAGGAGGATTGCTACCGTATTCAAATTACAGTGTGATGGTGAAGGCCTGCAACAGTCTGGGCTGTGTGGAAAGCTCTCCTGTCAGCGTTTCTCTCCCACCTGGAGCTCCAGATGGTCTTCTGGCCCCCAGGCTGGCAGCTGCCACCCCCACCTCGCTGCAGGTGTCCTGGGCTGCTCCAGCCCGACACAACGCTCCCGGAGCTCTGCGTTACCGGCTCCAGATGAGGAGCTCCGCGTTAATGGACGATGAGACGACCACCTTCAGTCACACAGTGACGGATCTGGAACCTTTTACCGAGTATCACTTCAGACTGCTGGTGTCTAACAGCTATGGAGAAACCAGCAGCCCCTGGGTCTCTTTGTTTACTGCACAAGACAggcCTGGAGCAGTTGACCCACCAGTCCTCTCTGACATCCAATCCAGAAGTGCTTTTATTTCCTGGTCTCCTCCATCTCAGCCCAATGGCATCATCACCCATTACAACATCTACCAAAATCGGCAGCTAACTACCAGTGTACCAGAAAACAGTACCAGCCACATGCTTTCTCATCTAACACCCTTTCAGCAGTACACAATTCAGGTAGAGGCCTGCACCGCCGCCGGCTGCACACTTTCAGCCGAGTCCCACACTATAAACACCCCTCCAGCGCCCCCAGAGGATGTTCCGGCCCCACAGCTTTACTCTGACACCCCCACATCAGTGCTGTTGTCCTGGGCCGCACCACGTCTTGTCAACGGGGAGCTGGATGGCTATACCGTGGAGAGGAGAGTCAGCGGCACCCAGGAGATCTCTACTGTGGCCACTATACAACCCAATCAAACTCTTACTTACCTGGACAGCTCCGCCACACTCAGCCCCTGGAGCTCATATGAGTACCGTATTGTGGCACACACCAGGCTAGGGGGATCCAATAGCAGTGTGTGGGAGAAAGTGACCACCAGGCCTTCAAGACCTGCAGGCATGCAGCCGCCTGATGGGGTGGTTTTAGGACCCGAGTCAGTGCAGGTTACATGGGCCGCTCCTCTCATACCCAATGGAGAAATTGAGCGCTATGAGATCCGAATGCCTGAACCACGTATTCCGCACACCAATATGTCTTTGCTCACCCACACTGTTTCTGGCCTGATGCCCTACACCGGCTACAGCATCACCATCCTGGCTTGCTCTGGAGGTGGAGGTCACGTTGGAGGCTGCACTGAGAGCCTTCCAACTCTGGttactacattacccacaatcccTCAAGGCCTGTCGCCCCTGTCGGTAGTCGCAATCAGTGAGTCTTTCCTGGCTGTTTCTTGGCAGCTCCCATCAAGGCCAAACGGGCCCAATATAAGATTCGAGCTGTTGAGACGGAAAACCCAGCAGCCCCTGGCCTCCCGTCCCCCCGAAGATTTCAATCTGTGGTACAATGTTTACGCAGGAACCAAATTGTTTCATGAAGATAAAGGCCTTAGCAGGTACACTTGGTATGAATATAAAATTGTGGTTCACAATGACGTTGGCTCCGCTTCAGGGGAAGTTGCCACTGGGGTTACACTGGCTGGTCAACCGCTCAAACCCACCAACATATCAGCCCACGCTCTCAATCATACAGCCATCTTGGTCAACTGGACCACTCCCACTCTGCAAGATTTGCAGGGAAGTGTGGAGGTTTACATCCTGACGGTTGTATCTGACCAGCACAGCCAGACTCTTACTCTTGACCCCACTGTGACCTCTGTGTTCATCCCTGACCTGCAGCCCAGCACTCAGTACAAGCTTTCACTCACTGTGTCTAACGGCCCTCACAACATCACCAGCCCTGAGGTCAACTGTACGACTACTGACGGAGAACCTGAGGGTGTTTTTCCTCCAGAGGTGTTGACCCTGAACAGTACAGCAGTGAGGGTGATGTGGGCGCCCCCTCTTCTTCCCAATGGAGTAGTCGTTCAGTACTCCATCTATCTGGACGGCCGGCTCTATGGCTCCACTGGCAATGAGTCCGGTTCTCTGGAAATGGGAGGACTGTTGCCATATACTGTGCACAGCATTCAGGTGGAGGTGTGCACTGTGTACGCATGTGTGAAGAGTAACAGCACTCAGGTGACCACAGTGGAGGACACTCCAGCTGAAATCTCCACACCTCACATTCAGGTGCTCAGCTCCAGATCAGTTAAACTAGAATGGACATCACCTGGTCGGCCCAATGGCATTTTGGGAGGGTATGACGTGTGGCGGAGGACTCTGAAGCGGTGTGAGGATCTGCAGACCCAGCAGACATTTGCTCCTCAGAGTCGCTGCTCGTACCTGGAGTGTCCTGCTGAACAAGACTTCTGTGGAAAGACTTGTTATAACCCTGAGATGCAGATTTGCTGCTCAGGGACCGTTCACAACTTAATTCAGTCTCATCAGTGCTGTGAAGAGCGATATATTCCTGCTTCAGAGGATTCAGGGAGTGTGTGTTGTGGAGGTCAGTTTGTCCAGCCTCTGTCTCAACACCAGTGCTGTGGTGGATATCACGTACTTGTTTCACCAGGAGAGGTCTGTTGTCTGGACTCTGTGGAGCAGCGTGTATCAGTGGGTCTCGGGGACTCGTGTTGTGCTGGGCGTCCTTTCGTCTCAGGAGTGGGACAGATCTGCTGTGGGGGTCGTCTGTATGATGGCTTCAAGTCCCAGTGCTGTGGAGGACAACTAGTCCCTAGAGAAACAGAGTGTTGTGGGGATGAAGAAGAAGGGATATCCTATGAACATGTGTCAGGATTCAGCTGCTGTGGTGAGCACTACATCAACACATCTACTTCTTGGTGCTGCACGGGTCCCGGTGGCGAGTCTAAAGTCCATGTGGTGGAGAACCGGACGGCGTCACTGAAGTGCTGCTGGTCAGAAGTGATTGATCAGGAGGAGCAGTGCTGTAATGGAGTGGGCTTCAATCCGCTCACATCTGTGTGTGCTGACAGAGCCCCGGCCGGCATCCTCATCCCGGAGAAGTGTCGTCCCAGTACGGTGTGTCCTGTGTCGGTGGCTGCAGGATCGTTCTGCGGCTTGTGTGATTTTAGCCCGACGCAGTCCATCTGTACATGGGTACCGAGCGGGCAGTTCCCCGAACACACTCCATCTTCCTCTGCTGCTGCTGAAGCTCCGTCTGTTGTCGCTCACAGTCAGCTCTGCCCATCCTCAGAGGAGCTCATATACAGTGGAGTGGCAAACCGACACACTTTCACAGACACTGAGCTGGAGCCGTACAGCAGTTATGAGTATAGGGTTGGTGTGTGGAACAGTTTTGGCCGTGGGTTCAGTGTCTGGACTCGTGTCAGGACAGATGAAGATGTGCCCTACAGTGTGTCTCCTCCGAACTGGAGTCATGTGGGTCTGCGTGATGACATCATCCAGCTGGAATGGTCTGCCCCAATCAAACCCAATGGTGAGATAAGTCACTATGTTATCCTGCGTGATGGACAGGAGCGCTACAGAGGCACTGATCACAGCTTTACAGATGCAGGAGGAATCCGGCCTTTTCAAGAGTACATTTACCAGCTCAGAGCCTGTACTTCTGCTGGCTGCACAGACAGTACAAAAGTTGTGGCAGTGACTGTCCAGGGTGAGCCAGAGGGAATCGGCGCTCCTGTGGTGAGAGCGTTGGGGCCTGGGGCCCTGAGAGTCAGCTGGGACCCTCCAGATAAAGCCAATGGTGTCATCAAGGAGTATCGCATCAATCAGACTGGCGTTGGAGTCATACATACACATACGGAGGGCGTGATGGCTTACAATGTCACAGgTCTGCAGCCTCACACCAACTACAGCTTCATTGTgatggcatgcactgcagcaggATGCGGAGCGAGTCAGCCATCTATGGGTCAAACAATGGAAGACGCACCTGCAGGTGTGTGGTCAATGCCCAGACACATACAGCTAAACTCCTCCGCGGTGGAGCTTCACTGGAGTGACCCCCTCAAACTCAATGGCCTGCTTTCTGGCTACCGGCTGCTGCGGGACGGAGAGCTCGTCTTTACCGCCGACGGAGGAAAGATGAGCTACACAGACGCTGGCCTGCAGCCCAACACCAGATATGTGTACGAGTTGGAGGCCACCACCGGCGGCGGGAGCAGTCGCAGTGATAGATACGTCATTCAGACCCCCATCTCCTCACCGGAAAGGATTCCTCCTCCATATAATGTCAGCCTCCATGGCCCTCGCTCCGTCTTTGTAGCCTGGTCACCCCCAGGTGTGTATAATTTAAGTTTCCCTTTGGAATATAACATCCTGCTCAACGCAGGCACTGAGCGGCCACTCATTCGTTCTGCTGGACTAGAGCAATTCCTGCTACTGCAAGGACTGGACCCCTATACCATCTACCATGTCCAAGTACAAGCCTGTCAGCCAGATGGTTGTGGTGTTGGACAAGGGGTGACAGTTCGGACCCCTGAGGCTGCTCCGATAGCTCAAGACCCTCCAGTTACTACTGCTACAGGTGCAGCTGTTATTGAGGTCCGCTGGAGTCCACCGCACAAACCCAATGGCATCATCACTAACTACTTCATATACAGACGACCAGCTGGAACTCAAGAGGAGCTGCTGGTGTTCATCTGGACTGAAGGTCCTCTCGAGTTCATCGATGCCTCAGACTCTCTTCATCCATTTACTGAATATGAATACAGAGTCGCTGCTGTCAACTCTAAAGGCTCTGCCTCCAGCTCATGGTCCTCCATCCGCACTCTAGAGGCAGAACCGCAGGGCATGAATGCACCCTCAGCCCATCCCACCAGTGCCTACTCTCTTCTGCTGAGCTGGACTCAGCCGAACGCCCCAAACGGAGTGATCCTCGTGTACAAAGTGGTCTACCAGAAACCACCCAGCGATCCGACATTCAACTCTACAACTGTTACTGCTCTTACAGTTCTGGGTAATGTTTTTCAGGCTTATGTGTTTGGTTTAGAGCCTTACACCACATATAATATTCGTGTGGAGGCAGTAAATGGAGCAGGTCAGGTGTCAAGTCCCTGGACCACCATTCGAACCCTAGAAGCCTCTCCGAGTGGCCTGGCCAACTTCAGCGTTGAGAGAAGAGAACATGGCCGAGCTCTGCTGCTGCAGTGGGCAGAACCTGCTTCTCCTAATGGAGTCATCAAAATGTACAACATCTTCAATGAGGACAACTTGGAGTTTAGCGGCCTCGCACGCCAATTCCTCTTCCGCCGTCTGGAGCCCTACACAGTGTACACACTCATTTTGGAAGCTTGCACTGAAGCAGGCTGCACCAGATCTGCTCCTCAACGGGTCACCACAGAAGAGGCCATCCCATCCTCTCAACCAGCCCCCACAGTCTATCAGGTACATTCCCGCAGTGTGGAGCTCTTCTGGTCTCCACCAGCCCAGCCCAATGGCAGGATCCTGCAGTACCAGCTTCTGGCTGTACGTCTGGAGGACGGCAGGGTGCGCAGTGATGAAGATGACTCCTTGAGAGCCAAGATCGTCTTTATCCAGAACAACACCCAGGCTAACAGCTTCTCCTATAATATGTCTGGCCTCCTGCCCTGGAGCAGGTACAAGTTTCGTGTGCGTGTCTCAAATGCGGCAGGGTTTACTGATAGCCCCTGGCTCACGGTTCAAACCAAACAAGCTCCTCCAAGAGGACTGGCTCCTCCGTCTGTCAGTCACATAGAGGGCAAGCCTAATGAAGTCTTCGTAGCTTGGACGCCTCCATTGGAGCCCAATGGGGTTCTTCTCACCTACAGGATTCAGAGGGATAACATTGGCTTTCATTTCAGCTTTGATTCGAGTGTGTTCAACTACACAGATGTGGATTTAAACGCATACACTCTCTACAGTTATGCAATCATTGCCTGTACCGTGGCAGGATGTGTTACAAGTGGTCCGACACAAATCAGGACGCTAGAAGGCGCCCCTGCTACTGTGGATTCTCCTATATTGTCTGACATCACATCCTATTCACTCAATGTGTCTTGGACTGTTCCATCCTTCCAGAATGGGGAGATTGTGGTGTATATTCTCAAAGTTAACAATGATGAGGTCTACCGTGGAAAACGGTTAAGCGTTCAAGTTTTGGATCTTCAGCCTCATGTTTCCTACAGCATCATCTTGACGGCCTGCACCAATGGAGGCTGCACTTCGAGTTCTCCTATTCTAATACAGACAAGAGAAGCTCCGCCCTCAGGGATGCCTGCTCCTACTCTTAAAGTCACAGGTCCTGAATCAGTGGAGGTCACATGGAGAGAGCCTGTTCATCCTAATGGAGTGATCATGGGATACGAGCTCCGTCGAAACGGGAGCCTCATATACACTGGTACTGACACTCGTTATCATGACTTCACCTTGCTGCCCAGCGTGGAGTACAGCTACACCATCACTGCCAATAACAGCGAGGGCGCCACTACCAGTCCTCCAGCGGTGGCCCGCACTCAACCATCAGCGCCCTCTGGTGTTGCTCCACCCAGATTACAGGCTCTGGGGCCATTCAGTGTTATGGTGAAGTGGGACCCTCCTGCAAGACCTAACGGTGTCATCATCAGTTATTCGCTTTACAAACGGGACCCAGCTGAGAACAATGTGAAACGTTTTGTTTTTGCGTCACACCACAGTGCCTTCCAGAGCCGGAGTTTCTCTCTCAACACACTAAAGCCCTACTACAGATATGAGGTCAGAGTGGAGGCCTGTTCTCTGTTAGGCTGTGCTGCCAGTGACTGGTCTTCAATACAGACGCTTGAATCGCCCCCTGCTGGTCAACCTGCCCCATTGCTGGAGCTGCAAACCAACCCTAAAGGCCTACAGACCGTCTTTCTGCTGTCCTGGTCTCCTCCCACCGAACCCAATGGGAAACTTCTGCACTATGAGCTCTACCGAAAACACCTCTCAGACATGGAGAGCAGATCTGTAACTACACTGGTTTACAGCGACTCCTCAACCTCCTGCCATGATGACAAACTCCAGCCCTACACTGCCTATGAATACCAGGTATGGGCTGTAAACTCAGCAGGTCGTGCAGGGAGTCCGTGGGCTCAGGGTCACACAGGTCCAGCTCCTCCAGAGGGCATCAGCTCACCTAAATTCCTGTACATATATTCCACCTCAGCTGTGGTGGATATCAGTCCACCAACAAAACCAAACGGCATCATCAGTCTCTACAGAGTCTTTGCACAAAACAAAGACTCATACCAGCTGCTGTCTGAGGGGACGTCCCACCAGCAGACTCTCCATGGTCTCAGGCCCTTCACAGTGTATTCTGTTGGCGTAGAGGTCTGCACCTGTTTCCTGTGCTGCAGTCGAGGTCCCCTGAGTGAACTCCGCACCCAGGCCTCTGCCCCGGCACAGCAGCCCCCGCCACGACCCATCGCCCTCACTTCCCGCTCAGCTCTGGTGGAGTGGGACATGCCTCTTCAGCCCAATGGCATCATTGAGAGTTGTGAGCTGCAGGTGCGATTGTCCTGTCCTCAGCCCCCACAGCCTGTTCCTGTACCCTGTGCCATCGGCCCTGTGGAAGTTAAGTTCTTCGGGATGGGGCAAAGTTTCAACATCAGTGGCCTGCTGCCCTATGCCAACTATGAGCTGTGTGTGGTTTCATACAATAACATGGGCAGCACTGCATCTGACTGGGTCTCCATCACCACACTCAAAGAACCTCCTCAGTATATGGAGGCATTTGTGGTGCACAGTAACCTGACCTCAGTGTTTGTGGACTGGAGTGGCTCTTTCTCTCTGAACGGGCCTCTGACAGAATACAGTCTAACCGAAAGCAGCCTGCGCGTCTACAGCGGCTTCCACAGTTTTCTACACATCCCACGCACCTCGGATAAAACCTTTGCATTCCAAGTGACCTGCACCACTGACAGTGGCAGCGCCAGTTCTCCTGTCATTAAATACAACACGGCCACTGGTATAGATGCTGTGGAGTCCAGTTCGGGAGGTAAAACTGGGCTATATGGCTCTGAGTACAAGTTCTACACGGAGCTGTGGTTCATCATTCTGATGGCGCTGGTAGGGCTGCTGCTTCTGGCTCTGTTGATGGGTTTGGTGCTGAAACGAGCCCTAAGCAAACCTCCCTTCATCAGGGAGAGACCTCCAATAATGCCCCTGCAGAGGAGGAGCACCAAATATCCACCCAAAGACTCCTATCTGTTTGACAATATAGCGGACTCCTCCTGCAGTATAACTCTAAAGCGCTTTGCCATGCGCACTGAGGGTTTGACTGATACTAAGATCGGAGGTACGTGCACCAGTAACCACAGCTATCAGGCCAGCATGTCTGTGCTGCGTGTGCCCAGTCAAAGCCAGCTGAGCCATGCCTactcccagaattccctgcatcgAAGTGTCAGCCAGCTGATCGACACTCAAGATAAGAAATCATGGGACGCAGACCTGCATGCCACTGACAGCGGAATGTATGTGGGGGATGAGGACTTTGGAGAGACCATTAAAAGCTACAGCTCAGTTAAGAAAGAGCAAACCATGTTTACAGACACTCACTTGTGA
>TCONS_00024006
CACTAGTTGTTATGGATTCTGCACACCGTCTTCAATAGCGCCCATTgactttcctttcttttttctccCCAGGGTCAAATCAATTCATTGGAAGGATGCAGGATTTTAGATTTTATCCGAAGACATTAACCAACAGGGAGATTGAAGAAGTGTACACTGGACAATTTCCTCACCTTCACTCCCAGTCGACATGTCTCTGCCCCGCCAGCCATCCCAGAGTGCACCCCCTAGTAGAGAGGTACTGCATCCCCAACGCAGCCAATGATACCACCCATAACAAAGTGCTTCGGCTGAACCAGGACGCCCACCCATTGGATTACATTAATGACAATGACATCGGAACCACCTGGATATCCTCCATCTTTCCCTCAATAGAGCTACTGGACAAAGGAATAACCATCACTATAGATTTGGAGAATGGCCAATATCAGGTACAAATCTACCAATGAGTAGCTTAGGGTTTGTAGATATTTAGCTTAATATAAAATAGCTTAATATTACAGTAGTTTAGTTTCTTGGAATCAAGAGTAGTATTTCACTCATTAATCCCAAAGTATCTTCAAATGTATGTTAGTACACGCACAACC

Function

symbol description
ush2a Acts upstream of or within eye photoreceptor cell development; response to auditory stimulus; and sensory perception of light stimulus. Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Predicted to be active in basement membrane. Is expressed in eye and photoreceptor cell. Used to study Usher syndrome type 2 and Usher syndrome type 2A. Human ortholog(s) of this gene implicated in Usher syndrome (multiple); nonsyndromic deafness; and retinitis pigmentosa (multiple). Orthologous to human USH2A (usherin).

GO:

id name namespace
GO:0034446 substrate adhesion-dependent cell spreading biological_process
GO:0016477 cell migration biological_process
GO:0042462 eye photoreceptor cell development biological_process
GO:0009887 animal organ morphogenesis biological_process
GO:0009888 tissue development biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0010996 response to auditory stimulus biological_process
GO:0005604 basement membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
ko03036 Chromosome and associated proteins

ZFIN:

id description
ZDB-GENE-060503-794 Acts upstream of or within eye photoreceptor cell development; response to auditory stimulus; and sensory perception of light stimulus. Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Predicted to be active in basement membrane. Is expressed in eye and photoreceptor cell. Used to study Usher syndrome type 2 and Usher syndrome type 2A. Human ortholog(s) of this gene implicated in Usher syndrome (multiple); nonsyndromic deafness; and retinitis pigmentosa (multiple). Orthologous to human USH2A (usherin).

Ensembl:

ensembl_id ENSDARG00000029482

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024003 False 15711 mRNA 0.53 72 29376854 29771639
TCONS_00024006 True 587 mRNA 0.42 2 29732153 29736019

Neighbor

gene id symbol gene type direction distance location
XLOC_012180 tecpr2 coding downstream 64348 29282863 ~ 29312506 (-)
XLOC_012179 AL845481.1 coding downstream 103773 29272963 ~ 29273081 (-)
XLOC_012178 rcor1 coding downstream 105495 29251662 ~ 29271359 (-)
XLOC_012177 traf3 coding downstream 127596 29227502 ~ 29249258 (-)
XLOC_012176 NA coding downstream 151943 29216066 ~ 29224911 (-)
XLOC_012184 esrrga coding upstream 26237 29797876 ~ 29902187 (-)
XLOC_012185 CR377229.1 coding upstream 204370 29976009 ~ 30054157 (-)
XLOC_012186 NA coding upstream 305692 30077331 ~ 30082713 (-)
XLOC_012187 si:dkey-27l15.1 coding upstream 368460 30140099 ~ 30225524 (-)
XLOC_012188 NA coding upstream 506492 30278131 ~ 30280713 (-)
XLOC_012172 NA non-coding downstream 354175 28921572 ~ 29022679 (-)
XLOC_012166 BX465838.2 non-coding downstream 724342 28643458 ~ 28652512 (-)
XLOC_012165 BX465838.1 non-coding downstream 752678 28624048 ~ 28624176 (-)
XLOC_012189 NA non-coding upstream 534576 30306215 ~ 30369525 (-)
XLOC_012190 NA non-coding upstream 627310 30398949 ~ 30409759 (-)

Expression


Co-expression Network